RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 TCERG1O14776 1098 aaKnown RBP30.29■■■□□ 2.44
SSX2IP-209ENST00000603677 LINS1Q8NG48 757 aa30.29■■■□□ 2.44
SSX2IP-209ENST00000603677 RTFDC1Q9BY42 306 aaPredicted RBP30.29■■■□□ 2.44
SSX2IP-209ENST00000603677 NMRK2Q9NPI5 230 aa30.29■■■□□ 2.44
SSX2IP-209ENST00000603677 NEURL1BA8MQ27 555 aa30.28■■■□□ 2.44
SSX2IP-209ENST00000603677 VEGFAP15692 232 aaPredicted RBP30.28■■■□□ 2.44
SSX2IP-209ENST00000603677 C16orf71Q8IYS4 520 aaPredicted RBP30.28■■■□□ 2.44
SSX2IP-209ENST00000603677 JDP2Q8WYK2 163 aa30.28■■■□□ 2.44
SSX2IP-209ENST00000603677 CT47B1P0C2W7 299 aaPredicted RBP30.27■■■□□ 2.44
SSX2IP-209ENST00000603677 CCDC152Q4G0S7 254 aa30.27■■■□□ 2.44
SSX2IP-209ENST00000603677 ZNF277Q9NRM2 450 aaPredicted RBP30.27■■■□□ 2.44
SSX2IP-209ENST00000603677 WDR90Q96KV7 1748 aa30.27■■■□□ 2.44
SSX2IP-209ENST00000603677 OLFM4Q6UX06 510 aa30.26■■■□□ 2.43
SSX2IP-209ENST00000603677 RBM46Q8TBY0 533 aaKnown RBP30.26■■■□□ 2.43
SSX2IP-209ENST00000603677 TRMT2AQ8IZ69 625 aaKnown RBP30.25■■■□□ 2.43
SSX2IP-209ENST00000603677 H7C1W4 665 aa30.24■■■□□ 2.43
SSX2IP-209ENST00000603677 FZD9O00144 591 aa30.24■■■□□ 2.43
SSX2IP-209ENST00000603677 MPNDQ8N594 471 aa30.24■■■□□ 2.43
SSX2IP-209ENST00000603677 RRAGCQ9HB90 399 aa30.24■■■□□ 2.43
SSX2IP-209ENST00000603677 GCKRQ14397 625 aa30.23■■■□□ 2.43
SSX2IP-209ENST00000603677 RTL5Q5HYW3 569 aaPredicted RBP30.23■■■□□ 2.43
SSX2IP-209ENST00000603677 LRRC37AA6NMS7 1700 aa30.22■■■□□ 2.43
SSX2IP-209ENST00000603677 RPS8P62241 208 aaKnown RBP30.22■■■□□ 2.43
SSX2IP-209ENST00000603677 DPP8Q6V1X1 898 aaPredicted RBP30.22■■■□□ 2.43
SSX2IP-209ENST00000603677 PLA2G12BQ9BX93 195 aa30.22■■■□□ 2.43
SSX2IP-209ENST00000603677 FSTL1Q12841 308 aa30.21■■■□□ 2.43
SSX2IP-209ENST00000603677 L3MBTL3Q96JM7 780 aaPredicted RBP30.21■■■□□ 2.43
SSX2IP-209ENST00000603677 RTL9Q8NET4 1388 aa30.2■■■□□ 2.43
SSX2IP-209ENST00000603677 IQCA1LA6NCM1 817 aa30.2■■■□□ 2.43
SSX2IP-209ENST00000603677 CWF19L2Q2TBE0 894 aaKnown RBP30.2■■■□□ 2.43
SSX2IP-209ENST00000603677 ALDH1L2Q3SY69 923 aa30.2■■■□□ 2.43
SSX2IP-209ENST00000603677 MYH3P11055 1940 aa30.2■■■□□ 2.42
SSX2IP-209ENST00000603677 LARGE2Q8N3Y3 721 aa30.19■■■□□ 2.42
SSX2IP-209ENST00000603677 PTPRCP08575 1304 aa30.19■■■□□ 2.42
SSX2IP-209ENST00000603677 CTSWP56202 376 aa30.18■■■□□ 2.42
SSX2IP-209ENST00000603677 MIER1Q8N108 512 aa30.18■■■□□ 2.42
SSX2IP-209ENST00000603677 CELF1Q92879 486 aaKnown RBP30.18■■■□□ 2.42
SSX2IP-209ENST00000603677 SCN4AP35499 1836 aa30.17■■■□□ 2.42
SSX2IP-209ENST00000603677 EIF6P56537 245 aaKnown RBP30.17■■■□□ 2.42
SSX2IP-209ENST00000603677 BEND3Q5T5X7 828 aa30.17■■■□□ 2.42
SSX2IP-209ENST00000603677 GPC2Q8N158 579 aa30.17■■■□□ 2.42
SSX2IP-209ENST00000603677 CDC5LQ99459 802 aaKnown RBP30.17■■■□□ 2.42
SSX2IP-209ENST00000603677 ALDH1L1O75891 902 aa30.16■■■□□ 2.42
SSX2IP-209ENST00000603677 KIAA2012Q0VF49 1180 aa30.16■■■□□ 2.42
SSX2IP-209ENST00000603677 TTLL11Q8NHH1 800 aa30.16■■■□□ 2.42
SSX2IP-209ENST00000603677 TAF1P21675 1872 aa30.16■■■□□ 2.42
SSX2IP-209ENST00000603677 PPIP5K2O43314 1243 aa30.15■■■□□ 2.42
SSX2IP-209ENST00000603677 DDNO94850 711 aaPredicted RBP30.15■■■□□ 2.42
SSX2IP-209ENST00000603677 UBE3BQ7Z3V4 1068 aa30.15■■■□□ 2.42
SSX2IP-209ENST00000603677 NIM1KQ8IY84 436 aa30.15■■■□□ 2.42
SSX2IP-209ENST00000603677 PODXL2Q9NZ53 605 aa30.15■■■□□ 2.42
SSX2IP-209ENST00000603677 POTECB2RU33 542 aa30.14■■■□□ 2.42
SSX2IP-209ENST00000603677 HSPA6P17066 643 aa30.14■■■□□ 2.42
SSX2IP-209ENST00000603677 ANKRD18AQ8IVF6 992 aa30.14■■■□□ 2.42
SSX2IP-209ENST00000603677 SMC1BQ8NDV3 1235 aa30.14■■■□□ 2.42
SSX2IP-209ENST00000603677 CASP7P55210 303 aa30.13■■■□□ 2.41
SSX2IP-209ENST00000603677 MRPL50Q8N5N7 158 aaKnown RBP30.13■■■□□ 2.41
SSX2IP-209ENST00000603677 CDCA7LQ96GN5 454 aa30.12■■■□□ 2.41
SSX2IP-209ENST00000603677 EYA3Q99504 573 aa30.12■■■□□ 2.41
SSX2IP-209ENST00000603677 NSFL1CQ9UNZ2 370 aaKnown RBP30.12■■■□□ 2.41
SSX2IP-209ENST00000603677 CSF1RP07333 972 aa30.11■■■□□ 2.41
SSX2IP-209ENST00000603677 BRPF1P55201 1214 aaPredicted RBP30.11■■■□□ 2.41
SSX2IP-209ENST00000603677 SEC31BQ9NQW1 1179 aa30.11■■■□□ 2.41
SSX2IP-209ENST00000603677 ZNRF3Q9ULT6 936 aa30.11■■■□□ 2.41
SSX2IP-209ENST00000603677 F6X3S4 739 aa30.1■■■□□ 2.41
SSX2IP-209ENST00000603677 AOC3Q16853 763 aa30.1■■■□□ 2.41
SSX2IP-209ENST00000603677 SRCIN1Q9C0H9 1055 aa30.1■■■□□ 2.41
SSX2IP-209ENST00000603677 BSDC1Q9NW68 430 aaPredicted RBP30.1■■■□□ 2.41
SSX2IP-209ENST00000603677 SSH1Q8WYL5 1049 aa30.09■■■□□ 2.41
SSX2IP-209ENST00000603677 JARID2Q92833 1246 aaPredicted RBP30.09■■■□□ 2.41
SSX2IP-209ENST00000603677 ZNF541Q9H0D2 1346 aa30.09■■■□□ 2.41
SSX2IP-209ENST00000603677 WASHC4Q2M389 1173 aa30.08■■■□□ 2.41
SSX2IP-209ENST00000603677 GRM8O00222 908 aa30.07■■■□□ 2.4
SSX2IP-209ENST00000603677 PNMA8AQ86V59 439 aaPredicted RBP30.07■■■□□ 2.4
SSX2IP-209ENST00000603677 HACL1Q9UJ83 578 aa30.07■■■□□ 2.4
SSX2IP-209ENST00000603677 DUOX1Q9NRD9 1551 aa30.07■■■□□ 2.4
SSX2IP-209ENST00000603677 LTBP1Q14766 1721 aa30.06■■■□□ 2.4
SSX2IP-209ENST00000603677 APLP1P51693 650 aa30.06■■■□□ 2.4
SSX2IP-209ENST00000603677 C9orf78Q9NZ63 289 aaPredicted RBP30.06■■■□□ 2.4
SSX2IP-209ENST00000603677 COL4A5P29400 1685 aa30.06■■■□□ 2.4
SSX2IP-209ENST00000603677 XDHP47989 1333 aa30.05■■■□□ 2.4
SSX2IP-209ENST00000603677 GPSM2P81274 684 aa30.05■■■□□ 2.4
SSX2IP-209ENST00000603677 TNIP1Q15025 636 aa30.05■■■□□ 2.4
SSX2IP-209ENST00000603677 GREM2Q9H772 168 aa30.05■■■□□ 2.4
SSX2IP-209ENST00000603677 C6orf229H3BNL8 230 aa30.04■■■□□ 2.4
SSX2IP-209ENST00000603677 IGHMBP2P38935 993 aaKnown RBP30.04■■■□□ 2.4
SSX2IP-209ENST00000603677 TBC1D16Q8TBP0 767 aa30.04■■■□□ 2.4
SSX2IP-209ENST00000603677 TAF1DQ9H5J8 278 aaPredicted RBP30.04■■■□□ 2.4
SSX2IP-209ENST00000603677 ANKIB1Q9P2G1 1089 aa30.04■■■□□ 2.4
SSX2IP-209ENST00000603677 SLC4A10Q6U841 1118 aa30.03■■■□□ 2.4
SSX2IP-209ENST00000603677 ZC3H12CQ9C0D7 883 aaKnown RBP30.03■■■□□ 2.4
SSX2IP-209ENST00000603677 POLLQ9UGP5 575 aa30.03■■■□□ 2.4
SSX2IP-209ENST00000603677 GGA1Q9UJY5 639 aa30.03■■■□□ 2.4
SSX2IP-209ENST00000603677 UTYO14607 1347 aa30.02■■■□□ 2.4
SSX2IP-209ENST00000603677 ATP2B4P23634 1241 aa30.02■■■□□ 2.4
SSX2IP-209ENST00000603677 LMOD1P29536 600 aaPredicted RBP30.02■■■□□ 2.4
SSX2IP-209ENST00000603677 SLC51AQ86UW1 340 aa30.02■■■□□ 2.4
SSX2IP-209ENST00000603677 SMC4Q9NTJ3 1288 aa30.02■■■□□ 2.4
SSX2IP-209ENST00000603677 ITGA6P23229 1130 aa30.01■■■□□ 2.39
SSX2IP-209ENST00000603677 LDHDQ86WU2 507 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms