RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 BBOX1O75936 387 aa17.71■□□□□ 0.43
SCAF1-203ENST00000598359 AOC3Q16853 763 aa17.71■□□□□ 0.43
SCAF1-203ENST00000598359 L3MBTL3Q96JM7 780 aaPredicted RBP17.71■□□□□ 0.43
SCAF1-203ENST00000598359 SPINK5Q9NQ38 1064 aaPredicted RBP17.71■□□□□ 0.43
SCAF1-203ENST00000598359 MAP3K2Q9Y2U5 619 aa17.71■□□□□ 0.43
SCAF1-203ENST00000598359 PPIP5K2O43314 1243 aa17.7■□□□□ 0.42
SCAF1-203ENST00000598359 SP8Q8IXZ3 490 aa17.7■□□□□ 0.42
SCAF1-203ENST00000598359 CELF1Q92879 486 aaKnown RBP17.7■□□□□ 0.42
SCAF1-203ENST00000598359 METTL22Q9BUU2 404 aaPredicted RBP17.7■□□□□ 0.42
SCAF1-203ENST00000598359 STK31Q9BXU1 1019 aa17.7■□□□□ 0.42
SCAF1-203ENST00000598359 TMX4Q9H1E5 349 aaPredicted RBP17.7■□□□□ 0.42
SCAF1-203ENST00000598359 TAF1DQ9H5J8 278 aaPredicted RBP17.7■□□□□ 0.42
SCAF1-203ENST00000598359 GJA3Q9Y6H8 435 aa17.7■□□□□ 0.42
SCAF1-203ENST00000598359 PI4KAP2A4QPH2 592 aa17.69■□□□□ 0.42
SCAF1-203ENST00000598359 DDX58O95786 925 aaKnown RBP17.69■□□□□ 0.42
SCAF1-203ENST00000598359 SF3B3Q15393 1217 aaKnown RBP17.69■□□□□ 0.42
SCAF1-203ENST00000598359 GRIPAP1Q4V328 841 aa17.69■□□□□ 0.42
SCAF1-203ENST00000598359 DPP8Q6V1X1 898 aaPredicted RBP17.69■□□□□ 0.42
SCAF1-203ENST00000598359 PI4KAP1Q8N8J0 262 aa17.69■□□□□ 0.42
SCAF1-203ENST00000598359 ZBTB38Q8NAP3 1195 aaPredicted RBP17.69■□□□□ 0.42
SCAF1-203ENST00000598359 SLC4A2P04920 1241 aa17.68■□□□□ 0.42
SCAF1-203ENST00000598359 EIF6P56537 245 aaKnown RBP17.68■□□□□ 0.42
SCAF1-203ENST00000598359 EXOSC9Q06265 439 aaKnown RBP17.68■□□□□ 0.42
SCAF1-203ENST00000598359 NCBP3Q53F19 620 aaKnown RBP17.68■□□□□ 0.42
SCAF1-203ENST00000598359 EAPPQ56P03 285 aaPredicted RBP17.68■□□□□ 0.42
SCAF1-203ENST00000598359 KSR2Q6VAB6 950 aa17.68■□□□□ 0.42
SCAF1-203ENST00000598359 WDR63Q8IWG1 891 aa17.68■□□□□ 0.42
SCAF1-203ENST00000598359 NIM1KQ8IY84 436 aa17.68■□□□□ 0.42
SCAF1-203ENST00000598359 MPNDQ8N594 471 aa17.68■□□□□ 0.42
SCAF1-203ENST00000598359 CCDC85AQ96PX6 553 aaPredicted RBP17.68■□□□□ 0.42
SCAF1-203ENST00000598359 CWC25Q9NXE8 425 aaPredicted RBP17.68■□□□□ 0.42
SCAF1-203ENST00000598359 IQCA1LA6NCM1 817 aa17.67■□□□□ 0.42
SCAF1-203ENST00000598359 IGKV5-2P06315 115 aa17.67■□□□□ 0.42
SCAF1-203ENST00000598359 CHADLQ6NUI6 762 aa17.67■□□□□ 0.42
SCAF1-203ENST00000598359 GPC2Q8N158 579 aa17.67■□□□□ 0.42
SCAF1-203ENST00000598359 CCDC191Q8NCU4 936 aa17.67■□□□□ 0.42
SCAF1-203ENST00000598359 RTFDC1Q9BY42 306 aaPredicted RBP17.67■□□□□ 0.42
SCAF1-203ENST00000598359 CHMP4AQ9BY43 222 aa17.67■□□□□ 0.42
SCAF1-203ENST00000598359 SEC31BQ9NQW1 1179 aa17.67■□□□□ 0.42
SCAF1-203ENST00000598359 HACL1Q9UJ83 578 aa17.67■□□□□ 0.42
SCAF1-203ENST00000598359 PCCAP05165 728 aaPredicted RBP17.66■□□□□ 0.42
SCAF1-203ENST00000598359 EPHX2P34913 555 aa17.66■□□□□ 0.42
SCAF1-203ENST00000598359 CWF19L2Q2TBE0 894 aaKnown RBP17.66■□□□□ 0.42
SCAF1-203ENST00000598359 DUOX1Q9NRD9 1551 aa17.66■□□□□ 0.42
SCAF1-203ENST00000598359 VAMP4O75379 141 aa17.65■□□□□ 0.42
SCAF1-203ENST00000598359 SCN4AP35499 1836 aa17.65■□□□□ 0.42
SCAF1-203ENST00000598359 LRRC37AA6NMS7 1700 aa17.64■□□□□ 0.41
SCAF1-203ENST00000598359 LTBP1Q14766 1721 aa17.64■□□□□ 0.41
SCAF1-203ENST00000598359 GPSM2P81274 684 aa17.64■□□□□ 0.41
SCAF1-203ENST00000598359 FLIIQ13045 1269 aa17.64■□□□□ 0.41
SCAF1-203ENST00000598359 SUPT20HQ8NEM7 779 aa17.64■□□□□ 0.41
SCAF1-203ENST00000598359 GPR101Q96P66 508 aaPredicted RBP17.64■□□□□ 0.41
SCAF1-203ENST00000598359 NSFL1CQ9UNZ2 370 aaKnown RBP17.64■□□□□ 0.41
SCAF1-203ENST00000598359 CLEC11AQ9Y240 323 aa17.64■□□□□ 0.41
SCAF1-203ENST00000598359 SCNN1DP51172 638 aa17.63■□□□□ 0.41
SCAF1-203ENST00000598359 KIAA2012Q0VF49 1180 aa17.63■□□□□ 0.41
SCAF1-203ENST00000598359 TMC4Q7Z404 712 aa17.63■□□□□ 0.41
SCAF1-203ENST00000598359 LDHDQ86WU2 507 aa17.63■□□□□ 0.41
SCAF1-203ENST00000598359 MKRN1Q9UHC7 482 aaKnown RBP17.63■□□□□ 0.41
SCAF1-203ENST00000598359 NEURL1BA8MQ27 555 aa17.62■□□□□ 0.41
SCAF1-203ENST00000598359 RIMBP2O15034 1052 aa17.62■□□□□ 0.41
SCAF1-203ENST00000598359 FOXN1O15353 648 aa17.62■□□□□ 0.41
SCAF1-203ENST00000598359 PDE8AO60658 829 aa17.62■□□□□ 0.41
SCAF1-203ENST00000598359 EPS15P42566 896 aa17.62■□□□□ 0.41
SCAF1-203ENST00000598359 RPS8P62241 208 aaKnown RBP17.62■□□□□ 0.41
SCAF1-203ENST00000598359 CXCL9Q07325 125 aa17.62■□□□□ 0.41
SCAF1-203ENST00000598359 NEXNQ0ZGT2 675 aa17.62■□□□□ 0.41
SCAF1-203ENST00000598359 FKBP5Q13451 457 aaPredicted RBP17.62■□□□□ 0.41
SCAF1-203ENST00000598359 ZNRF3Q9ULT6 936 aa17.62■□□□□ 0.41
SCAF1-203ENST00000598359 C6orf229H3BNL8 230 aa17.61■□□□□ 0.41
SCAF1-203ENST00000598359 RAD17O75943 681 aa17.61■□□□□ 0.41
SCAF1-203ENST00000598359 CCDC152Q4G0S7 254 aa17.61■□□□□ 0.41
SCAF1-203ENST00000598359 VPS33BQ9H267 617 aa17.61■□□□□ 0.41
SCAF1-203ENST00000598359 PRDM10Q9NQV6 1147 aa17.61■□□□□ 0.41
SCAF1-203ENST00000598359 CREBZFQ9NS37 354 aa17.61■□□□□ 0.41
SCAF1-203ENST00000598359 POLLQ9UGP5 575 aa17.61■□□□□ 0.41
SCAF1-203ENST00000598359 YDJCA8MPS7 323 aa17.6■□□□□ 0.41
SCAF1-203ENST00000598359 LMOD1P29536 600 aaPredicted RBP17.6■□□□□ 0.41
SCAF1-203ENST00000598359 MAP1SQ66K74 1059 aaPredicted RBP17.6■□□□□ 0.41
SCAF1-203ENST00000598359 MYH16Q9H6N6 1097 aa17.6■□□□□ 0.41
SCAF1-203ENST00000598359 ADAMTSL1Q8N6G6 1762 aa17.6■□□□□ 0.41
SCAF1-203ENST00000598359 CDHR2Q9BYE9 1310 aa17.59■□□□□ 0.41
SCAF1-203ENST00000598359 F6X3S4 739 aa17.59■□□□□ 0.41
SCAF1-203ENST00000598359 HSP90B1P14625 803 aaKnown RBP17.59■□□□□ 0.41
SCAF1-203ENST00000598359 GMPSP49915 693 aaPredicted RBP17.59■□□□□ 0.41
SCAF1-203ENST00000598359 CTSWP56202 376 aa17.59■□□□□ 0.41
SCAF1-203ENST00000598359 WASHC4Q2M389 1173 aa17.59■□□□□ 0.41
SCAF1-203ENST00000598359 UBE3BQ7Z3V4 1068 aa17.59■□□□□ 0.41
SCAF1-203ENST00000598359 DNAAF4Q8WXU2 420 aa17.59■□□□□ 0.41
SCAF1-203ENST00000598359 DBNDD1Q9H9R9 158 aa17.59■□□□□ 0.41
SCAF1-203ENST00000598359 ZNF521Q96K83 1311 aa17.58■□□□□ 0.4
SCAF1-203ENST00000598359 ITGBL1O95965 494 aaPredicted RBP17.58■□□□□ 0.4
SCAF1-203ENST00000598359 GCKRQ14397 625 aa17.58■□□□□ 0.4
SCAF1-203ENST00000598359 DOK7Q18PE1 504 aa17.58■□□□□ 0.4
SCAF1-203ENST00000598359 CIAPIN1Q6FI81 312 aa17.58■□□□□ 0.4
SCAF1-203ENST00000598359 PNMA8AQ86V59 439 aaPredicted RBP17.58■□□□□ 0.4
SCAF1-203ENST00000598359 TBC1D16Q8TBP0 767 aa17.58■□□□□ 0.4
SCAF1-203ENST00000598359 PASKQ96RG2 1323 aa17.57■□□□□ 0.4
SCAF1-203ENST00000598359 H7C1W4 665 aa17.57■□□□□ 0.4
SCAF1-203ENST00000598359 MIER1Q8N108 512 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms