RNA–Protein interactions for RNA: ENST00000601592.5

USE1-209, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-209ENST00000601592 CDHR2Q9BYE9 1310 aa16.25■□□□□ 0.19
USE1-209ENST00000601592 GRAPQ13588 217 aa16.25■□□□□ 0.19
USE1-209ENST00000601592 SF3B3Q15393 1217 aaKnown RBP16.25■□□□□ 0.19
USE1-209ENST00000601592 SLC51AQ86UW1 340 aa16.25■□□□□ 0.19
USE1-209ENST00000601592 RTKN2Q8IZC4 609 aa16.25■□□□□ 0.19
USE1-209ENST00000601592 GRAPLQ8TC17 118 aaPredicted RBP16.25■□□□□ 0.19
USE1-209ENST00000601592 PRELPP51888 382 aa16.24■□□□□ 0.19
USE1-209ENST00000601592 FKBP4Q02790 459 aaKnown RBP eCLIP16.24■□□□□ 0.19
USE1-209ENST00000601592 CCDC152Q4G0S7 254 aa16.24■□□□□ 0.19
USE1-209ENST00000601592 BEND3Q5T5X7 828 aa16.24■□□□□ 0.19
USE1-209ENST00000601592 COL4A1P02462 1669 aa16.24■□□□□ 0.19
USE1-209ENST00000601592 LTBP3Q9NS15 1303 aa16.23■□□□□ 0.19
USE1-209ENST00000601592 LRRC37AA6NMS7 1700 aa16.23■□□□□ 0.19
USE1-209ENST00000601592 H7C1W4 665 aa16.23■□□□□ 0.19
USE1-209ENST00000601592 CTSWP56202 376 aa16.23■□□□□ 0.19
USE1-209ENST00000601592 CC2D2BQ6DHV5 1058 aa16.23■□□□□ 0.19
USE1-209ENST00000601592 SRCIN1Q9C0H9 1055 aa16.23■□□□□ 0.19
USE1-209ENST00000601592 ZNF277Q9NRM2 450 aaPredicted RBP16.23■□□□□ 0.19
USE1-209ENST00000601592 BBOX1O75936 387 aa16.22■□□□□ 0.19
USE1-209ENST00000601592 RARSP54136 660 aaKnown RBP16.22■□□□□ 0.19
USE1-209ENST00000601592 CELF1Q92879 486 aaKnown RBP16.22■□□□□ 0.19
USE1-209ENST00000601592 GPBP1L1Q9HC44 474 aaPredicted RBP16.22■□□□□ 0.19
USE1-209ENST00000601592 C9orf78Q9NZ63 289 aaPredicted RBP16.22■□□□□ 0.19
USE1-209ENST00000601592 ATP6V0A2Q9Y487 856 aa16.22■□□□□ 0.19
USE1-209ENST00000601592 ALDH1L1O75891 902 aa16.21■□□□□ 0.19
USE1-209ENST00000601592 SEC31BQ9NQW1 1179 aa16.21■□□□□ 0.19
USE1-209ENST00000601592 NOB1Q9ULX3 412 aaKnown RBP16.21■□□□□ 0.19
USE1-209ENST00000601592 GRM8O00222 908 aa16.2■□□□□ 0.18
USE1-209ENST00000601592 SP8Q8IXZ3 490 aa16.2■□□□□ 0.18
USE1-209ENST00000601592 CHMP3Q9Y3E7 222 aa16.2■□□□□ 0.18
USE1-209ENST00000601592 KIF16BQ96L93 1317 aa16.19■□□□□ 0.18
USE1-209ENST00000601592 SNED1Q8TER0 1413 aa16.19■□□□□ 0.18
USE1-209ENST00000601592 IARSP41252 1262 aaKnown RBP16.19■□□□□ 0.18
USE1-209ENST00000601592 CASP7P55210 303 aa16.19■□□□□ 0.18
USE1-209ENST00000601592 RPS8P62241 208 aaKnown RBP16.19■□□□□ 0.18
USE1-209ENST00000601592 GRIPAP1Q4V328 841 aa16.19■□□□□ 0.18
USE1-209ENST00000601592 DPP8Q6V1X1 898 aaPredicted RBP16.19■□□□□ 0.18
USE1-209ENST00000601592 TMC4Q7Z404 712 aa16.19■□□□□ 0.18
USE1-209ENST00000601592 TTLL11Q8NHH1 800 aa16.19■□□□□ 0.18
USE1-209ENST00000601592 GREM2Q9H772 168 aa16.19■□□□□ 0.18
USE1-209ENST00000601592 ZC3H4Q9UPT8 1303 aaKnown RBP16.19■□□□□ 0.18
USE1-209ENST00000601592 ANKRD18AQ8IVF6 992 aa16.18■□□□□ 0.18
USE1-209ENST00000601592 MPNDQ8N594 471 aa16.18■□□□□ 0.18
USE1-209ENST00000601592 FRAT1Q92837 279 aaPredicted RBP16.18■□□□□ 0.18
USE1-209ENST00000601592 CDC5LQ99459 802 aaKnown RBP16.18■□□□□ 0.18
USE1-209ENST00000601592 PSMD1Q99460 953 aa16.18■□□□□ 0.18
USE1-209ENST00000601592 API5Q9BZZ5 524 aaKnown RBP16.18■□□□□ 0.18
USE1-209ENST00000601592 BCAR3O75815 825 aa16.17■□□□□ 0.18
USE1-209ENST00000601592 FAM161AQ3B820 660 aa16.17■□□□□ 0.18
USE1-209ENST00000601592 PLA2G12BQ9BX93 195 aa16.17■□□□□ 0.18
USE1-209ENST00000601592 KDM2BQ8NHM5 1336 aa16.17■□□□□ 0.18
USE1-209ENST00000601592 PPIP5K2O43314 1243 aa16.16■□□□□ 0.18
USE1-209ENST00000601592 LARGE2Q8N3Y3 721 aa16.16■□□□□ 0.18
USE1-209ENST00000601592 SUPT20HQ8NEM7 779 aa16.16■□□□□ 0.18
USE1-209ENST00000601592 NSFL1CQ9UNZ2 370 aaKnown RBP16.16■□□□□ 0.18
USE1-209ENST00000601592 RTL9Q8NET4 1388 aa16.15■□□□□ 0.18
USE1-209ENST00000601592 ITGA6P23229 1130 aa16.15■□□□□ 0.18
USE1-209ENST00000601592 BRPF1P55201 1214 aaPredicted RBP16.15■□□□□ 0.18
USE1-209ENST00000601592 LTBP1Q14766 1721 aa16.15■□□□□ 0.18
USE1-209ENST00000601592 AOC3Q16853 763 aa16.15■□□□□ 0.18
USE1-209ENST00000601592 JDP2Q8WYK2 163 aa16.15■□□□□ 0.18
USE1-209ENST00000601592 DUOX1Q9NRD9 1551 aa16.15■□□□□ 0.18
USE1-209ENST00000601592 C6orf229H3BNL8 230 aa16.14■□□□□ 0.17
USE1-209ENST00000601592 IPO8O15397 1037 aaKnown RBP16.14■□□□□ 0.17
USE1-209ENST00000601592 NBPF7P0C2Y1 421 aaPredicted RBP16.14■□□□□ 0.17
USE1-209ENST00000601592 IGHMBP2P38935 993 aaKnown RBP16.14■□□□□ 0.17
USE1-209ENST00000601592 CCT4P50991 539 aaKnown RBP16.14■□□□□ 0.17
USE1-209ENST00000601592 GPSM2P81274 684 aa16.14■□□□□ 0.17
USE1-209ENST00000601592 FOXO4P98177 505 aa16.14■□□□□ 0.17
USE1-209ENST00000601592 DPY19L2Q6NUT2 758 aa16.14■□□□□ 0.17
USE1-209ENST00000601592 LMBR1LQ6UX01 489 aa16.14■□□□□ 0.17
USE1-209ENST00000601592 SUCLG2Q96I99 432 aa16.14■□□□□ 0.17
USE1-209ENST00000601592 NMRK2Q9NPI5 230 aa16.14■□□□□ 0.17
USE1-209ENST00000601592 ANKIB1Q9P2G1 1089 aa16.14■□□□□ 0.17
USE1-209ENST00000601592 COL4A5P29400 1685 aa16.14■□□□□ 0.17
USE1-209ENST00000601592 ANKRD18BA2A2Z9 1011 aa16.13■□□□□ 0.17
USE1-209ENST00000601592 GLTPD2A6NH11 291 aa16.13■□□□□ 0.17
USE1-209ENST00000601592 TAF7LQ5H9L4 462 aa16.13■□□□□ 0.17
USE1-209ENST00000601592 EPHA10Q5JZY3 1008 aa16.13■□□□□ 0.17
USE1-209ENST00000601592 NIM1KQ8IY84 436 aa16.13■□□□□ 0.17
USE1-209ENST00000601592 YTHDC1Q96MU7 727 aaKnown RBP16.13■□□□□ 0.17
USE1-209ENST00000601592 MPHOSPH8Q99549 860 aa16.13■□□□□ 0.17
USE1-209ENST00000601592 A0A1B0GUL6 1792 aa16.13■□□□□ 0.17
USE1-209ENST00000601592 UFL1O94874 794 aa16.12■□□□□ 0.17
USE1-209ENST00000601592 CSF1RP07333 972 aa16.12■□□□□ 0.17
USE1-209ENST00000601592 IFIT5Q13325 482 aaKnown RBP16.12■□□□□ 0.17
USE1-209ENST00000601592 RTFDC1Q9BY42 306 aaPredicted RBP16.12■□□□□ 0.17
USE1-209ENST00000601592 ZNF541Q9H0D2 1346 aa16.12■□□□□ 0.17
USE1-209ENST00000601592 WDR90Q96KV7 1748 aa16.11■□□□□ 0.17
USE1-209ENST00000601592 RIMBP2O15034 1052 aa16.11■□□□□ 0.17
USE1-209ENST00000601592 DDNO94850 711 aaPredicted RBP16.11■□□□□ 0.17
USE1-209ENST00000601592 EIF6P56537 245 aaKnown RBP16.11■□□□□ 0.17
USE1-209ENST00000601592 CCDC57Q2TAC2 916 aa16.11■□□□□ 0.17
USE1-209ENST00000601592 ATF7IPQ6VMQ6 1270 aa16.11■□□□□ 0.17
USE1-209ENST00000601592 C16orf71Q8IYS4 520 aaPredicted RBP16.11■□□□□ 0.17
USE1-209ENST00000601592 ARHGAP45Q92619 1136 aa16.11■□□□□ 0.17
USE1-209ENST00000601592 CLUAP1Q96AJ1 413 aa16.11■□□□□ 0.17
USE1-209ENST00000601592 GPR101Q96P66 508 aaPredicted RBP16.11■□□□□ 0.17
USE1-209ENST00000601592 BICC1Q9H694 974 aaKnown RBP16.11■□□□□ 0.17
USE1-209ENST00000601592 RRAGCQ9HB90 399 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms