RNA–Protein interactions for RNA: ENST00000601471.1

LINC00649-212, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-212ENST00000601471 RTKN2Q8IZC4 609 aa12.23□□□□□ -0.45
LINC00649-212ENST00000601471 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
LINC00649-212ENST00000601471 GRAPLQ8TC17 118 aaPredicted RBP12.23□□□□□ -0.45
LINC00649-212ENST00000601471 ATP6V0A2Q9Y487 856 aa12.23□□□□□ -0.45
LINC00649-212ENST00000601471 PTPRCP08575 1304 aa12.22□□□□□ -0.45
LINC00649-212ENST00000601471 H7C1W4 665 aa12.22□□□□□ -0.45
LINC00649-212ENST00000601471 BBOX1O75936 387 aa12.22□□□□□ -0.45
LINC00649-212ENST00000601471 GCKRQ14397 625 aa12.22□□□□□ -0.45
LINC00649-212ENST00000601471 BEND3Q5T5X7 828 aa12.22□□□□□ -0.45
LINC00649-212ENST00000601471 TMC4Q7Z404 712 aa12.22□□□□□ -0.45
LINC00649-212ENST00000601471 SSH1Q8WYL5 1049 aa12.22□□□□□ -0.45
LINC00649-212ENST00000601471 ZNF219Q9P2Y4 722 aaPredicted RBP12.22□□□□□ -0.45
LINC00649-212ENST00000601471 WDR90Q96KV7 1748 aa12.22□□□□□ -0.45
LINC00649-212ENST00000601471 PDE8AO60658 829 aa12.21□□□□□ -0.45
LINC00649-212ENST00000601471 BRPF1P55201 1214 aaPredicted RBP12.21□□□□□ -0.45
LINC00649-212ENST00000601471 DDX46Q7L014 1031 aaKnown RBP12.21□□□□□ -0.45
LINC00649-212ENST00000601471 PLA2G12BQ9BX93 195 aa12.21□□□□□ -0.45
LINC00649-212ENST00000601471 PCNTO95613 3336 aa12.2□□□□□ -0.46
LINC00649-212ENST00000601471 ZBED9Q6R2W3 1325 aa12.2□□□□□ -0.46
LINC00649-212ENST00000601471 F6X3S4 739 aa12.2□□□□□ -0.46
LINC00649-212ENST00000601471 RTL5Q5HYW3 569 aaPredicted RBP12.2□□□□□ -0.46
LINC00649-212ENST00000601471 SP8Q8IXZ3 490 aa12.2□□□□□ -0.46
LINC00649-212ENST00000601471 RTFDC1Q9BY42 306 aaPredicted RBP12.2□□□□□ -0.46
LINC00649-212ENST00000601471 GPBP1L1Q9HC44 474 aaPredicted RBP12.2□□□□□ -0.46
LINC00649-212ENST00000601471 CTSWP56202 376 aa12.19□□□□□ -0.46
LINC00649-212ENST00000601471 HNRNPUQ00839 825 aaKnown RBP eCLIP12.19□□□□□ -0.46
LINC00649-212ENST00000601471 CCDC152Q4G0S7 254 aa12.19□□□□□ -0.46
LINC00649-212ENST00000601471 CELF1Q92879 486 aaKnown RBP12.19□□□□□ -0.46
LINC00649-212ENST00000601471 UTYO14607 1347 aa12.18□□□□□ -0.46
LINC00649-212ENST00000601471 KDM2BQ8NHM5 1336 aa12.18□□□□□ -0.46
LINC00649-212ENST00000601471 GLTPD2A6NH11 291 aa12.18□□□□□ -0.46
LINC00649-212ENST00000601471 KIF3CO14782 793 aa12.18□□□□□ -0.46
LINC00649-212ENST00000601471 ALDH1L1O75891 902 aa12.18□□□□□ -0.46
LINC00649-212ENST00000601471 UBE3BQ7Z3V4 1068 aa12.18□□□□□ -0.46
LINC00649-212ENST00000601471 TTLL11Q8NHH1 800 aa12.18□□□□□ -0.46
LINC00649-212ENST00000601471 JARID2Q92833 1246 aaPredicted RBP12.18□□□□□ -0.46
LINC00649-212ENST00000601471 VPS33BQ9H267 617 aa12.18□□□□□ -0.46
LINC00649-212ENST00000601471 ZNF277Q9NRM2 450 aaPredicted RBP12.18□□□□□ -0.46
LINC00649-212ENST00000601471 SPEF2Q9C093 1822 aa12.18□□□□□ -0.46
LINC00649-212ENST00000601471 A0A1B0GUL6 1792 aa12.18□□□□□ -0.46
LINC00649-212ENST00000601471 FZD9O00144 591 aa12.17□□□□□ -0.46
LINC00649-212ENST00000601471 CSF1RP07333 972 aa12.17□□□□□ -0.46
LINC00649-212ENST00000601471 IARSP41252 1262 aaKnown RBP12.17□□□□□ -0.46
LINC00649-212ENST00000601471 SEC31BQ9NQW1 1179 aa12.17□□□□□ -0.46
LINC00649-212ENST00000601471 SCN4AP35499 1836 aa12.16□□□□□ -0.46
LINC00649-212ENST00000601471 GRM8O00222 908 aa12.16□□□□□ -0.46
LINC00649-212ENST00000601471 RARSP54136 660 aaKnown RBP12.16□□□□□ -0.46
LINC00649-212ENST00000601471 RPS8P62241 208 aaKnown RBP12.16□□□□□ -0.46
LINC00649-212ENST00000601471 ZNF526Q8TF50 670 aaPredicted RBP12.16□□□□□ -0.46
LINC00649-212ENST00000601471 BCL2L13Q9BXK5 485 aa12.16□□□□□ -0.46
LINC00649-212ENST00000601471 SRCIN1Q9C0H9 1055 aa12.16□□□□□ -0.46
LINC00649-212ENST00000601471 GREM2Q9H772 168 aa12.16□□□□□ -0.46
LINC00649-212ENST00000601471 NMRK2Q9NPI5 230 aa12.16□□□□□ -0.46
LINC00649-212ENST00000601471 SMC4Q9NTJ3 1288 aa12.16□□□□□ -0.46
LINC00649-212ENST00000601471 PODXL2Q9NZ53 605 aa12.16□□□□□ -0.46
LINC00649-212ENST00000601471 POTECB2RU33 542 aa12.15□□□□□ -0.46
LINC00649-212ENST00000601471 DPP8Q6V1X1 898 aaPredicted RBP12.15□□□□□ -0.46
LINC00649-212ENST00000601471 L3MBTL3Q96JM7 780 aaPredicted RBP12.15□□□□□ -0.46
LINC00649-212ENST00000601471 ADAMTSL1Q8N6G6 1762 aa12.15□□□□□ -0.46
LINC00649-212ENST00000601471 KIF16BQ96L93 1317 aa12.14□□□□□ -0.47
LINC00649-212ENST00000601471 ZNF541Q9H0D2 1346 aa12.14□□□□□ -0.47
LINC00649-212ENST00000601471 FOXO4P98177 505 aa12.14□□□□□ -0.47
LINC00649-212ENST00000601471 KIAA2012Q0VF49 1180 aa12.14□□□□□ -0.47
LINC00649-212ENST00000601471 MPNDQ8N594 471 aa12.14□□□□□ -0.47
LINC00649-212ENST00000601471 SUPT20HQ8NEM7 779 aa12.14□□□□□ -0.47
LINC00649-212ENST00000601471 ARHGAP45Q92619 1136 aa12.14□□□□□ -0.47
LINC00649-212ENST00000601471 CDC5LQ99459 802 aaKnown RBP12.14□□□□□ -0.47
LINC00649-212ENST00000601471 TMX4Q9H1E5 349 aaPredicted RBP12.14□□□□□ -0.47
LINC00649-212ENST00000601471 C1QTNF8P60827 252 aa12.13□□□□□ -0.47
LINC00649-212ENST00000601471 FAM161AQ3B820 660 aa12.13□□□□□ -0.47
LINC00649-212ENST00000601471 SLC4A10Q6U841 1118 aa12.13□□□□□ -0.47
LINC00649-212ENST00000601471 KAZALD1Q96I82 304 aa12.13□□□□□ -0.47
LINC00649-212ENST00000601471 BSDC1Q9NW68 430 aaPredicted RBP12.13□□□□□ -0.47
LINC00649-212ENST00000601471 ZNF646O15015 1829 aaPredicted RBP12.13□□□□□ -0.47
LINC00649-212ENST00000601471 PSME4Q14997 1843 aa12.13□□□□□ -0.47
LINC00649-212ENST00000601471 NBPF7P0C2Y1 421 aaPredicted RBP12.12□□□□□ -0.47
LINC00649-212ENST00000601471 GPSM2P81274 684 aa12.12□□□□□ -0.47
LINC00649-212ENST00000601471 AOC3Q16853 763 aa12.12□□□□□ -0.47
LINC00649-212ENST00000601471 EPHA10Q5JZY3 1008 aa12.12□□□□□ -0.47
LINC00649-212ENST00000601471 DPY19L2Q6NUT2 758 aa12.12□□□□□ -0.47
LINC00649-212ENST00000601471 ANKRD18AQ8IVF6 992 aa12.12□□□□□ -0.47
LINC00649-212ENST00000601471 GPC2Q8N158 579 aa12.12□□□□□ -0.47
LINC00649-212ENST00000601471 LARGE2Q8N3Y3 721 aa12.12□□□□□ -0.47
LINC00649-212ENST00000601471 TBC1D16Q8TBP0 767 aa12.12□□□□□ -0.47
LINC00649-212ENST00000601471 JDP2Q8WYK2 163 aa12.12□□□□□ -0.47
LINC00649-212ENST00000601471 CCDC85AQ96PX6 553 aaPredicted RBP12.12□□□□□ -0.47
LINC00649-212ENST00000601471 POLLQ9UGP5 575 aa12.12□□□□□ -0.47
LINC00649-212ENST00000601471 NOB1Q9ULX3 412 aaKnown RBP12.12□□□□□ -0.47
LINC00649-212ENST00000601471 XDHP47989 1333 aa12.11□□□□□ -0.47
LINC00649-212ENST00000601471 PPIP5K2O43314 1243 aa12.11□□□□□ -0.47
LINC00649-212ENST00000601471 TOMM70O94826 608 aa12.11□□□□□ -0.47
LINC00649-212ENST00000601471 DDNO94850 711 aaPredicted RBP12.11□□□□□ -0.47
LINC00649-212ENST00000601471 VEGFAP15692 232 aaPredicted RBP12.11□□□□□ -0.47
LINC00649-212ENST00000601471 ITGA6P23229 1130 aa12.11□□□□□ -0.47
LINC00649-212ENST00000601471 RABL6Q3YEC7 729 aaPredicted RBP12.11□□□□□ -0.47
LINC00649-212ENST00000601471 API5Q9BZZ5 524 aaKnown RBP12.11□□□□□ -0.47
LINC00649-212ENST00000601471 USP44Q9H0E7 712 aa12.11□□□□□ -0.47
LINC00649-212ENST00000601471 RRAGCQ9HB90 399 aa12.11□□□□□ -0.47
LINC00649-212ENST00000601471 C9orf78Q9NZ63 289 aaPredicted RBP12.11□□□□□ -0.47
LINC00649-212ENST00000601471 ZNF609O15014 1411 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms