RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 KIAA2012Q0VF49 1180 aa22.16■■□□□ 1.14
PNKP-210ENST00000597965 NECTIN2Q92692 538 aa22.16■■□□□ 1.14
PNKP-210ENST00000597965 DBF4Q9UBU7 674 aaPredicted RBP22.16■■□□□ 1.14
PNKP-210ENST00000597965 CXCL9Q07325 125 aa22.15■■□□□ 1.14
PNKP-210ENST00000597965 CIAPIN1Q6FI81 312 aa22.15■■□□□ 1.14
PNKP-210ENST00000597965 PLBD2Q8NHP8 589 aa22.15■■□□□ 1.14
PNKP-210ENST00000597965 LAS1LQ9Y4W2 734 aaKnown RBP22.15■■□□□ 1.14
PNKP-210ENST00000597965 TRPM7Q96QT4 1865 aa22.15■■□□□ 1.14
PNKP-210ENST00000597965 HDGFL1Q5TGJ6 251 aa22.14■■□□□ 1.13
PNKP-210ENST00000597965 ANKRD13DQ6ZTN6 518 aa22.14■■□□□ 1.13
PNKP-210ENST00000597965 PAXIP1Q6ZW49 1069 aaPredicted RBP22.14■■□□□ 1.13
PNKP-210ENST00000597965 ZC3H15Q8WU90 426 aaKnown RBP22.14■■□□□ 1.13
PNKP-210ENST00000597965 BCL2L13Q9BXK5 485 aa22.14■■□□□ 1.13
PNKP-210ENST00000597965 LAMB2P55268 1798 aa22.14■■□□□ 1.13
PNKP-210ENST00000597965 HSP90B1P14625 803 aaKnown RBP22.13■■□□□ 1.13
PNKP-210ENST00000597965 LBX1P52954 281 aa22.13■■□□□ 1.13
PNKP-210ENST00000597965 HYPKQ9NX55 129 aa22.13■■□□□ 1.13
PNKP-210ENST00000597965 CHPF2Q9P2E5 772 aa22.13■■□□□ 1.13
PNKP-210ENST00000597965 GMPSP49915 693 aaPredicted RBP22.12■■□□□ 1.13
PNKP-210ENST00000597965 CCDC146Q8IYE0 955 aa22.12■■□□□ 1.13
PNKP-210ENST00000597965 CAPNS2Q96L46 248 aa22.12■■□□□ 1.13
PNKP-210ENST00000597965 TLL2Q9Y6L7 1015 aa22.12■■□□□ 1.13
PNKP-210ENST00000597965 CFAP44Q96MT7 982 aa22.11■■□□□ 1.13
PNKP-210ENST00000597965 GPR101Q96P66 508 aaPredicted RBP22.11■■□□□ 1.13
PNKP-210ENST00000597965 H7C1D1 291 aa22.1■■□□□ 1.13
PNKP-210ENST00000597965 MAP2K2P36507 400 aa22.1■■□□□ 1.13
PNKP-210ENST00000597965 CST9Q5W186 159 aa22.1■■□□□ 1.13
PNKP-210ENST00000597965 CHMP4AQ9BY43 222 aa22.1■■□□□ 1.13
PNKP-210ENST00000597965 PGAP2Q9UHJ9 254 aa22.1■■□□□ 1.13
PNKP-210ENST00000597965 TRIM35Q9UPQ4 493 aa22.1■■□□□ 1.13
PNKP-210ENST00000597965 HHIPL1Q96JK4 782 aa22.09■■□□□ 1.13
PNKP-210ENST00000597965 TRAF5O00463 557 aa22.08■■□□□ 1.13
PNKP-210ENST00000597965 RAD17O75943 681 aa22.08■■□□□ 1.13
PNKP-210ENST00000597965 HSPA8P11142 646 aaKnown RBP22.08■■□□□ 1.13
PNKP-210ENST00000597965 CALD1Q05682 793 aaKnown RBP22.08■■□□□ 1.13
PNKP-210ENST00000597965 DDX10Q13206 875 aaKnown RBP22.08■■□□□ 1.13
PNKP-210ENST00000597965 SF3B3Q15393 1217 aaKnown RBP22.08■■□□□ 1.13
PNKP-210ENST00000597965 WASHC4Q2M389 1173 aa22.08■■□□□ 1.13
PNKP-210ENST00000597965 CDC37L1Q7L3B6 337 aa22.08■■□□□ 1.13
PNKP-210ENST00000597965 SLC51AQ86UW1 340 aa22.08■■□□□ 1.13
PNKP-210ENST00000597965 ISCA1Q9BUE6 129 aa22.08■■□□□ 1.13
PNKP-210ENST00000597965 THSD7BQ9C0I4 1608 aa22.08■■□□□ 1.13
PNKP-210ENST00000597965 CELF2O95319 508 aaKnown RBP22.07■■□□□ 1.12
PNKP-210ENST00000597965 TRIM28Q13263 835 aaKnown RBP22.07■■□□□ 1.12
PNKP-210ENST00000597965 KRT24Q2M2I5 525 aa22.07■■□□□ 1.12
PNKP-210ENST00000597965 EYA3Q99504 573 aa22.07■■□□□ 1.12
PNKP-210ENST00000597965 CNOT7Q9UIV1 285 aaKnown RBP22.07■■□□□ 1.12
PNKP-210ENST00000597965 NSFL1CQ9UNZ2 370 aaKnown RBP22.07■■□□□ 1.12
PNKP-210ENST00000597965 LRRC37AA6NMS7 1700 aa22.06■■□□□ 1.12
PNKP-210ENST00000597965 CA12O43570 354 aa22.06■■□□□ 1.12
PNKP-210ENST00000597965 GRM1Q13255 1194 aa22.06■■□□□ 1.12
PNKP-210ENST00000597965 CYP4F22Q6NT55 531 aa22.06■■□□□ 1.12
PNKP-210ENST00000597965 SAPCD2Q86UD0 394 aa22.06■■□□□ 1.12
PNKP-210ENST00000597965 DPF2Q92785 391 aa22.06■■□□□ 1.12
PNKP-210ENST00000597965 FAM89AQ96GI7 184 aa22.06■■□□□ 1.12
PNKP-210ENST00000597965 GOLGA2Q08379 1002 aa22.05■■□□□ 1.12
PNKP-210ENST00000597965 DUSP27Q5VZP5 1158 aa22.05■■□□□ 1.12
PNKP-210ENST00000597965 ADAMTS8Q9UP79 889 aa22.05■■□□□ 1.12
PNKP-210ENST00000597965 DDX60Q8IY21 1712 aaKnown RBP22.04■■□□□ 1.12
PNKP-210ENST00000597965 RPS12P25398 132 aaKnown RBP22.04■■□□□ 1.12
PNKP-210ENST00000597965 FMR1Q06787 632 aaKnown RBP eCLIP22.04■■□□□ 1.12
PNKP-210ENST00000597965 ATP5J2-PTCD1G3V325 749 aa22.03■■□□□ 1.12
PNKP-210ENST00000597965 C6orf229H3BNL8 230 aa22.03■■□□□ 1.12
PNKP-210ENST00000597965 RIC3Q7Z5B4 369 aa22.03■■□□□ 1.12
PNKP-210ENST00000597965 MICALL2Q8IY33 904 aa22.03■■□□□ 1.12
PNKP-210ENST00000597965 GLIS2Q9BZE0 524 aaPredicted RBP22.03■■□□□ 1.12
PNKP-210ENST00000597965 YDJCA8MPS7 323 aa22.02■■□□□ 1.12
PNKP-210ENST00000597965 IRS4O14654 1257 aaPredicted RBP22.02■■□□□ 1.12
PNKP-210ENST00000597965 ZBTB38Q8NAP3 1195 aaPredicted RBP22.02■■□□□ 1.12
PNKP-210ENST00000597965 CELF1Q92879 486 aaKnown RBP22.02■■□□□ 1.12
PNKP-210ENST00000597965 TAF1P21675 1872 aa22.02■■□□□ 1.12
PNKP-210ENST00000597965 DUOX1Q9NRD9 1551 aa22.01■■□□□ 1.11
PNKP-210ENST00000597965 RPS8P62241 208 aaKnown RBP22.01■■□□□ 1.11
PNKP-210ENST00000597965 GNAI1P63096 354 aa22.01■■□□□ 1.11
PNKP-210ENST00000597965 MBIPQ9NS73 344 aa22.01■■□□□ 1.11
PNKP-210ENST00000597965 IFT57Q9NWB7 429 aa22.01■■□□□ 1.11
PNKP-210ENST00000597965 HIRAP54198 1017 aaPredicted RBP22■■□□□ 1.11
PNKP-210ENST00000597965 BRPF1P55201 1214 aaPredicted RBP22■■□□□ 1.11
PNKP-210ENST00000597965 ZC3H12CQ9C0D7 883 aaKnown RBP22■■□□□ 1.11
PNKP-210ENST00000597965 ZNF408Q9H9D4 720 aa22■■□□□ 1.11
PNKP-210ENST00000597965 G3V3G9 751 aa21.99■■□□□ 1.11
PNKP-210ENST00000597965 PSMD14O00487 310 aa21.99■■□□□ 1.11
PNKP-210ENST00000597965 DCAF8Q5TAQ9 597 aa21.99■■□□□ 1.11
PNKP-210ENST00000597965 CCDC191Q8NCU4 936 aa21.99■■□□□ 1.11
PNKP-210ENST00000597965 TRPM4Q8TD43 1214 aa21.99■■□□□ 1.11
PNKP-210ENST00000597965 ABHD8Q96I13 439 aa21.99■■□□□ 1.11
PNKP-210ENST00000597965 DBNDD1Q9H9R9 158 aa21.99■■□□□ 1.11
PNKP-210ENST00000597965 RIMBP2O15034 1052 aa21.98■■□□□ 1.11
PNKP-210ENST00000597965 ECE2O60344 883 aa21.98■■□□□ 1.11
PNKP-210ENST00000597965 DDX58O95786 925 aaKnown RBP21.98■■□□□ 1.11
PNKP-210ENST00000597965 ZNF853P0CG23 659 aa21.98■■□□□ 1.11
PNKP-210ENST00000597965 GPSM2P81274 684 aa21.98■■□□□ 1.11
PNKP-210ENST00000597965 NOGQ13253 232 aa21.98■■□□□ 1.11
PNKP-210ENST00000597965 CCDC152Q4G0S7 254 aa21.98■■□□□ 1.11
PNKP-210ENST00000597965 RTL5Q5HYW3 569 aaPredicted RBP21.98■■□□□ 1.11
PNKP-210ENST00000597965 DCPSQ96C86 337 aaKnown RBP21.98■■□□□ 1.11
PNKP-210ENST00000597965 PODXL2Q9NZ53 605 aa21.98■■□□□ 1.11
PNKP-210ENST00000597965 POLLQ9UGP5 575 aa21.98■■□□□ 1.11
PNKP-210ENST00000597965 ANKIB1Q9P2G1 1089 aa21.97■■□□□ 1.11
PNKP-210ENST00000597965 ZBTB12Q9Y330 459 aaPredicted RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms