RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 SF3B3Q15393 1217 aaKnown RBP29.6■■■□□ 2.33
CCDC61-207ENST00000599044 DPP8Q6V1X1 898 aaPredicted RBP29.6■■■□□ 2.33
CCDC61-207ENST00000599044 NIM1KQ8IY84 436 aa29.6■■■□□ 2.33
CCDC61-207ENST00000599044 MPNDQ8N594 471 aa29.6■■■□□ 2.33
CCDC61-207ENST00000599044 CELF1Q92879 486 aaKnown RBP29.6■■■□□ 2.33
CCDC61-207ENST00000599044 MRS2Q9HD23 443 aa29.6■■■□□ 2.33
CCDC61-207ENST00000599044 PASKQ96RG2 1323 aa29.6■■■□□ 2.33
CCDC61-207ENST00000599044 LTBP1Q14766 1721 aa29.59■■■□□ 2.33
CCDC61-207ENST00000599044 ITGBL1O95965 494 aaPredicted RBP29.59■■■□□ 2.33
CCDC61-207ENST00000599044 SCNN1DP51172 638 aa29.59■■■□□ 2.33
CCDC61-207ENST00000599044 CCDC27Q2M243 656 aa29.59■■■□□ 2.33
CCDC61-207ENST00000599044 MYD88Q99836 296 aa29.59■■■□□ 2.33
CCDC61-207ENST00000599044 CLEC11AQ9Y240 323 aa29.59■■■□□ 2.33
CCDC61-207ENST00000599044 IRS4O14654 1257 aaPredicted RBP29.58■■■□□ 2.33
CCDC61-207ENST00000599044 EPS15P42566 896 aa29.58■■■□□ 2.33
CCDC61-207ENST00000599044 CCDC30Q5VVM6 783 aa29.57■■■□□ 2.32
CCDC61-207ENST00000599044 JARID2Q92833 1246 aaPredicted RBP29.57■■■□□ 2.32
CCDC61-207ENST00000599044 VPS33BQ9H267 617 aa29.57■■■□□ 2.32
CCDC61-207ENST00000599044 MAP1SQ66K74 1059 aaPredicted RBP29.56■■■□□ 2.32
CCDC61-207ENST00000599044 PNMA8AQ86V59 439 aaPredicted RBP29.56■■■□□ 2.32
CCDC61-207ENST00000599044 SUPT20HQ8NEM7 779 aa29.56■■■□□ 2.32
CCDC61-207ENST00000599044 CREBZFQ9NS37 354 aa29.56■■■□□ 2.32
CCDC61-207ENST00000599044 ANP32CO43423 234 aa29.55■■■□□ 2.32
CCDC61-207ENST00000599044 CXCL9Q07325 125 aa29.55■■■□□ 2.32
CCDC61-207ENST00000599044 ZBTB38Q8NAP3 1195 aaPredicted RBP29.55■■■□□ 2.32
CCDC61-207ENST00000599044 KIAA2012Q0VF49 1180 aa29.54■■■□□ 2.32
CCDC61-207ENST00000599044 ZNRF3Q9ULT6 936 aa29.54■■■□□ 2.32
CCDC61-207ENST00000599044 DUOX1Q9NRD9 1551 aa29.54■■■□□ 2.32
CCDC61-207ENST00000599044 COL13A1Q5TAT6 717 aaPredicted RBP29.53■■■□□ 2.32
CCDC61-207ENST00000599044 METTL22Q9BUU2 404 aaPredicted RBP29.53■■■□□ 2.32
CCDC61-207ENST00000599044 MKRN1Q9UHC7 482 aaKnown RBP29.53■■■□□ 2.32
CCDC61-207ENST00000599044 CNTROBQ8N137 903 aa29.52■■■□□ 2.32
CCDC61-207ENST00000599044 MAP3K2Q9Y2U5 619 aa29.52■■■□□ 2.32
CCDC61-207ENST00000599044 SALL2Q9Y467 1007 aaPredicted RBP29.52■■■□□ 2.32
CCDC61-207ENST00000599044 LMOD1P29536 600 aaPredicted RBP29.51■■■□□ 2.31
CCDC61-207ENST00000599044 TMC4Q7Z404 712 aa29.51■■■□□ 2.31
CCDC61-207ENST00000599044 CCDC191Q8NCU4 936 aa29.51■■■□□ 2.31
CCDC61-207ENST00000599044 SEC31BQ9NQW1 1179 aa29.51■■■□□ 2.31
CCDC61-207ENST00000599044 LRRC37AA6NMS7 1700 aa29.51■■■□□ 2.31
CCDC61-207ENST00000599044 GPSM2P81274 684 aa29.5■■■□□ 2.31
CCDC61-207ENST00000599044 TWISTNBQ3B726 338 aaPredicted RBP29.5■■■□□ 2.31
CCDC61-207ENST00000599044 G2E3Q7L622 706 aa29.5■■■□□ 2.31
CCDC61-207ENST00000599044 NSFL1CQ9UNZ2 370 aaKnown RBP29.5■■■□□ 2.31
CCDC61-207ENST00000599044 YDJCA8MPS7 323 aa29.49■■■□□ 2.31
CCDC61-207ENST00000599044 RAD17O75943 681 aa29.49■■■□□ 2.31
CCDC61-207ENST00000599044 DDX58O95786 925 aaKnown RBP29.49■■■□□ 2.31
CCDC61-207ENST00000599044 PCCAP05165 728 aaPredicted RBP29.49■■■□□ 2.31
CCDC61-207ENST00000599044 CWC25Q9NXE8 425 aaPredicted RBP29.49■■■□□ 2.31
CCDC61-207ENST00000599044 IL16Q14005 1332 aa29.48■■■□□ 2.31
CCDC61-207ENST00000599044 PI4KAP2A4QPH2 592 aa29.48■■■□□ 2.31
CCDC61-207ENST00000599044 IGKV5-2P06315 115 aa29.48■■■□□ 2.31
CCDC61-207ENST00000599044 HSPA1AP0DMV8 641 aaKnown RBP29.48■■■□□ 2.31
CCDC61-207ENST00000599044 HSPA1BP0DMV9 641 aaKnown RBP29.48■■■□□ 2.31
CCDC61-207ENST00000599044 FMR1Q06787 632 aaKnown RBP eCLIP29.48■■■□□ 2.31
CCDC61-207ENST00000599044 PI4KAP1Q8N8J0 262 aa29.48■■■□□ 2.31
CCDC61-207ENST00000599044 GPRC5DQ9NZD1 345 aa29.48■■■□□ 2.31
CCDC61-207ENST00000599044 POLLQ9UGP5 575 aa29.48■■■□□ 2.31
CCDC61-207ENST00000599044 GMPSP49915 693 aaPredicted RBP29.47■■■□□ 2.31
CCDC61-207ENST00000599044 RPS8P62241 208 aaKnown RBP29.47■■■□□ 2.31
CCDC61-207ENST00000599044 KSR2Q6VAB6 950 aa29.47■■■□□ 2.31
CCDC61-207ENST00000599044 CCDC85AQ96PX6 553 aaPredicted RBP29.47■■■□□ 2.31
CCDC61-207ENST00000599044 TMEM88BA6NKF7 163 aa29.46■■■□□ 2.31
CCDC61-207ENST00000599044 NCBP3Q53F19 620 aaKnown RBP29.46■■■□□ 2.31
CCDC61-207ENST00000599044 GPR101Q96P66 508 aaPredicted RBP29.46■■■□□ 2.31
CCDC61-207ENST00000599044 CHMP4AQ9BY43 222 aa29.46■■■□□ 2.31
CCDC61-207ENST00000599044 RIMBP2O15034 1052 aa29.45■■■□□ 2.31
CCDC61-207ENST00000599044 CIAPIN1Q6FI81 312 aa29.45■■■□□ 2.31
CCDC61-207ENST00000599044 STK31Q9BXU1 1019 aa29.45■■■□□ 2.31
CCDC61-207ENST00000599044 FANCIQ9NVI1 1328 aa29.45■■■□□ 2.3
CCDC61-207ENST00000599044 PDE8AO60658 829 aa29.44■■■□□ 2.3
CCDC61-207ENST00000599044 SLC4A2P04920 1241 aa29.44■■■□□ 2.3
CCDC61-207ENST00000599044 WASHC4Q2M389 1173 aa29.44■■■□□ 2.3
CCDC61-207ENST00000599044 USP50Q70EL3 339 aaPredicted RBP29.44■■■□□ 2.3
CCDC61-207ENST00000599044 CNTNAP1P78357 1384 aa29.43■■■□□ 2.3
CCDC61-207ENST00000599044 C6orf229H3BNL8 230 aa29.43■■■□□ 2.3
CCDC61-207ENST00000599044 TRPM7Q96QT4 1865 aa29.42■■■□□ 2.3
CCDC61-207ENST00000599044 SHTN1A0MZ66 631 aa29.42■■■□□ 2.3
CCDC61-207ENST00000599044 CWF19L2Q2TBE0 894 aaKnown RBP29.42■■■□□ 2.3
CCDC61-207ENST00000599044 TBC1D16Q8TBP0 767 aa29.42■■■□□ 2.3
CCDC61-207ENST00000599044 DBNDD1Q9H9R9 158 aa29.42■■■□□ 2.3
CCDC61-207ENST00000599044 SPINK5Q9NQ38 1064 aaPredicted RBP29.42■■■□□ 2.3
CCDC61-207ENST00000599044 ADARB2Q9NS39 739 aaKnown RBP29.42■■■□□ 2.3
CCDC61-207ENST00000599044 KCNQ5Q9NR82 932 aa29.41■■■□□ 2.3
CCDC61-207ENST00000599044 TNIP1Q15025 636 aa29.4■■■□□ 2.3
CCDC61-207ENST00000599044 DOK7Q18PE1 504 aa29.4■■■□□ 2.3
CCDC61-207ENST00000599044 CCDC152Q4G0S7 254 aa29.4■■■□□ 2.3
CCDC61-207ENST00000599044 WDR63Q8IWG1 891 aa29.4■■■□□ 2.3
CCDC61-207ENST00000599044 ZBTB12Q9Y330 459 aaPredicted RBP29.4■■■□□ 2.3
CCDC61-207ENST00000599044 TRAF5O00463 557 aa29.39■■■□□ 2.3
CCDC61-207ENST00000599044 VAMP4O75379 141 aa29.39■■■□□ 2.3
CCDC61-207ENST00000599044 HSP90B1P14625 803 aaKnown RBP29.39■■■□□ 2.3
CCDC61-207ENST00000599044 VEGFBP49765 207 aa29.39■■■□□ 2.3
CCDC61-207ENST00000599044 BCL2L13Q9BXK5 485 aa29.39■■■□□ 2.3
CCDC61-207ENST00000599044 CDHR2Q9BYE9 1310 aa29.39■■■□□ 2.3
CCDC61-207ENST00000599044 NEURL1BA8MQ27 555 aa29.38■■■□□ 2.29
CCDC61-207ENST00000599044 HIRAP54198 1017 aaPredicted RBP29.38■■■□□ 2.29
CCDC61-207ENST00000599044 EXOSC9Q06265 439 aaKnown RBP29.38■■■□□ 2.29
CCDC61-207ENST00000599044 FAM9BQ8IZU0 186 aa29.38■■■□□ 2.29
CCDC61-207ENST00000599044 TNS4Q8IZW8 715 aa29.37■■■□□ 2.29
CCDC61-207ENST00000599044 PODXL2Q9NZ53 605 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms