RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 UBE3BQ7Z3V4 1068 aa35.83■■■■□ 3.33
SSBP4-206ENST00000599699 ZC3H4Q9UPT8 1303 aaKnown RBP35.83■■■■□ 3.33
SSBP4-206ENST00000599699 CT47B1P0C2W7 299 aaPredicted RBP35.82■■■■□ 3.32
SSBP4-206ENST00000599699 SLC4A10Q6U841 1118 aa35.82■■■■□ 3.32
SSBP4-206ENST00000599699 SLC51AQ86UW1 340 aa35.82■■■■□ 3.32
SSBP4-206ENST00000599699 ALDH1L2Q3SY69 923 aa35.81■■■■□ 3.32
SSBP4-206ENST00000599699 CCDC152Q4G0S7 254 aa35.81■■■■□ 3.32
SSBP4-206ENST00000599699 CCDC85AQ96PX6 553 aaPredicted RBP35.81■■■■□ 3.32
SSBP4-206ENST00000599699 SMC4Q9NTJ3 1288 aa35.81■■■■□ 3.32
SSBP4-206ENST00000599699 H7C1W4 665 aa35.8■■■■□ 3.32
SSBP4-206ENST00000599699 BEND3Q5T5X7 828 aa35.8■■■■□ 3.32
SSBP4-206ENST00000599699 PSMD1Q99460 953 aa35.8■■■■□ 3.32
SSBP4-206ENST00000599699 SP8Q8IXZ3 490 aa35.79■■■■□ 3.32
SSBP4-206ENST00000599699 CELF1Q92879 486 aaKnown RBP35.79■■■■□ 3.32
SSBP4-206ENST00000599699 KDM2BQ8NHM5 1336 aa35.79■■■■□ 3.32
SSBP4-206ENST00000599699 CCDC88AQ3V6T2 1871 aa35.78■■■■□ 3.32
SSBP4-206ENST00000599699 TMC4Q7Z404 712 aa35.78■■■■□ 3.32
SSBP4-206ENST00000599699 CTSWP56202 376 aa35.77■■■■□ 3.32
SSBP4-206ENST00000599699 PTPRCP08575 1304 aa35.77■■■■□ 3.32
SSBP4-206ENST00000599699 IARSP41252 1262 aaKnown RBP35.76■■■■□ 3.32
SSBP4-206ENST00000599699 SEC31BQ9NQW1 1179 aa35.76■■■■□ 3.32
SSBP4-206ENST00000599699 SNED1Q8TER0 1413 aa35.75■■■■□ 3.31
SSBP4-206ENST00000599699 SRCIN1Q9C0H9 1055 aa35.75■■■■□ 3.31
SSBP4-206ENST00000599699 RPS8P62241 208 aaKnown RBP35.74■■■■□ 3.31
SSBP4-206ENST00000599699 DPP8Q6V1X1 898 aaPredicted RBP35.74■■■■□ 3.31
SSBP4-206ENST00000599699 TIAM2Q8IVF5 1701 aa35.74■■■■□ 3.31
SSBP4-206ENST00000599699 DPY19L2Q6NUT2 758 aa35.73■■■■□ 3.31
SSBP4-206ENST00000599699 MPNDQ8N594 471 aa35.73■■■■□ 3.31
SSBP4-206ENST00000599699 NMRK2Q9NPI5 230 aa35.73■■■■□ 3.31
SSBP4-206ENST00000599699 TAF1P21675 1872 aa35.73■■■■□ 3.31
SSBP4-206ENST00000599699 GLTPD2A6NH11 291 aa35.71■■■■□ 3.31
SSBP4-206ENST00000599699 ALDH1L1O75891 902 aa35.71■■■■□ 3.31
SSBP4-206ENST00000599699 TTLL11Q8NHH1 800 aa35.71■■■■□ 3.31
SSBP4-206ENST00000599699 C9orf78Q9NZ63 289 aaPredicted RBP35.71■■■■□ 3.31
SSBP4-206ENST00000599699 CASP7P55210 303 aa35.7■■■■□ 3.31
SSBP4-206ENST00000599699 SUPT20HQ8NEM7 779 aa35.7■■■■□ 3.31
SSBP4-206ENST00000599699 JDP2Q8WYK2 163 aa35.7■■■■□ 3.31
SSBP4-206ENST00000599699 LARGE2Q8N3Y3 721 aa35.69■■■■□ 3.3
SSBP4-206ENST00000599699 ZBED9Q6R2W3 1325 aa35.68■■■■□ 3.3
SSBP4-206ENST00000599699 DICER1Q9UPY3 1922 aaKnown RBP35.68■■■■□ 3.3
SSBP4-206ENST00000599699 GRM8O00222 908 aa35.68■■■■□ 3.3
SSBP4-206ENST00000599699 ANKRD18AQ8IVF6 992 aa35.68■■■■□ 3.3
SSBP4-206ENST00000599699 PLA2G12BQ9BX93 195 aa35.68■■■■□ 3.3
SSBP4-206ENST00000599699 GREM2Q9H772 168 aa35.68■■■■□ 3.3
SSBP4-206ENST00000599699 RARSP54136 660 aaKnown RBP35.67■■■■□ 3.3
SSBP4-206ENST00000599699 CDC5LQ99459 802 aaKnown RBP35.67■■■■□ 3.3
SSBP4-206ENST00000599699 RRAGCQ9HB90 399 aa35.67■■■■□ 3.3
SSBP4-206ENST00000599699 PPIP5K2O43314 1243 aa35.66■■■■□ 3.3
SSBP4-206ENST00000599699 NSFL1CQ9UNZ2 370 aaKnown RBP35.66■■■■□ 3.3
SSBP4-206ENST00000599699 KIF3CO14782 793 aa35.65■■■■□ 3.3
SSBP4-206ENST00000599699 RTFDC1Q9BY42 306 aaPredicted RBP35.65■■■■□ 3.3
SSBP4-206ENST00000599699 NOB1Q9ULX3 412 aaKnown RBP35.65■■■■□ 3.3
SSBP4-206ENST00000599699 COL4A1P02462 1669 aa35.65■■■■□ 3.3
SSBP4-206ENST00000599699 AOC3Q16853 763 aa35.64■■■■□ 3.3
SSBP4-206ENST00000599699 C1QTNF8P60827 252 aa35.62■■■■□ 3.29
SSBP4-206ENST00000599699 GPSM2P81274 684 aa35.62■■■■□ 3.29
SSBP4-206ENST00000599699 NIM1KQ8IY84 436 aa35.62■■■■□ 3.29
SSBP4-206ENST00000599699 C16orf71Q8IYS4 520 aaPredicted RBP35.62■■■■□ 3.29
SSBP4-206ENST00000599699 VPS33BQ9H267 617 aa35.62■■■■□ 3.29
SSBP4-206ENST00000599699 RTL9Q8NET4 1388 aa35.62■■■■□ 3.29
SSBP4-206ENST00000599699 DDNO94850 711 aaPredicted RBP35.61■■■■□ 3.29
SSBP4-206ENST00000599699 FAM161AQ3B820 660 aa35.61■■■■□ 3.29
SSBP4-206ENST00000599699 CHMP3Q9Y3E7 222 aa35.61■■■■□ 3.29
SSBP4-206ENST00000599699 MYH3P11055 1940 aa35.6■■■■□ 3.29
SSBP4-206ENST00000599699 C6orf229H3BNL8 230 aa35.6■■■■□ 3.29
SSBP4-206ENST00000599699 CSF1RP07333 972 aa35.6■■■■□ 3.29
SSBP4-206ENST00000599699 BRPF1P55201 1214 aaPredicted RBP35.6■■■■□ 3.29
SSBP4-206ENST00000599699 ANKIB1Q9P2G1 1089 aa35.6■■■■□ 3.29
SSBP4-206ENST00000599699 ZNF541Q9H0D2 1346 aa35.59■■■■□ 3.29
SSBP4-206ENST00000599699 FZD9O00144 591 aa35.59■■■■□ 3.29
SSBP4-206ENST00000599699 ITGA6P23229 1130 aa35.59■■■■□ 3.29
SSBP4-206ENST00000599699 API5Q9BZZ5 524 aaKnown RBP35.59■■■■□ 3.29
SSBP4-206ENST00000599699 LRRC37AA6NMS7 1700 aa35.58■■■■□ 3.29
SSBP4-206ENST00000599699 IGHMBP2P38935 993 aaKnown RBP35.58■■■■□ 3.29
SSBP4-206ENST00000599699 EIF6P56537 245 aaKnown RBP35.58■■■■□ 3.29
SSBP4-206ENST00000599699 FOXO4P98177 505 aa35.58■■■■□ 3.29
SSBP4-206ENST00000599699 KIF16BQ96L93 1317 aa35.57■■■■□ 3.29
SSBP4-206ENST00000599699 VEGFAP15692 232 aaPredicted RBP35.57■■■■□ 3.28
SSBP4-206ENST00000599699 KIAA2012Q0VF49 1180 aa35.56■■■■□ 3.28
SSBP4-206ENST00000599699 LMBR1LQ6UX01 489 aa35.56■■■■□ 3.28
SSBP4-206ENST00000599699 ANKRD18BA2A2Z9 1011 aa35.55■■■■□ 3.28
SSBP4-206ENST00000599699 NBPF7P0C2Y1 421 aaPredicted RBP35.55■■■■□ 3.28
SSBP4-206ENST00000599699 WASHC4Q2M389 1173 aa35.55■■■■□ 3.28
SSBP4-206ENST00000599699 BSDC1Q9NW68 430 aaPredicted RBP35.55■■■■□ 3.28
SSBP4-206ENST00000599699 POLLQ9UGP5 575 aa35.55■■■■□ 3.28
SSBP4-206ENST00000599699 COL4A5P29400 1685 aa35.55■■■■□ 3.28
SSBP4-206ENST00000599699 IFIT5Q13325 482 aaKnown RBP35.54■■■■□ 3.28
SSBP4-206ENST00000599699 EPHA10Q5JZY3 1008 aa35.54■■■■□ 3.28
SSBP4-206ENST00000599699 TBC1D16Q8TBP0 767 aa35.54■■■■□ 3.28
SSBP4-206ENST00000599699 EYA3Q99504 573 aa35.54■■■■□ 3.28
SSBP4-206ENST00000599699 MPHOSPH8Q99549 860 aa35.54■■■■□ 3.28
SSBP4-206ENST00000599699 TOMM70O94826 608 aa35.53■■■■□ 3.28
SSBP4-206ENST00000599699 UFL1O94874 794 aa35.53■■■■□ 3.28
SSBP4-206ENST00000599699 CCT4P50991 539 aaKnown RBP35.53■■■■□ 3.28
SSBP4-206ENST00000599699 SUCLG2Q96I99 432 aa35.53■■■■□ 3.28
SSBP4-206ENST00000599699 PODXL2Q9NZ53 605 aa35.53■■■■□ 3.28
SSBP4-206ENST00000599699 GGA1Q9UJY5 639 aa35.53■■■■□ 3.28
SSBP4-206ENST00000599699 GJA3Q9Y6H8 435 aa35.53■■■■□ 3.28
SSBP4-206ENST00000599699 RIMBP2O15034 1052 aa35.52■■■■□ 3.28
SSBP4-206ENST00000599699 BCAR3O75815 825 aa35.52■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms