RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 RTL5Q5HYW3 569 aaPredicted RBP19.43■□□□□ 0.7
SHKBP1-226ENST00000600791 DPP8Q6V1X1 898 aaPredicted RBP19.43■□□□□ 0.7
SHKBP1-226ENST00000600791 TSPYL6Q8N831 410 aa19.43■□□□□ 0.7
SHKBP1-226ENST00000600791 SUPT20HQ8NEM7 779 aa19.43■□□□□ 0.7
SHKBP1-226ENST00000600791 TSR2Q969E8 191 aaKnown RBP19.43■□□□□ 0.7
SHKBP1-226ENST00000600791 VPS33BQ9H267 617 aa19.43■□□□□ 0.7
SHKBP1-226ENST00000600791 ZNF316A6NFI3 1004 aaPredicted RBP19.42■□□□□ 0.7
SHKBP1-226ENST00000600791 SCNN1DP51172 638 aa19.42■□□□□ 0.7
SHKBP1-226ENST00000600791 SF3B3Q15393 1217 aaKnown RBP19.42■□□□□ 0.7
SHKBP1-226ENST00000600791 PNMA8AQ86V59 439 aaPredicted RBP19.42■□□□□ 0.7
SHKBP1-226ENST00000600791 MPNDQ8N594 471 aa19.42■□□□□ 0.7
SHKBP1-226ENST00000600791 MRS2Q9HD23 443 aa19.42■□□□□ 0.7
SHKBP1-226ENST00000600791 CREBZFQ9NS37 354 aa19.42■□□□□ 0.7
SHKBP1-226ENST00000600791 IRS4O14654 1257 aaPredicted RBP19.41■□□□□ 0.7
SHKBP1-226ENST00000600791 CCDC30Q5VVM6 783 aa19.41■□□□□ 0.7
SHKBP1-226ENST00000600791 TMC4Q7Z404 712 aa19.41■□□□□ 0.7
SHKBP1-226ENST00000600791 WWC1Q8IX03 1113 aa19.41■□□□□ 0.7
SHKBP1-226ENST00000600791 MYD88Q99836 296 aa19.41■□□□□ 0.7
SHKBP1-226ENST00000600791 CLEC11AQ9Y240 323 aa19.41■□□□□ 0.7
SHKBP1-226ENST00000600791 ANP32CO43423 234 aa19.4■□□□□ 0.7
SHKBP1-226ENST00000600791 ITGBL1O95965 494 aaPredicted RBP19.4■□□□□ 0.7
SHKBP1-226ENST00000600791 LMOD1P29536 600 aaPredicted RBP19.4■□□□□ 0.7
SHKBP1-226ENST00000600791 KIAA2012Q0VF49 1180 aa19.4■□□□□ 0.7
SHKBP1-226ENST00000600791 CELF1Q92879 486 aaKnown RBP19.4■□□□□ 0.7
SHKBP1-226ENST00000600791 IFFO2Q5TF58 517 aa19.39■□□□□ 0.69
SHKBP1-226ENST00000600791 ZBTB38Q8NAP3 1195 aaPredicted RBP19.39■□□□□ 0.69
SHKBP1-226ENST00000600791 CHMP4AQ9BY43 222 aa19.39■□□□□ 0.69
SHKBP1-226ENST00000600791 ZNRF3Q9ULT6 936 aa19.39■□□□□ 0.69
SHKBP1-226ENST00000600791 EPS15P42566 896 aa19.38■□□□□ 0.69
SHKBP1-226ENST00000600791 MAP1SQ66K74 1059 aaPredicted RBP19.38■□□□□ 0.69
SHKBP1-226ENST00000600791 DDX58O95786 925 aaKnown RBP19.37■□□□□ 0.69
SHKBP1-226ENST00000600791 CXCL9Q07325 125 aa19.37■□□□□ 0.69
SHKBP1-226ENST00000600791 CCDC191Q8NCU4 936 aa19.37■□□□□ 0.69
SHKBP1-226ENST00000600791 METTL22Q9BUU2 404 aaPredicted RBP19.37■□□□□ 0.69
SHKBP1-226ENST00000600791 IL16Q14005 1332 aa19.36■□□□□ 0.69
SHKBP1-226ENST00000600791 PCCAP05165 728 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-226ENST00000600791 NCBP3Q53F19 620 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-226ENST00000600791 CNTROBQ8N137 903 aa19.36■□□□□ 0.69
SHKBP1-226ENST00000600791 CWC25Q9NXE8 425 aaPredicted RBP19.36■□□□□ 0.69
SHKBP1-226ENST00000600791 MKRN1Q9UHC7 482 aaKnown RBP19.36■□□□□ 0.69
SHKBP1-226ENST00000600791 MAP3K2Q9Y2U5 619 aa19.36■□□□□ 0.69
SHKBP1-226ENST00000600791 TWISTNBQ3B726 338 aaPredicted RBP19.35■□□□□ 0.69
SHKBP1-226ENST00000600791 STK31Q9BXU1 1019 aa19.35■□□□□ 0.69
SHKBP1-226ENST00000600791 GPRC5DQ9NZD1 345 aa19.35■□□□□ 0.69
SHKBP1-226ENST00000600791 NSFL1CQ9UNZ2 370 aaKnown RBP19.35■□□□□ 0.69
SHKBP1-226ENST00000600791 CNTNAP1P78357 1384 aa19.34■□□□□ 0.69
SHKBP1-226ENST00000600791 PI4KAP2A4QPH2 592 aa19.34■□□□□ 0.69
SHKBP1-226ENST00000600791 TMEM88BA6NKF7 163 aa19.34■□□□□ 0.69
SHKBP1-226ENST00000600791 HSP90B1P14625 803 aaKnown RBP19.34■□□□□ 0.69
SHKBP1-226ENST00000600791 GPSM2P81274 684 aa19.34■□□□□ 0.69
SHKBP1-226ENST00000600791 KSR2Q6VAB6 950 aa19.34■□□□□ 0.69
SHKBP1-226ENST00000600791 PI4KAP1Q8N8J0 262 aa19.34■□□□□ 0.69
SHKBP1-226ENST00000600791 FANCIQ9NVI1 1328 aa19.33■□□□□ 0.69
SHKBP1-226ENST00000600791 YDJCA8MPS7 323 aa19.33■□□□□ 0.68
SHKBP1-226ENST00000600791 RAD17O75943 681 aa19.33■□□□□ 0.68
SHKBP1-226ENST00000600791 GMPSP49915 693 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-226ENST00000600791 RPS8P62241 208 aaKnown RBP19.33■□□□□ 0.68
SHKBP1-226ENST00000600791 CIAPIN1Q6FI81 312 aa19.33■□□□□ 0.68
SHKBP1-226ENST00000600791 USP50Q70EL3 339 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-226ENST00000600791 JARID2Q92833 1246 aaPredicted RBP19.33■□□□□ 0.68
SHKBP1-226ENST00000600791 SEC31BQ9NQW1 1179 aa19.33■□□□□ 0.68
SHKBP1-226ENST00000600791 CDHR2Q9BYE9 1310 aa19.32■□□□□ 0.68
SHKBP1-226ENST00000600791 PDE8AO60658 829 aa19.32■□□□□ 0.68
SHKBP1-226ENST00000600791 IGKV5-2P06315 115 aa19.32■□□□□ 0.68
SHKBP1-226ENST00000600791 HSPA1AP0DMV8 641 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-226ENST00000600791 HSPA1BP0DMV9 641 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-226ENST00000600791 WASHC4Q2M389 1173 aa19.32■□□□□ 0.68
SHKBP1-226ENST00000600791 ADARB2Q9NS39 739 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-226ENST00000600791 POLLQ9UGP5 575 aa19.32■□□□□ 0.68
SHKBP1-226ENST00000600791 TNIP1Q15025 636 aa19.31■□□□□ 0.68
SHKBP1-226ENST00000600791 CCDC152Q4G0S7 254 aa19.31■□□□□ 0.68
SHKBP1-226ENST00000600791 G2E3Q7L622 706 aa19.31■□□□□ 0.68
SHKBP1-226ENST00000600791 SALL2Q9Y467 1007 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-226ENST00000600791 C6orf229H3BNL8 230 aa19.3■□□□□ 0.68
SHKBP1-226ENST00000600791 SLC4A2P04920 1241 aa19.3■□□□□ 0.68
SHKBP1-226ENST00000600791 CCDC85AQ96PX6 553 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-226ENST00000600791 DBNDD1Q9H9R9 158 aa19.3■□□□□ 0.68
SHKBP1-226ENST00000600791 MYH3P11055 1940 aa19.29■□□□□ 0.68
SHKBP1-226ENST00000600791 RIMBP2O15034 1052 aa19.29■□□□□ 0.68
SHKBP1-226ENST00000600791 NEXNQ0ZGT2 675 aa19.29■□□□□ 0.68
SHKBP1-226ENST00000600791 CWF19L2Q2TBE0 894 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-226ENST00000600791 WDR63Q8IWG1 891 aa19.29■□□□□ 0.68
SHKBP1-226ENST00000600791 TBC1D16Q8TBP0 767 aa19.29■□□□□ 0.68
SHKBP1-226ENST00000600791 GPR101Q96P66 508 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-226ENST00000600791 BCL2L13Q9BXK5 485 aa19.29■□□□□ 0.68
SHKBP1-226ENST00000600791 NEURL1BA8MQ27 555 aa19.28■□□□□ 0.68
SHKBP1-226ENST00000600791 FMR1Q06787 632 aaKnown RBP eCLIP19.28■□□□□ 0.68
SHKBP1-226ENST00000600791 COL13A1Q5TAT6 717 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-226ENST00000600791 EYA3Q99504 573 aa19.28■□□□□ 0.68
SHKBP1-226ENST00000600791 PODXL2Q9NZ53 605 aa19.28■□□□□ 0.68
SHKBP1-226ENST00000600791 TRPM7Q96QT4 1865 aa19.27■□□□□ 0.68
SHKBP1-226ENST00000600791 CACNA1FO60840 1977 aa19.27■□□□□ 0.68
SHKBP1-226ENST00000600791 VEGFBP49765 207 aa19.27■□□□□ 0.68
SHKBP1-226ENST00000600791 CTSWP56202 376 aa19.27■□□□□ 0.68
SHKBP1-226ENST00000600791 FLIIQ13045 1269 aa19.27■□□□□ 0.68
SHKBP1-226ENST00000600791 SHTN1A0MZ66 631 aa19.26■□□□□ 0.67
SHKBP1-226ENST00000600791 RASSF10A6NK89 507 aa19.26■□□□□ 0.67
SHKBP1-226ENST00000600791 TRAF5O00463 557 aa19.26■□□□□ 0.67
SHKBP1-226ENST00000600791 PSMD14O00487 310 aa19.26■□□□□ 0.67
SHKBP1-226ENST00000600791 ECE2O60344 883 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms