RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 PLBD2Q8NHP8 589 aa20.96■□□□□ 0.95
LIM2-202ENST00000596399 GRAPLQ8TC17 118 aaPredicted RBP20.96■□□□□ 0.95
LIM2-202ENST00000596399 ZNRF3Q9ULT6 936 aa20.96■□□□□ 0.95
LIM2-202ENST00000596399 COL4A1P02462 1669 aa20.96■□□□□ 0.95
LIM2-202ENST00000596399 CFAP44Q96MT7 982 aa20.95■□□□□ 0.94
LIM2-202ENST00000596399 ISCA1Q9BUE6 129 aa20.95■□□□□ 0.94
LIM2-202ENST00000596399 PRKRIP1Q9H875 184 aaPredicted RBP20.95■□□□□ 0.94
LIM2-202ENST00000596399 ABT1Q9ULW3 272 aaKnown RBP20.95■□□□□ 0.94
LIM2-202ENST00000596399 DDX60Q8IY21 1712 aaKnown RBP20.95■□□□□ 0.94
LIM2-202ENST00000596399 RAD17O75943 681 aa20.94■□□□□ 0.94
LIM2-202ENST00000596399 GMPSP49915 693 aaPredicted RBP20.94■□□□□ 0.94
LIM2-202ENST00000596399 DEFB115Q30KQ5 88 aa20.94■□□□□ 0.94
LIM2-202ENST00000596399 GPRC5DQ9NZD1 345 aa20.94■□□□□ 0.94
LIM2-202ENST00000596399 DBF4Q9UBU7 674 aaPredicted RBP20.94■□□□□ 0.94
LIM2-202ENST00000596399 RASSF10A6NK89 507 aa20.93■□□□□ 0.94
LIM2-202ENST00000596399 ELL2O00472 640 aaPredicted RBP20.93■□□□□ 0.94
LIM2-202ENST00000596399 APAF1O14727 1248 aa20.93■□□□□ 0.94
LIM2-202ENST00000596399 KIAA2012Q0VF49 1180 aa20.93■□□□□ 0.94
LIM2-202ENST00000596399 USP50Q70EL3 339 aaPredicted RBP20.93■□□□□ 0.94
LIM2-202ENST00000596399 SUPT20HQ8NEM7 779 aa20.93■□□□□ 0.94
LIM2-202ENST00000596399 CELF1Q92879 486 aaKnown RBP20.93■□□□□ 0.94
LIM2-202ENST00000596399 DUOX1Q9NRD9 1551 aa20.93■□□□□ 0.94
LIM2-202ENST00000596399 SHTN1A0MZ66 631 aa20.92■□□□□ 0.94
LIM2-202ENST00000596399 YDJCA8MPS7 323 aa20.92■□□□□ 0.94
LIM2-202ENST00000596399 HOXB7P09629 217 aa20.92■□□□□ 0.94
LIM2-202ENST00000596399 ZNF853P0CG23 659 aa20.92■□□□□ 0.94
LIM2-202ENST00000596399 CST9Q5W186 159 aa20.92■□□□□ 0.94
LIM2-202ENST00000596399 VPS33BQ9H267 617 aa20.92■□□□□ 0.94
LIM2-202ENST00000596399 PHAXQ9H814 394 aaKnown RBP20.91■□□□□ 0.94
LIM2-202ENST00000596399 ADARB2Q9NS39 739 aaKnown RBP20.91■□□□□ 0.94
LIM2-202ENST00000596399 HYPKQ9NX55 129 aa20.91■□□□□ 0.94
LIM2-202ENST00000596399 WBP1LQ9NX94 342 aa20.91■□□□□ 0.94
LIM2-202ENST00000596399 WDR33Q9C0J8 1336 aaKnown RBP20.9■□□□□ 0.94
LIM2-202ENST00000596399 CIAPIN1Q6FI81 312 aa20.9■□□□□ 0.94
LIM2-202ENST00000596399 HIRAP54198 1017 aaPredicted RBP20.89■□□□□ 0.93
LIM2-202ENST00000596399 LRRC37AA6NMS7 1700 aa20.88■□□□□ 0.93
LIM2-202ENST00000596399 GRM1Q13255 1194 aa20.88■□□□□ 0.93
LIM2-202ENST00000596399 SF3B3Q15393 1217 aaKnown RBP20.88■□□□□ 0.93
LIM2-202ENST00000596399 JARID2Q92833 1246 aaPredicted RBP20.88■□□□□ 0.93
LIM2-202ENST00000596399 AIDAQ96BJ3 306 aa20.88■□□□□ 0.93
LIM2-202ENST00000596399 GPR101Q96P66 508 aaPredicted RBP20.88■□□□□ 0.93
LIM2-202ENST00000596399 BCL2L13Q9BXK5 485 aa20.88■□□□□ 0.93
LIM2-202ENST00000596399 NSFL1CQ9UNZ2 370 aaKnown RBP20.88■□□□□ 0.93
LIM2-202ENST00000596399 ZBTB12Q9Y330 459 aaPredicted RBP20.88■□□□□ 0.93
LIM2-202ENST00000596399 IRS4O14654 1257 aaPredicted RBP20.87■□□□□ 0.93
LIM2-202ENST00000596399 RIMBP2O15034 1052 aa20.87■□□□□ 0.93
LIM2-202ENST00000596399 LBX1P52954 281 aa20.87■□□□□ 0.93
LIM2-202ENST00000596399 GPSM2P81274 684 aa20.87■□□□□ 0.93
LIM2-202ENST00000596399 CYP4F22Q6NT55 531 aa20.87■□□□□ 0.93
LIM2-202ENST00000596399 PAXIP1Q6ZW49 1069 aaPredicted RBP20.87■□□□□ 0.93
LIM2-202ENST00000596399 C8orf58Q8NAV2 365 aa20.87■□□□□ 0.93
LIM2-202ENST00000596399 TRPM4Q8TD43 1214 aa20.87■□□□□ 0.93
LIM2-202ENST00000596399 GLIS2Q9BZE0 524 aaPredicted RBP20.87■□□□□ 0.93
LIM2-202ENST00000596399 DBNDD1Q9H9R9 158 aa20.87■□□□□ 0.93
LIM2-202ENST00000596399 KCNQ5Q9NR82 932 aa20.87■□□□□ 0.93
LIM2-202ENST00000596399 POLLQ9UGP5 575 aa20.87■□□□□ 0.93
LIM2-202ENST00000596399 CTCFP49711 727 aaPredicted RBP20.86■□□□□ 0.93
LIM2-202ENST00000596399 RIC3Q7Z5B4 369 aa20.86■□□□□ 0.93
LIM2-202ENST00000596399 IFT57Q9NWB7 429 aa20.86■□□□□ 0.93
LIM2-202ENST00000596399 TRIM28Q13263 835 aaKnown RBP20.85■□□□□ 0.93
LIM2-202ENST00000596399 TNIP1Q15025 636 aa20.85■□□□□ 0.93
LIM2-202ENST00000596399 WASHC4Q2M389 1173 aa20.85■□□□□ 0.93
LIM2-202ENST00000596399 CCDC184Q52MB2 194 aa20.85■□□□□ 0.93
LIM2-202ENST00000596399 DLK2Q6UY11 383 aa20.85■□□□□ 0.93
LIM2-202ENST00000596399 TMC4Q7Z404 712 aa20.85■□□□□ 0.93
LIM2-202ENST00000596399 CAPNS2Q96L46 248 aa20.85■□□□□ 0.93
LIM2-202ENST00000596399 MYD88Q99836 296 aa20.85■□□□□ 0.93
LIM2-202ENST00000596399 SEC31BQ9NQW1 1179 aa20.85■□□□□ 0.93
LIM2-202ENST00000596399 CNOT7Q9UIV1 285 aaKnown RBP20.85■□□□□ 0.93
LIM2-202ENST00000596399 C6orf229H3BNL8 230 aa20.84■□□□□ 0.93
LIM2-202ENST00000596399 GNAI1P63096 354 aa20.84■□□□□ 0.93
LIM2-202ENST00000596399 DOK7Q18PE1 504 aa20.84■□□□□ 0.93
LIM2-202ENST00000596399 PRDM10Q9NQV6 1147 aa20.84■□□□□ 0.93
LIM2-202ENST00000596399 TRPM7Q96QT4 1865 aa20.84■□□□□ 0.93
LIM2-202ENST00000596399 PSMD14O00487 310 aa20.83■□□□□ 0.93
LIM2-202ENST00000596399 CELF2O95319 508 aaKnown RBP20.83■□□□□ 0.93
LIM2-202ENST00000596399 HSPA8P11142 646 aaKnown RBP20.83■□□□□ 0.93
LIM2-202ENST00000596399 GOLGA2Q08379 1002 aa20.83■□□□□ 0.93
LIM2-202ENST00000596399 MICALL2Q8IY33 904 aa20.83■□□□□ 0.93
LIM2-202ENST00000596399 CCDC85AQ96PX6 553 aaPredicted RBP20.83■□□□□ 0.93
LIM2-202ENST00000596399 PGAP2Q9UHJ9 254 aa20.83■□□□□ 0.93
LIM2-202ENST00000596399 TLL2Q9Y6L7 1015 aa20.83■□□□□ 0.93
LIM2-202ENST00000596399 AOC2O75106 756 aa20.82■□□□□ 0.92
LIM2-202ENST00000596399 EGFRP00533 1210 aa20.82■□□□□ 0.92
LIM2-202ENST00000596399 RPS8P62241 208 aaKnown RBP20.82■□□□□ 0.92
LIM2-202ENST00000596399 SAMD7Q7Z3H4 446 aa20.82■□□□□ 0.92
LIM2-202ENST00000596399 TSPYL6Q8N831 410 aa20.82■□□□□ 0.92
LIM2-202ENST00000596399 ZBTB38Q8NAP3 1195 aaPredicted RBP20.82■□□□□ 0.92
LIM2-202ENST00000596399 ZNF408Q9H9D4 720 aa20.82■□□□□ 0.92
LIM2-202ENST00000596399 TBC1D16Q8TBP0 767 aa20.81■□□□□ 0.92
LIM2-202ENST00000596399 CDHR2Q9BYE9 1310 aa20.8■□□□□ 0.92
LIM2-202ENST00000596399 ECE2O60344 883 aa20.8■□□□□ 0.92
LIM2-202ENST00000596399 MAP2K1Q02750 393 aaPredicted RBP20.8■□□□□ 0.92
LIM2-202ENST00000596399 TSR2Q969E8 191 aaKnown RBP20.8■□□□□ 0.92
LIM2-202ENST00000596399 RTL9Q8NET4 1388 aa20.8■□□□□ 0.92
LIM2-202ENST00000596399 TBC1D10BQ4KMP7 808 aaPredicted RBP20.79■□□□□ 0.92
LIM2-202ENST00000596399 SAPCD2Q86UD0 394 aa20.79■□□□□ 0.92
LIM2-202ENST00000596399 USP48Q86UV5 1035 aa20.79■□□□□ 0.92
LIM2-202ENST00000596399 THSD7BQ9C0I4 1608 aa20.78■□□□□ 0.92
LIM2-202ENST00000596399 H7C1D1 291 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms