RNA–Protein interactions for RNA: ENST00000606426.1

CUX2P1-201, Transcript of cut like homeobox 2 pseudogene 1, humanhuman

BASIC

Gene CUX2P1, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2P1-201ENST00000606426 TMEM57Q8N5G2 664 aa9.4□□□□□ -0.9
CUX2P1-201ENST00000606426 GRAPLQ8TC17 118 aaPredicted RBP9.4□□□□□ -0.9
CUX2P1-201ENST00000606426 CDC5LQ99459 802 aaKnown RBP9.4□□□□□ -0.9
CUX2P1-201ENST00000606426 DDX19BQ9UMR2 479 aa9.4□□□□□ -0.9
CUX2P1-201ENST00000606426 RTL9Q8NET4 1388 aa9.39□□□□□ -0.91
CUX2P1-201ENST00000606426 CENPBP07199 599 aaPredicted RBP9.39□□□□□ -0.91
CUX2P1-201ENST00000606426 CSF1RP07333 972 aa9.39□□□□□ -0.91
CUX2P1-201ENST00000606426 MVPQ14764 893 aaKnown RBP9.39□□□□□ -0.91
CUX2P1-201ENST00000606426 GPR162Q16538 588 aa9.39□□□□□ -0.91
CUX2P1-201ENST00000606426 TTLL11Q8NHH1 800 aa9.39□□□□□ -0.91
CUX2P1-201ENST00000606426 BCS1LQ9Y276 419 aa9.39□□□□□ -0.91
CUX2P1-201ENST00000606426 ANKRD18BA2A2Z9 1011 aa9.38□□□□□ -0.91
CUX2P1-201ENST00000606426 PLIN1O60240 522 aa9.38□□□□□ -0.91
CUX2P1-201ENST00000606426 GNAI2P04899 355 aa9.38□□□□□ -0.91
CUX2P1-201ENST00000606426 IGHMBP2P38935 993 aaKnown RBP9.38□□□□□ -0.91
CUX2P1-201ENST00000606426 IFIT5Q13325 482 aaKnown RBP9.38□□□□□ -0.91
CUX2P1-201ENST00000606426 CCDC57Q2TAC2 916 aa9.38□□□□□ -0.91
CUX2P1-201ENST00000606426 RABL6Q3YEC7 729 aaPredicted RBP9.38□□□□□ -0.91
CUX2P1-201ENST00000606426 PRPF40BQ6NWY9 871 aaKnown RBP9.38□□□□□ -0.91
CUX2P1-201ENST00000606426 C3orf67Q6ZVT6 689 aa9.38□□□□□ -0.91
CUX2P1-201ENST00000606426 ANKRD18AQ8IVF6 992 aa9.38□□□□□ -0.91
CUX2P1-201ENST00000606426 JARID2Q92833 1246 aaPredicted RBP9.38□□□□□ -0.91
CUX2P1-201ENST00000606426 SUCLG2Q96I99 432 aa9.38□□□□□ -0.91
CUX2P1-201ENST00000606426 PPEF1O14829 653 aaPredicted RBP9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 ZBTB7BO15156 539 aaPredicted RBP9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 RLBP1P12271 317 aa9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 ITGA6P23229 1130 aa9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 RPS8P62241 208 aaKnown RBP9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 FOXO4P98177 505 aa9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 CCDC93Q567U6 631 aa9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 TAF7LQ5H9L4 462 aa9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 LMBR1LQ6UX01 489 aa9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 RTKN2Q8IZC4 609 aa9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 PELP1Q8IZL8 1130 aaKnown RBP9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 PANK1Q8TE04 598 aa9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 MEIS3Q99687 375 aa9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 TNNQ9UQP3 1299 aa9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 CHMP3Q9Y3E7 222 aa9.37□□□□□ -0.91
CUX2P1-201ENST00000606426 ANKRD31Q8N7Z5 1873 aa9.36□□□□□ -0.91
CUX2P1-201ENST00000606426 AAMPQ13685 434 aa9.36□□□□□ -0.91
CUX2P1-201ENST00000606426 FAM161AQ3B820 660 aa9.36□□□□□ -0.91
CUX2P1-201ENST00000606426 SP8Q8IXZ3 490 aa9.36□□□□□ -0.91
CUX2P1-201ENST00000606426 MPHOSPH8Q99549 860 aa9.36□□□□□ -0.91
CUX2P1-201ENST00000606426 BICC1Q9H694 974 aaKnown RBP9.36□□□□□ -0.91
CUX2P1-201ENST00000606426 GREM2Q9H772 168 aa9.36□□□□□ -0.91
CUX2P1-201ENST00000606426 BSDC1Q9NW68 430 aaPredicted RBP9.36□□□□□ -0.91
CUX2P1-201ENST00000606426 COG6Q9Y2V7 657 aa9.36□□□□□ -0.91
CUX2P1-201ENST00000606426 ATP6V0A2Q9Y487 856 aa9.36□□□□□ -0.91
CUX2P1-201ENST00000606426 LRRFIP2Q9Y608 721 aaKnown RBP9.36□□□□□ -0.91
CUX2P1-201ENST00000606426 LAMB2P55268 1798 aa9.36□□□□□ -0.91
CUX2P1-201ENST00000606426 N4BP2Q86UW6 1770 aaPredicted RBP9.36□□□□□ -0.91
CUX2P1-201ENST00000606426 TNRC6CQ9HCJ0 1690 aaKnown RBP9.36□□□□□ -0.91
CUX2P1-201ENST00000606426 C21orf2O43822 256 aa9.35□□□□□ -0.91
CUX2P1-201ENST00000606426 MTX1Q13505 466 aa9.35□□□□□ -0.91
CUX2P1-201ENST00000606426 EPHA10Q5JZY3 1008 aa9.35□□□□□ -0.91
CUX2P1-201ENST00000606426 SUPT20HQ8NEM7 779 aa9.35□□□□□ -0.91
CUX2P1-201ENST00000606426 C7orf43Q8WVR3 580 aa9.35□□□□□ -0.91
CUX2P1-201ENST00000606426 CELF1Q92879 486 aaKnown RBP9.35□□□□□ -0.91
CUX2P1-201ENST00000606426 KAZALD1Q96I82 304 aa9.35□□□□□ -0.91
CUX2P1-201ENST00000606426 CCDC85AQ96PX6 553 aaPredicted RBP9.35□□□□□ -0.91
CUX2P1-201ENST00000606426 FBXO3Q9UK99 471 aa9.35□□□□□ -0.91
CUX2P1-201ENST00000606426 SUPT16HQ9Y5B9 1047 aaKnown RBP9.35□□□□□ -0.91
CUX2P1-201ENST00000606426 DLEC1Q9Y238 1755 aa9.35□□□□□ -0.91
CUX2P1-201ENST00000606426 DDX60Q8IY21 1712 aaKnown RBP9.34□□□□□ -0.91
CUX2P1-201ENST00000606426 KIAA1551Q9HCM1 1747 aa9.34□□□□□ -0.91
CUX2P1-201ENST00000606426 YBX3P16989 372 aaKnown RBP eCLIP9.34□□□□□ -0.91
CUX2P1-201ENST00000606426 ANKRD44Q8N8A2 993 aa9.34□□□□□ -0.91
CUX2P1-201ENST00000606426 PSMD1Q99460 953 aa9.34□□□□□ -0.91
CUX2P1-201ENST00000606426 ANKRD2Q9GZV1 360 aa9.34□□□□□ -0.91
CUX2P1-201ENST00000606426 VPS33BQ9H267 617 aa9.34□□□□□ -0.91
CUX2P1-201ENST00000606426 SEC31BQ9NQW1 1179 aa9.34□□□□□ -0.91
CUX2P1-201ENST00000606426 ZBTB40Q9NUA8 1239 aa9.34□□□□□ -0.91
CUX2P1-201ENST00000606426 LTBP3Q9NS15 1303 aa9.33□□□□□ -0.92
CUX2P1-201ENST00000606426 SRGAP3O43295 1099 aa9.33□□□□□ -0.92
CUX2P1-201ENST00000606426 HMMRO75330 724 aa9.33□□□□□ -0.92
CUX2P1-201ENST00000606426 FKBP4Q02790 459 aaKnown RBP eCLIP9.33□□□□□ -0.92
CUX2P1-201ENST00000606426 C20orf194Q5TEA3 1177 aa9.33□□□□□ -0.92
CUX2P1-201ENST00000606426 DPP8Q6V1X1 898 aaPredicted RBP9.33□□□□□ -0.92
CUX2P1-201ENST00000606426 LDHAL6AQ6ZMR3 332 aa9.33□□□□□ -0.92
CUX2P1-201ENST00000606426 ARHGAP27Q6ZUM4 889 aa9.33□□□□□ -0.92
CUX2P1-201ENST00000606426 RPAP2Q8IXW5 612 aaPredicted RBP9.33□□□□□ -0.92
CUX2P1-201ENST00000606426 MPNDQ8N594 471 aa9.33□□□□□ -0.92
CUX2P1-201ENST00000606426 TAOK3Q9H2K8 898 aa9.33□□□□□ -0.92
CUX2P1-201ENST00000606426 WWC3Q9ULE0 1092 aa9.33□□□□□ -0.92
CUX2P1-201ENST00000606426 COL11A2P13942 1736 aaPredicted RBP9.33□□□□□ -0.92
CUX2P1-201ENST00000606426 MROH5Q6ZUA9 1318 aa9.32□□□□□ -0.92
CUX2P1-201ENST00000606426 ATP2B4P23634 1241 aa9.32□□□□□ -0.92
CUX2P1-201ENST00000606426 ATP8B2P98198 1209 aa9.32□□□□□ -0.92
CUX2P1-201ENST00000606426 EYA3Q99504 573 aa9.32□□□□□ -0.92
CUX2P1-201ENST00000606426 RTFDC1Q9BY42 306 aaPredicted RBP9.32□□□□□ -0.92
CUX2P1-201ENST00000606426 CNNM1Q9NRU3 951 aa9.32□□□□□ -0.92
CUX2P1-201ENST00000606426 PODXL2Q9NZ53 605 aa9.32□□□□□ -0.92
CUX2P1-201ENST00000606426 ANKIB1Q9P2G1 1089 aa9.32□□□□□ -0.92
CUX2P1-201ENST00000606426 ZNF219Q9P2Y4 722 aaPredicted RBP9.32□□□□□ -0.92
CUX2P1-201ENST00000606426 BRCA1P38398 1863 aaKnown RBP9.32□□□□□ -0.92
CUX2P1-201ENST00000606426 XDHP47989 1333 aa9.31□□□□□ -0.92
CUX2P1-201ENST00000606426 CIAO1O76071 339 aa9.31□□□□□ -0.92
CUX2P1-201ENST00000606426 RFX5P48382 616 aaPredicted RBP9.31□□□□□ -0.92
CUX2P1-201ENST00000606426 CEP85Q6P2H3 762 aa9.31□□□□□ -0.92
CUX2P1-201ENST00000606426 COPRSQ9NQ92 184 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms