RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 MAP1SQ66K74 1059 aaPredicted RBP22.04■■□□□ 1.12
SCAF1-204ENST00000601038 TMC4Q7Z404 712 aa22.04■■□□□ 1.12
SCAF1-204ENST00000601038 ZNRF3Q9ULT6 936 aa22.04■■□□□ 1.12
SCAF1-204ENST00000601038 EPS15P42566 896 aa22.03■■□□□ 1.12
SCAF1-204ENST00000601038 ZNF428Q96B54 188 aa22.03■■□□□ 1.12
SCAF1-204ENST00000601038 FAM89AQ96GI7 184 aa22.03■■□□□ 1.12
SCAF1-204ENST00000601038 CNTNAP1P78357 1384 aa22.02■■□□□ 1.12
SCAF1-204ENST00000601038 KIAA2012Q0VF49 1180 aa22.02■■□□□ 1.12
SCAF1-204ENST00000601038 SF3B3Q15393 1217 aaKnown RBP22.02■■□□□ 1.12
SCAF1-204ENST00000601038 CXCL9Q07325 125 aa22.01■■□□□ 1.11
SCAF1-204ENST00000601038 USP50Q70EL3 339 aaPredicted RBP22.01■■□□□ 1.11
SCAF1-204ENST00000601038 LTBP1Q14766 1721 aa22■■□□□ 1.11
SCAF1-204ENST00000601038 ELL2O00472 640 aaPredicted RBP22■■□□□ 1.11
SCAF1-204ENST00000601038 RIC3Q7Z5B4 369 aa22■■□□□ 1.11
SCAF1-204ENST00000601038 GOLGA2Q08379 1002 aa21.99■■□□□ 1.11
SCAF1-204ENST00000601038 CHMP4AQ9BY43 222 aa21.99■■□□□ 1.11
SCAF1-204ENST00000601038 PHAXQ9H814 394 aaKnown RBP21.99■■□□□ 1.11
SCAF1-204ENST00000601038 GPRC5DQ9NZD1 345 aa21.99■■□□□ 1.11
SCAF1-204ENST00000601038 TAF1P21675 1872 aa21.98■■□□□ 1.11
SCAF1-204ENST00000601038 DDX60Q8IY21 1712 aaKnown RBP21.98■■□□□ 1.11
SCAF1-204ENST00000601038 IRS4O14654 1257 aaPredicted RBP21.98■■□□□ 1.11
SCAF1-204ENST00000601038 C8orf58Q8NAV2 365 aa21.98■■□□□ 1.11
SCAF1-204ENST00000601038 RTL5Q5HYW3 569 aaPredicted RBP21.97■■□□□ 1.11
SCAF1-204ENST00000601038 CIAPIN1Q6FI81 312 aa21.97■■□□□ 1.11
SCAF1-204ENST00000601038 ZBTB38Q8NAP3 1195 aaPredicted RBP21.97■■□□□ 1.11
SCAF1-204ENST00000601038 CELF1Q92879 486 aaKnown RBP21.97■■□□□ 1.11
SCAF1-204ENST00000601038 ADARB2Q9NS39 739 aaKnown RBP21.97■■□□□ 1.11
SCAF1-204ENST00000601038 VEGFBP49765 207 aa21.96■■□□□ 1.11
SCAF1-204ENST00000601038 TNIP1Q15025 636 aa21.96■■□□□ 1.11
SCAF1-204ENST00000601038 PCNTO95613 3336 aa21.96■■□□□ 1.11
SCAF1-204ENST00000601038 RASSF10A6NK89 507 aa21.95■■□□□ 1.1
SCAF1-204ENST00000601038 HSP90B1P14625 803 aaKnown RBP21.95■■□□□ 1.1
SCAF1-204ENST00000601038 DEFB115Q30KQ5 88 aa21.95■■□□□ 1.1
SCAF1-204ENST00000601038 CCDC30Q5VVM6 783 aa21.95■■□□□ 1.1
SCAF1-204ENST00000601038 NSFL1CQ9UNZ2 370 aaKnown RBP21.95■■□□□ 1.1
SCAF1-204ENST00000601038 RAD17O75943 681 aa21.94■■□□□ 1.1
SCAF1-204ENST00000601038 GMPSP49915 693 aaPredicted RBP21.94■■□□□ 1.1
SCAF1-204ENST00000601038 CCDC184Q52MB2 194 aa21.94■■□□□ 1.1
SCAF1-204ENST00000601038 TNS4Q8IZW8 715 aa21.94■■□□□ 1.1
SCAF1-204ENST00000601038 CCDC191Q8NCU4 936 aa21.94■■□□□ 1.1
SCAF1-204ENST00000601038 CDHR2Q9BYE9 1310 aa21.94■■□□□ 1.1
SCAF1-204ENST00000601038 LRRC37AA6NMS7 1700 aa21.94■■□□□ 1.1
SCAF1-204ENST00000601038 YDJCA8MPS7 323 aa21.93■■□□□ 1.1
SCAF1-204ENST00000601038 RPS8P62241 208 aaKnown RBP21.93■■□□□ 1.1
SCAF1-204ENST00000601038 WASHC4Q2M389 1173 aa21.93■■□□□ 1.1
SCAF1-204ENST00000601038 MYD88Q99836 296 aa21.93■■□□□ 1.1
SCAF1-204ENST00000601038 BCL2L13Q9BXK5 485 aa21.93■■□□□ 1.1
SCAF1-204ENST00000601038 DUOX1Q9NRD9 1551 aa21.92■■□□□ 1.1
SCAF1-204ENST00000601038 DDX58O95786 925 aaKnown RBP21.92■■□□□ 1.1
SCAF1-204ENST00000601038 CCDC27Q2M243 656 aa21.92■■□□□ 1.1
SCAF1-204ENST00000601038 TSPYL6Q8N831 410 aa21.92■■□□□ 1.1
SCAF1-204ENST00000601038 METTL22Q9BUU2 404 aaPredicted RBP21.92■■□□□ 1.1
SCAF1-204ENST00000601038 ABT1Q9ULW3 272 aaKnown RBP21.92■■□□□ 1.1
SCAF1-204ENST00000601038 PCCAP05165 728 aaPredicted RBP21.91■■□□□ 1.1
SCAF1-204ENST00000601038 GPSM2P81274 684 aa21.91■■□□□ 1.1
SCAF1-204ENST00000601038 POLLQ9UGP5 575 aa21.91■■□□□ 1.1
SCAF1-204ENST00000601038 C6orf229H3BNL8 230 aa21.9■■□□□ 1.1
SCAF1-204ENST00000601038 FMR1Q06787 632 aaKnown RBP eCLIP21.9■■□□□ 1.1
SCAF1-204ENST00000601038 CWC25Q9NXE8 425 aaPredicted RBP21.9■■□□□ 1.1
SCAF1-204ENST00000601038 PGAP2Q9UHJ9 254 aa21.9■■□□□ 1.1
SCAF1-204ENST00000601038 TRAF5O00463 557 aa21.89■■□□□ 1.09
SCAF1-204ENST00000601038 FOXN1O15353 648 aa21.89■■□□□ 1.09
SCAF1-204ENST00000601038 PDE8AO60658 829 aa21.89■■□□□ 1.09
SCAF1-204ENST00000601038 CST9Q5W186 159 aa21.89■■□□□ 1.09
SCAF1-204ENST00000601038 WWC1Q8IX03 1113 aa21.89■■□□□ 1.09
SCAF1-204ENST00000601038 ZC3H15Q8WU90 426 aaKnown RBP21.89■■□□□ 1.09
SCAF1-204ENST00000601038 EYA3Q99504 573 aa21.89■■□□□ 1.09
SCAF1-204ENST00000601038 CNOT7Q9UIV1 285 aaKnown RBP21.89■■□□□ 1.09
SCAF1-204ENST00000601038 RIMBP2O15034 1052 aa21.88■■□□□ 1.09
SCAF1-204ENST00000601038 CCDC152Q4G0S7 254 aa21.88■■□□□ 1.09
SCAF1-204ENST00000601038 DPF2Q92785 391 aa21.88■■□□□ 1.09
SCAF1-204ENST00000601038 TSR2Q969E8 191 aaKnown RBP21.88■■□□□ 1.09
SCAF1-204ENST00000601038 DBNDD1Q9H9R9 158 aa21.88■■□□□ 1.09
SCAF1-204ENST00000601038 SEC31BQ9NQW1 1179 aa21.88■■□□□ 1.09
SCAF1-204ENST00000601038 WBP1LQ9NX94 342 aa21.88■■□□□ 1.09
SCAF1-204ENST00000601038 MAP3K2Q9Y2U5 619 aa21.88■■□□□ 1.09
SCAF1-204ENST00000601038 COL4A1P02462 1669 aa21.88■■□□□ 1.09
SCAF1-204ENST00000601038 WDR33Q9C0J8 1336 aaKnown RBP21.87■■□□□ 1.09
SCAF1-204ENST00000601038 H7C1D1 291 aa21.87■■□□□ 1.09
SCAF1-204ENST00000601038 HIRAP54198 1017 aaPredicted RBP21.87■■□□□ 1.09
SCAF1-204ENST00000601038 NCBP3Q53F19 620 aaKnown RBP21.87■■□□□ 1.09
SCAF1-204ENST00000601038 KSR2Q6VAB6 950 aa21.87■■□□□ 1.09
SCAF1-204ENST00000601038 TBC1D16Q8TBP0 767 aa21.87■■□□□ 1.09
SCAF1-204ENST00000601038 AIDAQ96BJ3 306 aa21.87■■□□□ 1.09
SCAF1-204ENST00000601038 PODXL2Q9NZ53 605 aa21.87■■□□□ 1.09
SCAF1-204ENST00000601038 PSMD14O00487 310 aa21.86■■□□□ 1.09
SCAF1-204ENST00000601038 JARID2Q92833 1246 aaPredicted RBP21.86■■□□□ 1.09
SCAF1-204ENST00000601038 STK31Q9BXU1 1019 aa21.86■■□□□ 1.09
SCAF1-204ENST00000601038 TRPM7Q96QT4 1865 aa21.86■■□□□ 1.09
SCAF1-204ENST00000601038 PI4KAP2A4QPH2 592 aa21.85■■□□□ 1.09
SCAF1-204ENST00000601038 ZEB1P37275 1124 aaPredicted RBP21.85■■□□□ 1.09
SCAF1-204ENST00000601038 CTCFP49711 727 aaPredicted RBP21.85■■□□□ 1.09
SCAF1-204ENST00000601038 MICALL2Q8IY33 904 aa21.85■■□□□ 1.09
SCAF1-204ENST00000601038 PI4KAP1Q8N8J0 262 aa21.85■■□□□ 1.09
SCAF1-204ENST00000601038 ZC3H12CQ9C0D7 883 aaKnown RBP21.85■■□□□ 1.09
SCAF1-204ENST00000601038 PRDM10Q9NQV6 1147 aa21.85■■□□□ 1.09
SCAF1-204ENST00000601038 ZBTB12Q9Y330 459 aaPredicted RBP21.85■■□□□ 1.09
SCAF1-204ENST00000601038 IL16Q14005 1332 aa21.84■■□□□ 1.09
SCAF1-204ENST00000601038 SHTN1A0MZ66 631 aa21.84■■□□□ 1.09
SCAF1-204ENST00000601038 ECE2O60344 883 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms