RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 HDGFL1Q5TGJ6 251 aa13.95□□□□□ -0.18
USE1-203ENST00000593597 CST9Q5W186 159 aa13.95□□□□□ -0.18
USE1-203ENST00000593597 SP8Q8IXZ3 490 aa13.95□□□□□ -0.18
USE1-203ENST00000593597 GRAPLQ8TC17 118 aaPredicted RBP13.95□□□□□ -0.18
USE1-203ENST00000593597 MBIPQ9NS73 344 aa13.95□□□□□ -0.18
USE1-203ENST00000593597 WBP1LQ9NX94 342 aa13.95□□□□□ -0.18
USE1-203ENST00000593597 GPRC5DQ9NZD1 345 aa13.95□□□□□ -0.18
USE1-203ENST00000593597 TRMT112Q9UI30 125 aaKnown RBP13.95□□□□□ -0.18
USE1-203ENST00000593597 ATP5J2-PTCD1G3V325 749 aa13.94□□□□□ -0.18
USE1-203ENST00000593597 LMOD1P29536 600 aaPredicted RBP13.94□□□□□ -0.18
USE1-203ENST00000593597 GMPSP49915 693 aaPredicted RBP13.94□□□□□ -0.18
USE1-203ENST00000593597 KIAA2012Q0VF49 1180 aa13.94□□□□□ -0.18
USE1-203ENST00000593597 PLBD2Q8NHP8 589 aa13.94□□□□□ -0.18
USE1-203ENST00000593597 CELF1Q92879 486 aaKnown RBP13.94□□□□□ -0.18
USE1-203ENST00000593597 ZNRF3Q9ULT6 936 aa13.94□□□□□ -0.18
USE1-203ENST00000593597 BBOX1O75936 387 aa13.93□□□□□ -0.18
USE1-203ENST00000593597 HOXB7P09629 217 aa13.93□□□□□ -0.18
USE1-203ENST00000593597 HIRAP54198 1017 aaPredicted RBP13.93□□□□□ -0.18
USE1-203ENST00000593597 DEFB115Q30KQ5 88 aa13.93□□□□□ -0.18
USE1-203ENST00000593597 DPP8Q6V1X1 898 aaPredicted RBP13.93□□□□□ -0.18
USE1-203ENST00000593597 USP50Q70EL3 339 aaPredicted RBP13.93□□□□□ -0.18
USE1-203ENST00000593597 MPNDQ8N594 471 aa13.93□□□□□ -0.18
USE1-203ENST00000593597 FAM89AQ96GI7 184 aa13.93□□□□□ -0.18
USE1-203ENST00000593597 CFAP44Q96MT7 982 aa13.93□□□□□ -0.18
USE1-203ENST00000593597 VPS33BQ9H267 617 aa13.93□□□□□ -0.18
USE1-203ENST00000593597 PRKRIP1Q9H875 184 aaPredicted RBP13.93□□□□□ -0.18
USE1-203ENST00000593597 MYH3P11055 1940 aa13.93□□□□□ -0.18
USE1-203ENST00000593597 WDR33Q9C0J8 1336 aaKnown RBP13.92□□□□□ -0.18
USE1-203ENST00000593597 RAD17O75943 681 aa13.92□□□□□ -0.18
USE1-203ENST00000593597 WDR43Q15061 677 aaKnown RBP eCLIP13.92□□□□□ -0.18
USE1-203ENST00000593597 DUSP27Q5VZP5 1158 aa13.92□□□□□ -0.18
USE1-203ENST00000593597 DDX46Q7L014 1031 aaKnown RBP13.92□□□□□ -0.18
USE1-203ENST00000593597 TRPM4Q8TD43 1214 aa13.92□□□□□ -0.18
USE1-203ENST00000593597 ADARB2Q9NS39 739 aaKnown RBP13.92□□□□□ -0.18
USE1-203ENST00000593597 HSPA8P11142 646 aaKnown RBP13.91□□□□□ -0.18
USE1-203ENST00000593597 SF3B3Q15393 1217 aaKnown RBP13.91□□□□□ -0.18
USE1-203ENST00000593597 RTL5Q5HYW3 569 aaPredicted RBP13.91□□□□□ -0.18
USE1-203ENST00000593597 ANKRD13DQ6ZTN6 518 aa13.91□□□□□ -0.18
USE1-203ENST00000593597 SUPT20HQ8NEM7 779 aa13.91□□□□□ -0.18
USE1-203ENST00000593597 PHAXQ9H814 394 aaKnown RBP13.91□□□□□ -0.18
USE1-203ENST00000593597 PRDM10Q9NQV6 1147 aa13.91□□□□□ -0.18
USE1-203ENST00000593597 DBF4Q9UBU7 674 aaPredicted RBP13.91□□□□□ -0.18
USE1-203ENST00000593597 ABT1Q9ULW3 272 aaKnown RBP13.91□□□□□ -0.18
USE1-203ENST00000593597 LBX1P52954 281 aa13.9□□□□□ -0.18
USE1-203ENST00000593597 CIAPIN1Q6FI81 312 aa13.9□□□□□ -0.18
USE1-203ENST00000593597 CYP4F22Q6NT55 531 aa13.9□□□□□ -0.18
USE1-203ENST00000593597 DLK2Q6UY11 383 aa13.9□□□□□ -0.18
USE1-203ENST00000593597 GPR101Q96P66 508 aaPredicted RBP13.9□□□□□ -0.18
USE1-203ENST00000593597 GLIS2Q9BZE0 524 aaPredicted RBP13.9□□□□□ -0.18
USE1-203ENST00000593597 PGAP2Q9UHJ9 254 aa13.9□□□□□ -0.18
USE1-203ENST00000593597 RTL9Q8NET4 1388 aa13.9□□□□□ -0.18
USE1-203ENST00000593597 CDHR2Q9BYE9 1310 aa13.9□□□□□ -0.19
USE1-203ENST00000593597 APAF1O14727 1248 aa13.89□□□□□ -0.19
USE1-203ENST00000593597 EGFRP00533 1210 aa13.89□□□□□ -0.19
USE1-203ENST00000593597 CTCFP49711 727 aaPredicted RBP13.89□□□□□ -0.19
USE1-203ENST00000593597 GPSM2P81274 684 aa13.89□□□□□ -0.19
USE1-203ENST00000593597 KCNQ5Q9NR82 932 aa13.89□□□□□ -0.19
USE1-203ENST00000593597 POLLQ9UGP5 575 aa13.89□□□□□ -0.19
USE1-203ENST00000593597 ZBTB12Q9Y330 459 aaPredicted RBP13.89□□□□□ -0.19
USE1-203ENST00000593597 TLL2Q9Y6L7 1015 aa13.89□□□□□ -0.19
USE1-203ENST00000593597 TRIM28Q13263 835 aaKnown RBP13.88□□□□□ -0.19
USE1-203ENST00000593597 CCDC184Q52MB2 194 aa13.88□□□□□ -0.19
USE1-203ENST00000593597 C8orf58Q8NAV2 365 aa13.88□□□□□ -0.19
USE1-203ENST00000593597 CAPNS2Q96L46 248 aa13.88□□□□□ -0.19
USE1-203ENST00000593597 DBNDD1Q9H9R9 158 aa13.88□□□□□ -0.19
USE1-203ENST00000593597 HYPKQ9NX55 129 aa13.88□□□□□ -0.19
USE1-203ENST00000593597 A0A1B0GUL6 1792 aa13.87□□□□□ -0.19
USE1-203ENST00000593597 ELL2O00472 640 aaPredicted RBP13.87□□□□□ -0.19
USE1-203ENST00000593597 PSMD14O00487 310 aa13.87□□□□□ -0.19
USE1-203ENST00000593597 IRS4O14654 1257 aaPredicted RBP13.87□□□□□ -0.19
USE1-203ENST00000593597 AOC2O75106 756 aa13.87□□□□□ -0.19
USE1-203ENST00000593597 SEC31BQ9NQW1 1179 aa13.87□□□□□ -0.19
USE1-203ENST00000593597 IFT57Q9NWB7 429 aa13.87□□□□□ -0.19
USE1-203ENST00000593597 CASP8AP2Q9UKL3 1982 aa13.86□□□□□ -0.19
USE1-203ENST00000593597 TMC4Q7Z404 712 aa13.86□□□□□ -0.19
USE1-203ENST00000593597 SAPCD2Q86UD0 394 aa13.86□□□□□ -0.19
USE1-203ENST00000593597 MICALL2Q8IY33 904 aa13.86□□□□□ -0.19
USE1-203ENST00000593597 TSPYL6Q8N831 410 aa13.86□□□□□ -0.19
USE1-203ENST00000593597 JARID2Q92833 1246 aaPredicted RBP13.86□□□□□ -0.19
USE1-203ENST00000593597 AIDAQ96BJ3 306 aa13.86□□□□□ -0.19
USE1-203ENST00000593597 TMX4Q9H1E5 349 aaPredicted RBP13.86□□□□□ -0.19
USE1-203ENST00000593597 CNOT7Q9UIV1 285 aaKnown RBP13.86□□□□□ -0.19
USE1-203ENST00000593597 NSFL1CQ9UNZ2 370 aaKnown RBP13.86□□□□□ -0.19
USE1-203ENST00000593597 RIMBP2O15034 1052 aa13.85□□□□□ -0.19
USE1-203ENST00000593597 CELF2O95319 508 aaKnown RBP13.85□□□□□ -0.19
USE1-203ENST00000593597 TNIP1Q15025 636 aa13.85□□□□□ -0.19
USE1-203ENST00000593597 WASHC4Q2M389 1173 aa13.85□□□□□ -0.19
USE1-203ENST00000593597 SAMD7Q7Z3H4 446 aa13.85□□□□□ -0.19
USE1-203ENST00000593597 ZBTB38Q8NAP3 1195 aaPredicted RBP13.85□□□□□ -0.19
USE1-203ENST00000593597 TBC1D16Q8TBP0 767 aa13.85□□□□□ -0.19
USE1-203ENST00000593597 MYD88Q99836 296 aa13.85□□□□□ -0.19
USE1-203ENST00000593597 BCL2L13Q9BXK5 485 aa13.85□□□□□ -0.19
USE1-203ENST00000593597 ECE2O60344 883 aa13.84□□□□□ -0.19
USE1-203ENST00000593597 GRM1Q13255 1194 aa13.84□□□□□ -0.19
USE1-203ENST00000593597 DOK7Q18PE1 504 aa13.84□□□□□ -0.19
USE1-203ENST00000593597 TSKSQ9UJT2 592 aa13.84□□□□□ -0.19
USE1-203ENST00000593597 WTIPA6NIX2 430 aaPredicted RBP13.83□□□□□ -0.2
USE1-203ENST00000593597 PCCAP05165 728 aaPredicted RBP13.83□□□□□ -0.2
USE1-203ENST00000593597 RPS8P62241 208 aaKnown RBP13.83□□□□□ -0.2
USE1-203ENST00000593597 GNAI1P63096 354 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms