RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 SPINK5Q9NQ38 1064 aaPredicted RBP22.15■■□□□ 1.14
IRF3-208ENST00000594387 WDR90Q96KV7 1748 aa22.14■■□□□ 1.14
IRF3-208ENST00000594387 E9PSI1 815 aa22.14■■□□□ 1.13
IRF3-208ENST00000594387 PDE8AO60658 829 aa22.14■■□□□ 1.13
IRF3-208ENST00000594387 DPP8Q6V1X1 898 aaPredicted RBP22.14■■□□□ 1.13
IRF3-208ENST00000594387 LARGE2Q8N3Y3 721 aa22.14■■□□□ 1.13
IRF3-208ENST00000594387 MPNDQ8N594 471 aa22.14■■□□□ 1.13
IRF3-208ENST00000594387 RBM46Q8TBY0 533 aaKnown RBP22.14■■□□□ 1.13
IRF3-208ENST00000594387 SCN4AP35499 1836 aa22.13■■□□□ 1.13
IRF3-208ENST00000594387 EIF6P56537 245 aaKnown RBP22.13■■□□□ 1.13
IRF3-208ENST00000594387 CCDC152Q4G0S7 254 aa22.13■■□□□ 1.13
IRF3-208ENST00000594387 DIEXFQ68CQ4 756 aaKnown RBP22.13■■□□□ 1.13
IRF3-208ENST00000594387 VPS33BQ9H267 617 aa22.13■■□□□ 1.13
IRF3-208ENST00000594387 DNAAF4Q8WXU2 420 aa22.12■■□□□ 1.13
IRF3-208ENST00000594387 ZNF521Q96K83 1311 aa22.11■■□□□ 1.13
IRF3-208ENST00000594387 CDHR2Q9BYE9 1310 aa22.11■■□□□ 1.13
IRF3-208ENST00000594387 IQCA1LA6NCM1 817 aa22.11■■□□□ 1.13
IRF3-208ENST00000594387 DDNO94850 711 aaPredicted RBP22.11■■□□□ 1.13
IRF3-208ENST00000594387 NIM1KQ8IY84 436 aa22.11■■□□□ 1.13
IRF3-208ENST00000594387 PPIP5K2O43314 1243 aa22.1■■□□□ 1.13
IRF3-208ENST00000594387 HSPA6P17066 643 aa22.1■■□□□ 1.13
IRF3-208ENST00000594387 RPS8P62241 208 aaKnown RBP22.1■■□□□ 1.13
IRF3-208ENST00000594387 CWF19L2Q2TBE0 894 aaKnown RBP22.1■■□□□ 1.13
IRF3-208ENST00000594387 JARID2Q92833 1246 aaPredicted RBP22.1■■□□□ 1.13
IRF3-208ENST00000594387 NEURL1BA8MQ27 555 aa22.09■■□□□ 1.13
IRF3-208ENST00000594387 IGKV5-2P06315 115 aa22.09■■□□□ 1.13
IRF3-208ENST00000594387 FSTL1Q12841 308 aa22.09■■□□□ 1.13
IRF3-208ENST00000594387 SMC1BQ8NDV3 1235 aa22.09■■□□□ 1.13
IRF3-208ENST00000594387 LINS1Q8NG48 757 aa22.08■■□□□ 1.13
IRF3-208ENST00000594387 CELF1Q92879 486 aaKnown RBP22.08■■□□□ 1.13
IRF3-208ENST00000594387 NSFL1CQ9UNZ2 370 aaKnown RBP22.08■■□□□ 1.13
IRF3-208ENST00000594387 SNED1Q8TER0 1413 aa22.07■■□□□ 1.12
IRF3-208ENST00000594387 FZD9O00144 591 aa22.07■■□□□ 1.12
IRF3-208ENST00000594387 LRRC37AA6NMS7 1700 aa22.06■■□□□ 1.12
IRF3-208ENST00000594387 SLFN5Q08AF3 891 aa22.06■■□□□ 1.12
IRF3-208ENST00000594387 GCKRQ14397 625 aa22.06■■□□□ 1.12
IRF3-208ENST00000594387 AOC3Q16853 763 aa22.06■■□□□ 1.12
IRF3-208ENST00000594387 UBE3BQ7Z3V4 1068 aa22.06■■□□□ 1.12
IRF3-208ENST00000594387 GPC2Q8N158 579 aa22.06■■□□□ 1.12
IRF3-208ENST00000594387 RTFDC1Q9BY42 306 aaPredicted RBP22.06■■□□□ 1.12
IRF3-208ENST00000594387 ANKRD18AQ8IVF6 992 aa22.05■■□□□ 1.12
IRF3-208ENST00000594387 CCDC85AQ96PX6 553 aaPredicted RBP22.05■■□□□ 1.12
IRF3-208ENST00000594387 CDC5LQ99459 802 aaKnown RBP22.05■■□□□ 1.12
IRF3-208ENST00000594387 EYA3Q99504 573 aa22.05■■□□□ 1.12
IRF3-208ENST00000594387 GJA3Q9Y6H8 435 aa22.05■■□□□ 1.12
IRF3-208ENST00000594387 SPEF2Q9C093 1822 aa22.05■■□□□ 1.12
IRF3-208ENST00000594387 ZNF541Q9H0D2 1346 aa22.05■■□□□ 1.12
IRF3-208ENST00000594387 C6orf229H3BNL8 230 aa22.04■■□□□ 1.12
IRF3-208ENST00000594387 H7C1W4 665 aa22.04■■□□□ 1.12
IRF3-208ENST00000594387 LMOD1P29536 600 aaPredicted RBP22.04■■□□□ 1.12
IRF3-208ENST00000594387 APLP1P51693 650 aa22.04■■□□□ 1.12
IRF3-208ENST00000594387 CTSWP56202 376 aa22.04■■□□□ 1.12
IRF3-208ENST00000594387 L3MBTL3Q96JM7 780 aaPredicted RBP22.04■■□□□ 1.12
IRF3-208ENST00000594387 SEC31BQ9NQW1 1179 aa22.03■■□□□ 1.12
IRF3-208ENST00000594387 ANKIB1Q9P2G1 1089 aa22.03■■□□□ 1.12
IRF3-208ENST00000594387 HACL1Q9UJ83 578 aa22.03■■□□□ 1.12
IRF3-208ENST00000594387 POTECB2RU33 542 aa22.02■■□□□ 1.12
IRF3-208ENST00000594387 F6X3S4 739 aa22.02■■□□□ 1.12
IRF3-208ENST00000594387 G3V3G9 751 aa22.02■■□□□ 1.12
IRF3-208ENST00000594387 WASHC4Q2M389 1173 aa22.02■■□□□ 1.12
IRF3-208ENST00000594387 DCAF8Q5TAQ9 597 aa22.02■■□□□ 1.12
IRF3-208ENST00000594387 SLC4A10Q6U841 1118 aa22.02■■□□□ 1.12
IRF3-208ENST00000594387 ZNRF3Q9ULT6 936 aa22.02■■□□□ 1.12
IRF3-208ENST00000594387 KIAA2012Q0VF49 1180 aa22.01■■□□□ 1.11
IRF3-208ENST00000594387 MIER1Q8N108 512 aa22.01■■□□□ 1.11
IRF3-208ENST00000594387 TTLL11Q8NHH1 800 aa22.01■■□□□ 1.11
IRF3-208ENST00000594387 GPSM2P81274 684 aa22■■□□□ 1.11
IRF3-208ENST00000594387 SLC51AQ86UW1 340 aa22■■□□□ 1.11
IRF3-208ENST00000594387 PNMA8AQ86V59 439 aaPredicted RBP22■■□□□ 1.11
IRF3-208ENST00000594387 C9orf78Q9NZ63 289 aaPredicted RBP22■■□□□ 1.11
IRF3-208ENST00000594387 IGHMBP2P38935 993 aaKnown RBP21.99■■□□□ 1.11
IRF3-208ENST00000594387 TNIP1Q15025 636 aa21.99■■□□□ 1.11
IRF3-208ENST00000594387 EAPPQ56P03 285 aaPredicted RBP21.99■■□□□ 1.11
IRF3-208ENST00000594387 BEND3Q5T5X7 828 aa21.99■■□□□ 1.11
IRF3-208ENST00000594387 CDCA7LQ96GN5 454 aa21.99■■□□□ 1.11
IRF3-208ENST00000594387 PLA2G12BQ9BX93 195 aa21.99■■□□□ 1.11
IRF3-208ENST00000594387 ZC3H12CQ9C0D7 883 aaKnown RBP21.99■■□□□ 1.11
IRF3-208ENST00000594387 SRCIN1Q9C0H9 1055 aa21.99■■□□□ 1.11
IRF3-208ENST00000594387 TAF1DQ9H5J8 278 aaPredicted RBP21.99■■□□□ 1.11
IRF3-208ENST00000594387 CLEC11AQ9Y240 323 aa21.99■■□□□ 1.11
IRF3-208ENST00000594387 RIMBP2O15034 1052 aa21.98■■□□□ 1.11
IRF3-208ENST00000594387 ALDH1L1O75891 902 aa21.98■■□□□ 1.11
IRF3-208ENST00000594387 EPHX2P34913 555 aa21.98■■□□□ 1.11
IRF3-208ENST00000594387 CHADLQ6NUI6 762 aa21.98■■□□□ 1.11
IRF3-208ENST00000594387 GGA1Q9UJY5 639 aa21.98■■□□□ 1.11
IRF3-208ENST00000594387 CT47B1P0C2W7 299 aaPredicted RBP21.97■■□□□ 1.11
IRF3-208ENST00000594387 ALDH1L2Q3SY69 923 aa21.97■■□□□ 1.11
IRF3-208ENST00000594387 CIAPIN1Q6FI81 312 aa21.97■■□□□ 1.11
IRF3-208ENST00000594387 MRPL50Q8N5N7 158 aaKnown RBP21.97■■□□□ 1.11
IRF3-208ENST00000594387 MPHOSPH8Q99549 860 aa21.97■■□□□ 1.11
IRF3-208ENST00000594387 GREM2Q9H772 168 aa21.97■■□□□ 1.11
IRF3-208ENST00000594387 PTPRCP08575 1304 aa21.97■■□□□ 1.11
IRF3-208ENST00000594387 COL4A5P29400 1685 aa21.96■■□□□ 1.11
IRF3-208ENST00000594387 LDHDQ86WU2 507 aa21.96■■□□□ 1.11
IRF3-208ENST00000594387 TBC1D16Q8TBP0 767 aa21.96■■□□□ 1.11
IRF3-208ENST00000594387 BCL2L13Q9BXK5 485 aa21.96■■□□□ 1.11
IRF3-208ENST00000594387 PODXL2Q9NZ53 605 aa21.96■■□□□ 1.11
IRF3-208ENST00000594387 POLLQ9UGP5 575 aa21.96■■□□□ 1.11
IRF3-208ENST00000594387 CHMP3Q9Y3E7 222 aa21.96■■□□□ 1.11
IRF3-208ENST00000594387 RTL9Q8NET4 1388 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms