RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 PPP1R1BQ9UD71 204 aaPredicted RBP18.18■□□□□ 0.5
CAPN12-202ENST00000593700 AMIGO3Q86WK7 504 aa18.17■□□□□ 0.5
CAPN12-202ENST00000593700 SPDYE1Q8NFV5 336 aaPredicted RBP18.17■□□□□ 0.5
CAPN12-202ENST00000593700 TRMT112Q9UI30 125 aaKnown RBP18.17■□□□□ 0.5
CAPN12-202ENST00000593700 SH3TC1Q8TE82 1336 aa18.17■□□□□ 0.5
CAPN12-202ENST00000593700 PNMA6EA0A0J9YXQ4 647 aa18.16■□□□□ 0.5
CAPN12-202ENST00000593700 GYS1P13807 737 aa18.16■□□□□ 0.5
CAPN12-202ENST00000593700 CASP7P55210 303 aa18.16■□□□□ 0.5
CAPN12-202ENST00000593700 RABL6Q3YEC7 729 aaPredicted RBP18.16■□□□□ 0.5
CAPN12-202ENST00000593700 USPL1Q5W0Q7 1092 aa18.16■□□□□ 0.5
CAPN12-202ENST00000593700 SGIP1Q9BQI5 828 aa18.16■□□□□ 0.5
CAPN12-202ENST00000593700 UTP14AQ9BVJ6 771 aaKnown RBP18.16■□□□□ 0.5
CAPN12-202ENST00000593700 NYXQ9GZU5 481 aa18.16■□□□□ 0.5
CAPN12-202ENST00000593700 PDZRN3Q9UPQ7 1066 aa18.16■□□□□ 0.5
CAPN12-202ENST00000593700 UBN2Q6ZU65 1347 aa18.16■□□□□ 0.5
CAPN12-202ENST00000593700 SPEF2Q9C093 1822 aa18.15■□□□□ 0.5
CAPN12-202ENST00000593700 PTGER2P43116 358 aa18.15■□□□□ 0.5
CAPN12-202ENST00000593700 PLA2G12BQ9BX93 195 aa18.15■□□□□ 0.5
CAPN12-202ENST00000593700 CLEC11AQ9Y240 323 aa18.15■□□□□ 0.5
CAPN12-202ENST00000593700 CARMIL3Q8ND23 1372 aa18.15■□□□□ 0.5
CAPN12-202ENST00000593700 RAB11FIP3O75154 756 aa18.14■□□□□ 0.49
CAPN12-202ENST00000593700 NUCB1Q02818 461 aa18.14■□□□□ 0.49
CAPN12-202ENST00000593700 ERC1Q8IUD2 1116 aa18.14■□□□□ 0.49
CAPN12-202ENST00000593700 SETDB2Q96T68 719 aa18.14■□□□□ 0.49
CAPN12-202ENST00000593700 OS9Q13438 667 aaPredicted RBP18.13■□□□□ 0.49
CAPN12-202ENST00000593700 GSE1Q14687 1217 aa18.13■□□□□ 0.49
CAPN12-202ENST00000593700 RTL5Q5HYW3 569 aaPredicted RBP18.13■□□□□ 0.49
CAPN12-202ENST00000593700 ANKRD45Q5TZF3 282 aa18.13■□□□□ 0.49
CAPN12-202ENST00000593700 CHD1LQ86WJ1 897 aa18.13■□□□□ 0.49
CAPN12-202ENST00000593700 CHMP3Q9Y3E7 222 aa18.13■□□□□ 0.49
CAPN12-202ENST00000593700 AK9Q5TCS8 1911 aa18.12■□□□□ 0.49
CAPN12-202ENST00000593700 IRS4O14654 1257 aaPredicted RBP18.12■□□□□ 0.49
CAPN12-202ENST00000593700 PDE8AO60658 829 aa18.12■□□□□ 0.49
CAPN12-202ENST00000593700 SURF6O75683 361 aaKnown RBP18.12■□□□□ 0.49
CAPN12-202ENST00000593700 FAM89AQ96GI7 184 aa18.12■□□□□ 0.49
CAPN12-202ENST00000593700 KAZALD1Q96I82 304 aa18.12■□□□□ 0.49
CAPN12-202ENST00000593700 LRRCC1Q9C099 1032 aa18.12■□□□□ 0.49
CAPN12-202ENST00000593700 SRP68Q9UHB9 627 aaKnown RBP18.12■□□□□ 0.49
CAPN12-202ENST00000593700 PARP3Q9Y6F1 533 aa18.12■□□□□ 0.49
CAPN12-202ENST00000593700 NPHP1O15259 732 aa18.11■□□□□ 0.49
CAPN12-202ENST00000593700 NTSR2O95665 410 aa18.11■□□□□ 0.49
CAPN12-202ENST00000593700 GTF2E1P29083 439 aaPredicted RBP18.11■□□□□ 0.49
CAPN12-202ENST00000593700 RGS3P49796 1198 aa18.11■□□□□ 0.49
CAPN12-202ENST00000593700 SUSD4Q5VX71 490 aa18.11■□□□□ 0.49
CAPN12-202ENST00000593700 MSL1Q68DK7 614 aa18.11■□□□□ 0.49
CAPN12-202ENST00000593700 LMBR1LQ6UX01 489 aa18.11■□□□□ 0.49
CAPN12-202ENST00000593700 JARID2Q92833 1246 aaPredicted RBP18.11■□□□□ 0.49
CAPN12-202ENST00000593700 EXOC6BQ9Y2D4 811 aa18.11■□□□□ 0.49
CAPN12-202ENST00000593700 CTSWP56202 376 aa18.1■□□□□ 0.49
CAPN12-202ENST00000593700 FOXO4P98177 505 aa18.1■□□□□ 0.49
CAPN12-202ENST00000593700 TBC1D9BQ66K14 1250 aa18.1■□□□□ 0.49
CAPN12-202ENST00000593700 SMIM5Q71RC9 77 aa18.1■□□□□ 0.49
CAPN12-202ENST00000593700 KIF1BPQ96EK5 621 aa18.1■□□□□ 0.49
CAPN12-202ENST00000593700 LNPKQ9C0E8 428 aa18.1■□□□□ 0.49
CAPN12-202ENST00000593700 BCL2L12Q9HB09 334 aa18.1■□□□□ 0.49
CAPN12-202ENST00000593700 MMP10P09238 476 aa18.09■□□□□ 0.49
CAPN12-202ENST00000593700 G3BP1Q13283 466 aaKnown RBP eCLIP18.09■□□□□ 0.49
CAPN12-202ENST00000593700 CCDC57Q2TAC2 916 aa18.09■□□□□ 0.49
CAPN12-202ENST00000593700 EPHA10Q5JZY3 1008 aa18.09■□□□□ 0.49
CAPN12-202ENST00000593700 BICDL1Q6ZP65 573 aa18.09■□□□□ 0.49
CAPN12-202ENST00000593700 NBPF5PQ86XG9 351 aaPredicted RBP18.09■□□□□ 0.49
CAPN12-202ENST00000593700 NOP58Q9Y2X3 529 aaKnown RBP18.09■□□□□ 0.49
CAPN12-202ENST00000593700 NRXN2Q9P2S2 1712 aa18.09■□□□□ 0.49
CAPN12-202ENST00000593700 RIC1Q4ADV7 1423 aa18.08■□□□□ 0.49
CAPN12-202ENST00000593700 FAM177BA6PVY3 158 aa18.08■□□□□ 0.48
CAPN12-202ENST00000593700 TAF7LQ5H9L4 462 aa18.08■□□□□ 0.48
CAPN12-202ENST00000593700 TPTE2Q6XPS3 522 aa18.08■□□□□ 0.48
CAPN12-202ENST00000593700 COPRSQ9NQ92 184 aa18.08■□□□□ 0.48
CAPN12-202ENST00000593700 APBB1O00213 710 aa18.07■□□□□ 0.48
CAPN12-202ENST00000593700 TM4SF1P30408 202 aa18.07■□□□□ 0.48
CAPN12-202ENST00000593700 NUBP1P53384 320 aa18.07■□□□□ 0.48
CAPN12-202ENST00000593700 IFIT5Q13325 482 aaKnown RBP18.07■□□□□ 0.48
CAPN12-202ENST00000593700 CCDC152Q4G0S7 254 aa18.07■□□□□ 0.48
CAPN12-202ENST00000593700 CD2APQ9Y5K6 639 aa18.07■□□□□ 0.48
CAPN12-202ENST00000593700 RTL9Q8NET4 1388 aa18.06■□□□□ 0.48
CAPN12-202ENST00000593700 ANKRD18BA2A2Z9 1011 aa18.06■□□□□ 0.48
CAPN12-202ENST00000593700 DCAF8Q5TAQ9 597 aa18.06■□□□□ 0.48
CAPN12-202ENST00000593700 RNF25Q96BH1 459 aaPredicted RBP18.06■□□□□ 0.48
CAPN12-202ENST00000593700 TSHZ2Q9NRE2 1034 aa18.06■□□□□ 0.48
CAPN12-202ENST00000593700 A0A1B0GUL6 1792 aa18.06■□□□□ 0.48
CAPN12-202ENST00000593700 TNRC6CQ9HCJ0 1690 aaKnown RBP18.06■□□□□ 0.48
CAPN12-202ENST00000593700 CSF1RP07333 972 aa18.05■□□□□ 0.48
CAPN12-202ENST00000593700 NFIXQ14938 502 aa18.05■□□□□ 0.48
CAPN12-202ENST00000593700 FAM161AQ3B820 660 aa18.05■□□□□ 0.48
CAPN12-202ENST00000593700 CNBD1Q8NA66 436 aa18.05■□□□□ 0.48
CAPN12-202ENST00000593700 RHPN1Q8TCX5 695 aa18.05■□□□□ 0.48
CAPN12-202ENST00000593700 POLRMTO00411 1230 aaKnown RBP18.04■□□□□ 0.48
CAPN12-202ENST00000593700 PRR29P0C7W0 189 aa18.04■□□□□ 0.48
CAPN12-202ENST00000593700 ST5P78524 1137 aa18.04■□□□□ 0.48
CAPN12-202ENST00000593700 HS6ST3Q8IZP7 471 aa18.04■□□□□ 0.48
CAPN12-202ENST00000593700 CLASRPQ8N2M8 674 aaKnown RBP18.04■□□□□ 0.48
CAPN12-202ENST00000593700 PA2G4Q9UQ80 394 aaKnown RBP18.04■□□□□ 0.48
CAPN12-202ENST00000593700 ARAP2Q8WZ64 1704 aa18.03■□□□□ 0.48
CAPN12-202ENST00000593700 CIAO1O76071 339 aa18.03■□□□□ 0.48
CAPN12-202ENST00000593700 RFX5P48382 616 aaPredicted RBP18.03■□□□□ 0.48
CAPN12-202ENST00000593700 PTPN12Q05209 780 aaKnown RBP18.03■□□□□ 0.48
CAPN12-202ENST00000593700 NUTM1Q86Y26 1132 aa18.03■□□□□ 0.48
CAPN12-202ENST00000593700 TTLL11Q8NHH1 800 aa18.03■□□□□ 0.48
CAPN12-202ENST00000593700 GPATCH3Q96I76 525 aa18.03■□□□□ 0.48
CAPN12-202ENST00000593700 SIL1Q9H173 461 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms