RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 LMOD1P29536 600 aaPredicted RBP22.03■■□□□ 1.12
CCDC9-202ENST00000595659 CNTROBQ8N137 903 aa22.03■■□□□ 1.12
CCDC9-202ENST00000595659 SUPT20HQ8NEM7 779 aa22.03■■□□□ 1.12
CCDC9-202ENST00000595659 JARID2Q92833 1246 aaPredicted RBP22.03■■□□□ 1.12
CCDC9-202ENST00000595659 CELF1Q92879 486 aaKnown RBP22.03■■□□□ 1.12
CCDC9-202ENST00000595659 MYD88Q99836 296 aa22.03■■□□□ 1.12
CCDC9-202ENST00000595659 IRS4O14654 1257 aaPredicted RBP22.02■■□□□ 1.12
CCDC9-202ENST00000595659 CXCL9Q07325 125 aa22.02■■□□□ 1.12
CCDC9-202ENST00000595659 ZNRF3Q9ULT6 936 aa22.01■■□□□ 1.11
CCDC9-202ENST00000595659 HSPA1AP0DMV8 641 aaKnown RBP22■■□□□ 1.11
CCDC9-202ENST00000595659 HSPA1BP0DMV9 641 aaKnown RBP22■■□□□ 1.11
CCDC9-202ENST00000595659 TRIM28Q13263 835 aaKnown RBP22■■□□□ 1.11
CCDC9-202ENST00000595659 SF3B3Q15393 1217 aaKnown RBP22■■□□□ 1.11
CCDC9-202ENST00000595659 COL13A1Q5TAT6 717 aaPredicted RBP22■■□□□ 1.11
CCDC9-202ENST00000595659 TMEM88BA6NKF7 163 aa21.99■■□□□ 1.11
CCDC9-202ENST00000595659 RAD17O75943 681 aa21.99■■□□□ 1.11
CCDC9-202ENST00000595659 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
CCDC9-202ENST00000595659 KIAA2012Q0VF49 1180 aa21.99■■□□□ 1.11
CCDC9-202ENST00000595659 CCDC30Q5VVM6 783 aa21.99■■□□□ 1.11
CCDC9-202ENST00000595659 VPS33BQ9H267 617 aa21.99■■□□□ 1.11
CCDC9-202ENST00000595659 MRS2Q9HD23 443 aa21.99■■□□□ 1.11
CCDC9-202ENST00000595659 ANKRD36CQ5JPF3 1778 aa21.98■■□□□ 1.11
CCDC9-202ENST00000595659 FMR1Q06787 632 aaKnown RBP eCLIP21.98■■□□□ 1.11
CCDC9-202ENST00000595659 ZBTB38Q8NAP3 1195 aaPredicted RBP21.98■■□□□ 1.11
CCDC9-202ENST00000595659 NSFL1CQ9UNZ2 370 aaKnown RBP21.98■■□□□ 1.11
CCDC9-202ENST00000595659 SALL2Q9Y467 1007 aaPredicted RBP21.98■■□□□ 1.11
CCDC9-202ENST00000595659 SCN4AP35499 1836 aa21.98■■□□□ 1.11
CCDC9-202ENST00000595659 GMPSP49915 693 aaPredicted RBP21.97■■□□□ 1.11
CCDC9-202ENST00000595659 WWC1Q8IX03 1113 aa21.97■■□□□ 1.11
CCDC9-202ENST00000595659 CCDC85AQ96PX6 553 aaPredicted RBP21.97■■□□□ 1.11
CCDC9-202ENST00000595659 RIMBP2O15034 1052 aa21.96■■□□□ 1.11
CCDC9-202ENST00000595659 GPSM2P81274 684 aa21.96■■□□□ 1.11
CCDC9-202ENST00000595659 CIAPIN1Q6FI81 312 aa21.96■■□□□ 1.11
CCDC9-202ENST00000595659 TMC4Q7Z404 712 aa21.96■■□□□ 1.11
CCDC9-202ENST00000595659 SEC31BQ9NQW1 1179 aa21.96■■□□□ 1.11
CCDC9-202ENST00000595659 MAP3K2Q9Y2U5 619 aa21.96■■□□□ 1.11
CCDC9-202ENST00000595659 ZNF316A6NFI3 1004 aaPredicted RBP21.95■■□□□ 1.1
CCDC9-202ENST00000595659 YDJCA8MPS7 323 aa21.95■■□□□ 1.1
CCDC9-202ENST00000595659 C6orf229H3BNL8 230 aa21.95■■□□□ 1.1
CCDC9-202ENST00000595659 ANP32CO43423 234 aa21.95■■□□□ 1.1
CCDC9-202ENST00000595659 RPS8P62241 208 aaKnown RBP21.95■■□□□ 1.1
CCDC9-202ENST00000595659 USP50Q70EL3 339 aaPredicted RBP21.95■■□□□ 1.1
CCDC9-202ENST00000595659 GPR101Q96P66 508 aaPredicted RBP21.95■■□□□ 1.1
CCDC9-202ENST00000595659 METTL22Q9BUU2 404 aaPredicted RBP21.95■■□□□ 1.1
CCDC9-202ENST00000595659 CWC25Q9NXE8 425 aaPredicted RBP21.95■■□□□ 1.1
CCDC9-202ENST00000595659 GPRC5DQ9NZD1 345 aa21.95■■□□□ 1.1
CCDC9-202ENST00000595659 CNTNAP1P78357 1384 aa21.95■■□□□ 1.1
CCDC9-202ENST00000595659 LTBP1Q14766 1721 aa21.94■■□□□ 1.1
CCDC9-202ENST00000595659 DDX58O95786 925 aaKnown RBP21.94■■□□□ 1.1
CCDC9-202ENST00000595659 WASHC4Q2M389 1173 aa21.94■■□□□ 1.1
CCDC9-202ENST00000595659 CCDC191Q8NCU4 936 aa21.94■■□□□ 1.1
CCDC9-202ENST00000595659 BCL2L13Q9BXK5 485 aa21.94■■□□□ 1.1
CCDC9-202ENST00000595659 ADARB2Q9NS39 739 aaKnown RBP21.94■■□□□ 1.1
CCDC9-202ENST00000595659 POLLQ9UGP5 575 aa21.94■■□□□ 1.1
CCDC9-202ENST00000595659 LAMB2P55268 1798 aa21.94■■□□□ 1.1
CCDC9-202ENST00000595659 PCNTO95613 3336 aa21.93■■□□□ 1.1
CCDC9-202ENST00000595659 PI4KAP2A4QPH2 592 aa21.93■■□□□ 1.1
CCDC9-202ENST00000595659 TRAF5O00463 557 aa21.93■■□□□ 1.1
CCDC9-202ENST00000595659 VEGFBP49765 207 aa21.93■■□□□ 1.1
CCDC9-202ENST00000595659 CCDC27Q2M243 656 aa21.93■■□□□ 1.1
CCDC9-202ENST00000595659 G2E3Q7L622 706 aa21.93■■□□□ 1.1
CCDC9-202ENST00000595659 PI4KAP1Q8N8J0 262 aa21.93■■□□□ 1.1
CCDC9-202ENST00000595659 DBNDD1Q9H9R9 158 aa21.93■■□□□ 1.1
CCDC9-202ENST00000595659 COL4A1P02462 1669 aa21.92■■□□□ 1.1
CCDC9-202ENST00000595659 SHTN1A0MZ66 631 aa21.92■■□□□ 1.1
CCDC9-202ENST00000595659 PCCAP05165 728 aaPredicted RBP21.92■■□□□ 1.1
CCDC9-202ENST00000595659 TNIP1Q15025 636 aa21.92■■□□□ 1.1
CCDC9-202ENST00000595659 DOK7Q18PE1 504 aa21.92■■□□□ 1.1
CCDC9-202ENST00000595659 TWISTNBQ3B726 338 aaPredicted RBP21.92■■□□□ 1.1
CCDC9-202ENST00000595659 STK31Q9BXU1 1019 aa21.92■■□□□ 1.1
CCDC9-202ENST00000595659 ABT1Q9ULW3 272 aaKnown RBP21.92■■□□□ 1.1
CCDC9-202ENST00000595659 ZBTB12Q9Y330 459 aaPredicted RBP21.92■■□□□ 1.1
CCDC9-202ENST00000595659 ADAMTSL1Q8N6G6 1762 aa21.92■■□□□ 1.1
CCDC9-202ENST00000595659 KSR2Q6VAB6 950 aa21.91■■□□□ 1.1
CCDC9-202ENST00000595659 CHMP4AQ9BY43 222 aa21.91■■□□□ 1.1
CCDC9-202ENST00000595659 TAF1P21675 1872 aa21.9■■□□□ 1.1
CCDC9-202ENST00000595659 DDX60Q8IY21 1712 aaKnown RBP21.9■■□□□ 1.1
CCDC9-202ENST00000595659 PDE8AO60658 829 aa21.9■■□□□ 1.1
CCDC9-202ENST00000595659 IGKV5-2P06315 115 aa21.9■■□□□ 1.1
CCDC9-202ENST00000595659 TBC1D16Q8TBP0 767 aa21.9■■□□□ 1.1
CCDC9-202ENST00000595659 KCNQ5Q9NR82 932 aa21.9■■□□□ 1.1
CCDC9-202ENST00000595659 SLC4A2P04920 1241 aa21.89■■□□□ 1.09
CCDC9-202ENST00000595659 HSP90B1P14625 803 aaKnown RBP21.89■■□□□ 1.09
CCDC9-202ENST00000595659 CWF19L2Q2TBE0 894 aaKnown RBP21.89■■□□□ 1.09
CCDC9-202ENST00000595659 DEFB115Q30KQ5 88 aa21.89■■□□□ 1.09
CCDC9-202ENST00000595659 CCDC152Q4G0S7 254 aa21.89■■□□□ 1.09
CCDC9-202ENST00000595659 CNOT7Q9UIV1 285 aaKnown RBP21.89■■□□□ 1.09
CCDC9-202ENST00000595659 DUOX1Q9NRD9 1551 aa21.89■■□□□ 1.09
CCDC9-202ENST00000595659 PSMD14O00487 310 aa21.88■■□□□ 1.09
CCDC9-202ENST00000595659 HIRAP54198 1017 aaPredicted RBP21.88■■□□□ 1.09
CCDC9-202ENST00000595659 TRPM4Q8TD43 1214 aa21.88■■□□□ 1.09
CCDC9-202ENST00000595659 ANKIB1Q9P2G1 1089 aa21.88■■□□□ 1.09
CCDC9-202ENST00000595659 ECE2O60344 883 aa21.87■■□□□ 1.09
CCDC9-202ENST00000595659 UFL1O94874 794 aa21.87■■□□□ 1.09
CCDC9-202ENST00000595659 CST9Q5W186 159 aa21.87■■□□□ 1.09
CCDC9-202ENST00000595659 TNS4Q8IZW8 715 aa21.87■■□□□ 1.09
CCDC9-202ENST00000595659 EYA3Q99504 573 aa21.87■■□□□ 1.09
CCDC9-202ENST00000595659 IL16Q14005 1332 aa21.86■■□□□ 1.09
CCDC9-202ENST00000595659 FANCIQ9NVI1 1328 aa21.86■■□□□ 1.09
CCDC9-202ENST00000595659 RASSF10A6NK89 507 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms