RNA–Protein interactions for RNA: ENST00000602479.5

UBE2E3-206, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 3

Gene UBE2E3, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-206ENST00000602479 CREBZFQ9NS37 354 aa28.13■■■□□ 2.09
UBE2E3-206ENST00000602479 GJA3Q9Y6H8 435 aa28.13■■■□□ 2.09
UBE2E3-206ENST00000602479 TRIM28Q13263 835 aaKnown RBP28.12■■■□□ 2.09
UBE2E3-206ENST00000602479 PNMA8AQ86V59 439 aaPredicted RBP28.12■■■□□ 2.09
UBE2E3-206ENST00000602479 GOLGA2Q08379 1002 aa28.11■■■□□ 2.09
UBE2E3-206ENST00000602479 DPP8Q6V1X1 898 aaPredicted RBP28.11■■■□□ 2.09
UBE2E3-206ENST00000602479 SUPT20HQ8NEM7 779 aa28.11■■■□□ 2.09
UBE2E3-206ENST00000602479 ITGBL1O95965 494 aaPredicted RBP28.1■■■□□ 2.09
UBE2E3-206ENST00000602479 SCNN1DP51172 638 aa28.1■■■□□ 2.09
UBE2E3-206ENST00000602479 MPNDQ8N594 471 aa28.1■■■□□ 2.09
UBE2E3-206ENST00000602479 SF3B3Q15393 1217 aaKnown RBP28.09■■■□□ 2.09
UBE2E3-206ENST00000602479 TMC4Q7Z404 712 aa28.09■■■□□ 2.09
UBE2E3-206ENST00000602479 RIC3Q7Z5B4 369 aa28.09■■■□□ 2.09
UBE2E3-206ENST00000602479 CCDC27Q2M243 656 aa28.08■■■□□ 2.09
UBE2E3-206ENST00000602479 RTL5Q5HYW3 569 aaPredicted RBP28.08■■■□□ 2.09
UBE2E3-206ENST00000602479 CLEC11AQ9Y240 323 aa28.08■■■□□ 2.09
UBE2E3-206ENST00000602479 SPEF2Q9C093 1822 aa28.08■■■□□ 2.09
UBE2E3-206ENST00000602479 LMOD1P29536 600 aaPredicted RBP28.07■■■□□ 2.08
UBE2E3-206ENST00000602479 KIAA2012Q0VF49 1180 aa28.07■■■□□ 2.08
UBE2E3-206ENST00000602479 TSPYL6Q8N831 410 aa28.07■■■□□ 2.08
UBE2E3-206ENST00000602479 IRS4O14654 1257 aaPredicted RBP28.06■■■□□ 2.08
UBE2E3-206ENST00000602479 CELF1Q92879 486 aaKnown RBP28.06■■■□□ 2.08
UBE2E3-206ENST00000602479 TSR2Q969E8 191 aaKnown RBP28.06■■■□□ 2.08
UBE2E3-206ENST00000602479 ZNRF3Q9ULT6 936 aa28.06■■■□□ 2.08
UBE2E3-206ENST00000602479 EPS15P42566 896 aa28.05■■■□□ 2.08
UBE2E3-206ENST00000602479 CCDC30Q5VVM6 783 aa28.05■■■□□ 2.08
UBE2E3-206ENST00000602479 WWC1Q8IX03 1113 aa28.05■■■□□ 2.08
UBE2E3-206ENST00000602479 MAP1SQ66K74 1059 aaPredicted RBP28.04■■■□□ 2.08
UBE2E3-206ENST00000602479 ZBTB38Q8NAP3 1195 aaPredicted RBP28.04■■■□□ 2.08
UBE2E3-206ENST00000602479 MYD88Q99836 296 aa28.04■■■□□ 2.08
UBE2E3-206ENST00000602479 MKRN1Q9UHC7 482 aaKnown RBP28.04■■■□□ 2.08
UBE2E3-206ENST00000602479 CNTNAP1P78357 1384 aa28.03■■■□□ 2.08
UBE2E3-206ENST00000602479 CXCL9Q07325 125 aa28.03■■■□□ 2.08
UBE2E3-206ENST00000602479 CNTROBQ8N137 903 aa28.03■■■□□ 2.08
UBE2E3-206ENST00000602479 CHMP4AQ9BY43 222 aa28.03■■■□□ 2.08
UBE2E3-206ENST00000602479 PSME4Q14997 1843 aa28.02■■■□□ 2.08
UBE2E3-206ENST00000602479 CCDC191Q8NCU4 936 aa28.02■■■□□ 2.08
UBE2E3-206ENST00000602479 MRS2Q9HD23 443 aa28.02■■■□□ 2.08
UBE2E3-206ENST00000602479 SCN9AQ15858 1988 aa28.02■■■□□ 2.08
UBE2E3-206ENST00000602479 ZNF316A6NFI3 1004 aaPredicted RBP28.01■■■□□ 2.07
UBE2E3-206ENST00000602479 TMEM88BA6NKF7 163 aa28.01■■■□□ 2.07
UBE2E3-206ENST00000602479 GPRC5DQ9NZD1 345 aa28.01■■■□□ 2.07
UBE2E3-206ENST00000602479 DDX58O95786 925 aaKnown RBP28■■■□□ 2.07
UBE2E3-206ENST00000602479 METTL22Q9BUU2 404 aaPredicted RBP28■■■□□ 2.07
UBE2E3-206ENST00000602479 IL16Q14005 1332 aa27.99■■■□□ 2.07
UBE2E3-206ENST00000602479 PCCAP05165 728 aaPredicted RBP27.99■■■□□ 2.07
UBE2E3-206ENST00000602479 HSPA1AP0DMV8 641 aaKnown RBP27.99■■■□□ 2.07
UBE2E3-206ENST00000602479 HSPA1BP0DMV9 641 aaKnown RBP27.99■■■□□ 2.07
UBE2E3-206ENST00000602479 NCBP3Q53F19 620 aaKnown RBP27.99■■■□□ 2.07
UBE2E3-206ENST00000602479 USP50Q70EL3 339 aaPredicted RBP27.99■■■□□ 2.07
UBE2E3-206ENST00000602479 CWC25Q9NXE8 425 aaPredicted RBP27.99■■■□□ 2.07
UBE2E3-206ENST00000602479 CDHR2Q9BYE9 1310 aa27.98■■■□□ 2.07
UBE2E3-206ENST00000602479 CIAPIN1Q6FI81 312 aa27.98■■■□□ 2.07
UBE2E3-206ENST00000602479 YDJCA8MPS7 323 aa27.97■■■□□ 2.07
UBE2E3-206ENST00000602479 ANP32CO43423 234 aa27.97■■■□□ 2.07
UBE2E3-206ENST00000602479 HSP90B1P14625 803 aaKnown RBP27.97■■■□□ 2.07
UBE2E3-206ENST00000602479 GMPSP49915 693 aaPredicted RBP27.97■■■□□ 2.07
UBE2E3-206ENST00000602479 NSFL1CQ9UNZ2 370 aaKnown RBP27.97■■■□□ 2.07
UBE2E3-206ENST00000602479 MAP3K2Q9Y2U5 619 aa27.97■■■□□ 2.07
UBE2E3-206ENST00000602479 RAD17O75943 681 aa27.96■■■□□ 2.07
UBE2E3-206ENST00000602479 GPSM2P81274 684 aa27.96■■■□□ 2.07
UBE2E3-206ENST00000602479 TWISTNBQ3B726 338 aaPredicted RBP27.96■■■□□ 2.07
UBE2E3-206ENST00000602479 SEC31BQ9NQW1 1179 aa27.96■■■□□ 2.07
UBE2E3-206ENST00000602479 ADARB2Q9NS39 739 aaKnown RBP27.96■■■□□ 2.07
UBE2E3-206ENST00000602479 THSD7BQ9C0I4 1608 aa27.96■■■□□ 2.07
UBE2E3-206ENST00000602479 RPS8P62241 208 aaKnown RBP27.95■■■□□ 2.06
UBE2E3-206ENST00000602479 TNIP1Q15025 636 aa27.95■■■□□ 2.06
UBE2E3-206ENST00000602479 COL13A1Q5TAT6 717 aaPredicted RBP27.95■■■□□ 2.06
UBE2E3-206ENST00000602479 KSR2Q6VAB6 950 aa27.95■■■□□ 2.06
UBE2E3-206ENST00000602479 STK31Q9BXU1 1019 aa27.95■■■□□ 2.06
UBE2E3-206ENST00000602479 POLLQ9UGP5 575 aa27.95■■■□□ 2.06
UBE2E3-206ENST00000602479 POLR2AP24928 1970 aaKnown RBP27.95■■■□□ 2.06
UBE2E3-206ENST00000602479 PI4KAP2A4QPH2 592 aa27.94■■■□□ 2.06
UBE2E3-206ENST00000602479 PDE8AO60658 829 aa27.94■■■□□ 2.06
UBE2E3-206ENST00000602479 WASHC4Q2M389 1173 aa27.94■■■□□ 2.06
UBE2E3-206ENST00000602479 PI4KAP1Q8N8J0 262 aa27.94■■■□□ 2.06
UBE2E3-206ENST00000602479 JARID2Q92833 1246 aaPredicted RBP27.94■■■□□ 2.06
UBE2E3-206ENST00000602479 IGKV5-2P06315 115 aa27.93■■■□□ 2.06
UBE2E3-206ENST00000602479 FANCIQ9NVI1 1328 aa27.92■■■□□ 2.06
UBE2E3-206ENST00000602479 CCDC152Q4G0S7 254 aa27.92■■■□□ 2.06
UBE2E3-206ENST00000602479 ZNF646O15015 1829 aaPredicted RBP27.91■■■□□ 2.06
UBE2E3-206ENST00000602479 RASSF10A6NK89 507 aa27.91■■■□□ 2.06
UBE2E3-206ENST00000602479 C6orf229H3BNL8 230 aa27.91■■■□□ 2.06
UBE2E3-206ENST00000602479 VEGFBP49765 207 aa27.91■■■□□ 2.06
UBE2E3-206ENST00000602479 FMR1Q06787 632 aaKnown RBP eCLIP27.91■■■□□ 2.06
UBE2E3-206ENST00000602479 G2E3Q7L622 706 aa27.91■■■□□ 2.06
UBE2E3-206ENST00000602479 TBC1D16Q8TBP0 767 aa27.91■■■□□ 2.06
UBE2E3-206ENST00000602479 BCL2L13Q9BXK5 485 aa27.91■■■□□ 2.06
UBE2E3-206ENST00000602479 DBNDD1Q9H9R9 158 aa27.91■■■□□ 2.06
UBE2E3-206ENST00000602479 PODXL2Q9NZ53 605 aa27.9■■■□□ 2.06
UBE2E3-206ENST00000602479 RIMBP2O15034 1052 aa27.89■■■□□ 2.06
UBE2E3-206ENST00000602479 GPR101Q96P66 508 aaPredicted RBP27.89■■■□□ 2.06
UBE2E3-206ENST00000602479 EYA3Q99504 573 aa27.89■■■□□ 2.06
UBE2E3-206ENST00000602479 TRAF5O00463 557 aa27.88■■■□□ 2.05
UBE2E3-206ENST00000602479 SLC4A2P04920 1241 aa27.88■■■□□ 2.05
UBE2E3-206ENST00000602479 NEXNQ0ZGT2 675 aa27.88■■■□□ 2.05
UBE2E3-206ENST00000602479 CCDC85AQ96PX6 553 aaPredicted RBP27.88■■■□□ 2.05
UBE2E3-206ENST00000602479 RTL9Q8NET4 1388 aa27.87■■■□□ 2.05
UBE2E3-206ENST00000602479 A0A1B0GUL6 1792 aa27.87■■■□□ 2.05
UBE2E3-206ENST00000602479 SHTN1A0MZ66 631 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms