RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 SLC4A10Q6U841 1118 aa23.14■■□□□ 1.29
ZNF558-204ENST00000596172 TAOK3Q9H2K8 898 aa23.14■■□□□ 1.29
ZNF558-204ENST00000596172 ATP6V0A2Q9Y487 856 aa23.14■■□□□ 1.29
ZNF558-204ENST00000596172 RASSF7Q02833 373 aa23.13■■□□□ 1.29
ZNF558-204ENST00000596172 SP8Q8IXZ3 490 aa23.13■■□□□ 1.29
ZNF558-204ENST00000596172 ARHGAP45Q92619 1136 aa23.13■■□□□ 1.29
ZNF558-204ENST00000596172 NOB1Q9ULX3 412 aaKnown RBP23.13■■□□□ 1.29
ZNF558-204ENST00000596172 PRELPP51888 382 aa23.12■■□□□ 1.29
ZNF558-204ENST00000596172 CTSWP56202 376 aa23.12■■□□□ 1.29
ZNF558-204ENST00000596172 FKBP4Q02790 459 aaKnown RBP eCLIP23.12■■□□□ 1.29
ZNF558-204ENST00000596172 OLFM4Q6UX06 510 aa23.12■■□□□ 1.29
ZNF558-204ENST00000596172 TTLL11Q8NHH1 800 aa23.12■■□□□ 1.29
ZNF558-204ENST00000596172 SNED1Q8TER0 1413 aa23.12■■□□□ 1.29
ZNF558-204ENST00000596172 KIF16BQ96L93 1317 aa23.11■■□□□ 1.29
ZNF558-204ENST00000596172 GRM8O00222 908 aa23.11■■□□□ 1.29
ZNF558-204ENST00000596172 ZNF784Q8NCA9 323 aaPredicted RBP23.11■■□□□ 1.29
ZNF558-204ENST00000596172 PSMD1Q99460 953 aa23.11■■□□□ 1.29
ZNF558-204ENST00000596172 API5Q9BZZ5 524 aaKnown RBP23.11■■□□□ 1.29
ZNF558-204ENST00000596172 TMX4Q9H1E5 349 aaPredicted RBP23.11■■□□□ 1.29
ZNF558-204ENST00000596172 RNF181Q9P0P0 153 aa23.11■■□□□ 1.29
ZNF558-204ENST00000596172 LAMB2P55268 1798 aa23.11■■□□□ 1.29
ZNF558-204ENST00000596172 ZC3H4Q9UPT8 1303 aaKnown RBP23.1■■□□□ 1.29
ZNF558-204ENST00000596172 RPS8P62241 208 aaKnown RBP23.1■■□□□ 1.29
ZNF558-204ENST00000596172 RTL9Q8NET4 1388 aa23.1■■□□□ 1.29
ZNF558-204ENST00000596172 CSF1RP07333 972 aa23.09■■□□□ 1.29
ZNF558-204ENST00000596172 CELF1Q92879 486 aaKnown RBP23.09■■□□□ 1.29
ZNF558-204ENST00000596172 C9orf78Q9NZ63 289 aaPredicted RBP23.09■■□□□ 1.29
ZNF558-204ENST00000596172 FER1L6Q2WGJ9 1857 aa23.09■■□□□ 1.29
ZNF558-204ENST00000596172 UTYO14607 1347 aa23.08■■□□□ 1.29
ZNF558-204ENST00000596172 IPO8O15397 1037 aaKnown RBP23.08■■□□□ 1.29
ZNF558-204ENST00000596172 SEC31BQ9NQW1 1179 aa23.07■■□□□ 1.28
ZNF558-204ENST00000596172 BCAR3O75815 825 aa23.06■■□□□ 1.28
ZNF558-204ENST00000596172 CCT4P50991 539 aaKnown RBP23.06■■□□□ 1.28
ZNF558-204ENST00000596172 RTFDC1Q9BY42 306 aaPredicted RBP23.06■■□□□ 1.28
ZNF558-204ENST00000596172 CACNA1SQ13698 1873 aa23.06■■□□□ 1.28
ZNF558-204ENST00000596172 FOXO4P98177 505 aa23.05■■□□□ 1.28
ZNF558-204ENST00000596172 CDC5LQ99459 802 aaKnown RBP23.05■■□□□ 1.28
ZNF558-204ENST00000596172 VPS33BQ9H267 617 aa23.05■■□□□ 1.28
ZNF558-204ENST00000596172 GREM2Q9H772 168 aa23.05■■□□□ 1.28
ZNF558-204ENST00000596172 SBF1O95248 1867 aa23.05■■□□□ 1.28
ZNF558-204ENST00000596172 MPNDQ8N594 471 aa23.04■■□□□ 1.28
ZNF558-204ENST00000596172 CCDC85AQ96PX6 553 aaPredicted RBP23.04■■□□□ 1.28
ZNF558-204ENST00000596172 ZNF277Q9NRM2 450 aaPredicted RBP23.04■■□□□ 1.28
ZNF558-204ENST00000596172 NBPF7P0C2Y1 421 aaPredicted RBP23.03■■□□□ 1.28
ZNF558-204ENST00000596172 DPP8Q6V1X1 898 aaPredicted RBP23.03■■□□□ 1.28
ZNF558-204ENST00000596172 SLC51AQ86UW1 340 aa23.03■■□□□ 1.28
ZNF558-204ENST00000596172 ANKRD18AQ8IVF6 992 aa23.03■■□□□ 1.28
ZNF558-204ENST00000596172 SUPT20HQ8NEM7 779 aa23.03■■□□□ 1.28
ZNF558-204ENST00000596172 USP44Q9H0E7 712 aa23.03■■□□□ 1.28
ZNF558-204ENST00000596172 IARSP41252 1262 aaKnown RBP23.02■■□□□ 1.28
ZNF558-204ENST00000596172 ATF7IPQ6VMQ6 1270 aa23.02■■□□□ 1.28
ZNF558-204ENST00000596172 INTS3Q68E01 1043 aaKnown RBP23.01■■□□□ 1.27
ZNF558-204ENST00000596172 BSDC1Q9NW68 430 aaPredicted RBP23.01■■□□□ 1.27
ZNF558-204ENST00000596172 TRIM27P14373 513 aa23■■□□□ 1.27
ZNF558-204ENST00000596172 ITGA6P23229 1130 aa23■■□□□ 1.27
ZNF558-204ENST00000596172 EPHA10Q5JZY3 1008 aa23■■□□□ 1.27
ZNF558-204ENST00000596172 LMBR1LQ6UX01 489 aa23■■□□□ 1.27
ZNF558-204ENST00000596172 KAZALD1Q96I82 304 aa23■■□□□ 1.27
ZNF558-204ENST00000596172 PODXL2Q9NZ53 605 aa23■■□□□ 1.27
ZNF558-204ENST00000596172 FAM161AQ3B820 660 aa22.99■■□□□ 1.27
ZNF558-204ENST00000596172 ZKSCAN2Q63HK3 967 aa22.99■■□□□ 1.27
ZNF558-204ENST00000596172 FRAT1Q92837 279 aaPredicted RBP22.99■■□□□ 1.27
ZNF558-204ENST00000596172 SUCLG2Q96I99 432 aa22.99■■□□□ 1.27
ZNF558-204ENST00000596172 COL4A1P02462 1669 aa22.99■■□□□ 1.27
ZNF558-204ENST00000596172 ANKRD18BA2A2Z9 1011 aa22.98■■□□□ 1.27
ZNF558-204ENST00000596172 GLTPD2A6NH11 291 aa22.98■■□□□ 1.27
ZNF558-204ENST00000596172 IFIT5Q13325 482 aaKnown RBP22.98■■□□□ 1.27
ZNF558-204ENST00000596172 RABL6Q3YEC7 729 aaPredicted RBP22.98■■□□□ 1.27
ZNF558-204ENST00000596172 GPBP1L1Q9HC44 474 aaPredicted RBP22.98■■□□□ 1.27
ZNF558-204ENST00000596172 NSFL1CQ9UNZ2 370 aaKnown RBP22.98■■□□□ 1.27
ZNF558-204ENST00000596172 TAF1P21675 1872 aa22.98■■□□□ 1.27
ZNF558-204ENST00000596172 LRRC37AA6NMS7 1700 aa22.97■■□□□ 1.27
ZNF558-204ENST00000596172 IGHMBP2P38935 993 aaKnown RBP22.97■■□□□ 1.27
ZNF558-204ENST00000596172 GPSM2P81274 684 aa22.97■■□□□ 1.27
ZNF558-204ENST00000596172 JDP2Q8WYK2 163 aa22.97■■□□□ 1.27
ZNF558-204ENST00000596172 KDM2BQ8NHM5 1336 aa22.97■■□□□ 1.27
ZNF558-204ENST00000596172 MYH3P11055 1940 aa22.96■■□□□ 1.27
ZNF558-204ENST00000596172 FZD9O00144 591 aa22.96■■□□□ 1.27
ZNF558-204ENST00000596172 DPY19L2Q6NUT2 758 aa22.96■■□□□ 1.27
ZNF558-204ENST00000596172 HDAC5Q9UQL6 1122 aa22.96■■□□□ 1.27
ZNF558-204ENST00000596172 KIAA2012Q0VF49 1180 aa22.95■■□□□ 1.26
ZNF558-204ENST00000596172 CCDC57Q2TAC2 916 aa22.95■■□□□ 1.26
ZNF558-204ENST00000596172 LARGE2Q8N3Y3 721 aa22.95■■□□□ 1.26
ZNF558-204ENST00000596172 ZNF526Q8TF50 670 aaPredicted RBP22.95■■□□□ 1.26
ZNF558-204ENST00000596172 POLLQ9UGP5 575 aa22.95■■□□□ 1.26
ZNF558-204ENST00000596172 MINPP1Q9UNW1 487 aa22.95■■□□□ 1.26
ZNF558-204ENST00000596172 DICER1Q9UPY3 1922 aaKnown RBP22.94■■□□□ 1.26
ZNF558-204ENST00000596172 PPIP5K2O43314 1243 aa22.94■■□□□ 1.26
ZNF558-204ENST00000596172 ANKRD44Q8N8A2 993 aa22.94■■□□□ 1.26
ZNF558-204ENST00000596172 TBC1D16Q8TBP0 767 aa22.94■■□□□ 1.26
ZNF558-204ENST00000596172 MPHOSPH8Q99549 860 aa22.94■■□□□ 1.26
ZNF558-204ENST00000596172 BICC1Q9H694 974 aaKnown RBP22.94■■□□□ 1.26
ZNF558-204ENST00000596172 ANKIB1Q9P2G1 1089 aa22.94■■□□□ 1.26
ZNF558-204ENST00000596172 CHMP3Q9Y3E7 222 aa22.94■■□□□ 1.26
ZNF558-204ENST00000596172 XDHP47989 1333 aa22.93■■□□□ 1.26
ZNF558-204ENST00000596172 UBTFL1P0CB47 393 aaPredicted RBP22.93■■□□□ 1.26
ZNF558-204ENST00000596172 EYA3Q99504 573 aa22.93■■□□□ 1.26
ZNF558-204ENST00000596172 CCDC88AQ3V6T2 1871 aa22.92■■□□□ 1.26
ZNF558-204ENST00000596172 C6orf229H3BNL8 230 aa22.92■■□□□ 1.26
ZNF558-204ENST00000596172 AOC3Q16853 763 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms