RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 PASKQ96RG2 1323 aa23.22■■□□□ 1.31
CIRBP-243ENST00000593128 ADAMTSL1Q8N6G6 1762 aa23.22■■□□□ 1.31
CIRBP-243ENST00000593128 TMEM88BA6NKF7 163 aa23.21■■□□□ 1.31
CIRBP-243ENST00000593128 ZNF853P0CG23 659 aa23.21■■□□□ 1.31
CIRBP-243ENST00000593128 EPS15P42566 896 aa23.21■■□□□ 1.31
CIRBP-243ENST00000593128 COL13A1Q5TAT6 717 aaPredicted RBP23.21■■□□□ 1.31
CIRBP-243ENST00000593128 ISCA1Q9BUE6 129 aa23.21■■□□□ 1.31
CIRBP-243ENST00000593128 PHAXQ9H814 394 aaKnown RBP23.21■■□□□ 1.31
CIRBP-243ENST00000593128 ITGBL1O95965 494 aaPredicted RBP23.2■■□□□ 1.3
CIRBP-243ENST00000593128 SCNN1DP51172 638 aa23.2■■□□□ 1.3
CIRBP-243ENST00000593128 CCDC184Q52MB2 194 aa23.19■■□□□ 1.3
CIRBP-243ENST00000593128 C8orf58Q8NAV2 365 aa23.19■■□□□ 1.3
CIRBP-243ENST00000593128 ZNRF3Q9ULT6 936 aa23.19■■□□□ 1.3
CIRBP-243ENST00000593128 MYD88Q99836 296 aa23.18■■□□□ 1.3
CIRBP-243ENST00000593128 CNTNAP1P78357 1384 aa23.17■■□□□ 1.3
CIRBP-243ENST00000593128 IRS4O14654 1257 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-243ENST00000593128 RAD17O75943 681 aa23.17■■□□□ 1.3
CIRBP-243ENST00000593128 CXCL9Q07325 125 aa23.17■■□□□ 1.3
CIRBP-243ENST00000593128 RTFDC1Q9BY42 306 aaPredicted RBP23.17■■□□□ 1.3
CIRBP-243ENST00000593128 VPS33BQ9H267 617 aa23.17■■□□□ 1.3
CIRBP-243ENST00000593128 CELF1Q92879 486 aaKnown RBP23.16■■□□□ 1.3
CIRBP-243ENST00000593128 ABT1Q9ULW3 272 aaKnown RBP23.16■■□□□ 1.3
CIRBP-243ENST00000593128 NSFL1CQ9UNZ2 370 aaKnown RBP23.16■■□□□ 1.3
CIRBP-243ENST00000593128 GMPSP49915 693 aaPredicted RBP23.15■■□□□ 1.3
CIRBP-243ENST00000593128 KIAA2012Q0VF49 1180 aa23.15■■□□□ 1.3
CIRBP-243ENST00000593128 CIAPIN1Q6FI81 312 aa23.15■■□□□ 1.3
CIRBP-243ENST00000593128 TSR2Q969E8 191 aaKnown RBP23.15■■□□□ 1.3
CIRBP-243ENST00000593128 BCL2L13Q9BXK5 485 aa23.15■■□□□ 1.3
CIRBP-243ENST00000593128 C6orf229H3BNL8 230 aa23.14■■□□□ 1.29
CIRBP-243ENST00000593128 RIMBP2O15034 1052 aa23.14■■□□□ 1.29
CIRBP-243ENST00000593128 SF3B3Q15393 1217 aaKnown RBP23.14■■□□□ 1.29
CIRBP-243ENST00000593128 CCDC30Q5VVM6 783 aa23.14■■□□□ 1.29
CIRBP-243ENST00000593128 USP50Q70EL3 339 aaPredicted RBP23.14■■□□□ 1.29
CIRBP-243ENST00000593128 TMC4Q7Z404 712 aa23.14■■□□□ 1.29
CIRBP-243ENST00000593128 TNS4Q8IZW8 715 aa23.14■■□□□ 1.29
CIRBP-243ENST00000593128 JARID2Q92833 1246 aaPredicted RBP23.14■■□□□ 1.29
CIRBP-243ENST00000593128 GPRC5DQ9NZD1 345 aa23.14■■□□□ 1.29
CIRBP-243ENST00000593128 LRRC37AA6NMS7 1700 aa23.13■■□□□ 1.29
CIRBP-243ENST00000593128 CAPN15O75808 1086 aa23.13■■□□□ 1.29
CIRBP-243ENST00000593128 VEGFBP49765 207 aa23.13■■□□□ 1.29
CIRBP-243ENST00000593128 FMR1Q06787 632 aaKnown RBP eCLIP23.13■■□□□ 1.29
CIRBP-243ENST00000593128 CCDC85AQ96PX6 553 aaPredicted RBP23.13■■□□□ 1.29
CIRBP-243ENST00000593128 ADARB2Q9NS39 739 aaKnown RBP23.13■■□□□ 1.29
CIRBP-243ENST00000593128 COL4A1P02462 1669 aa23.13■■□□□ 1.29
CIRBP-243ENST00000593128 DDX58O95786 925 aaKnown RBP23.12■■□□□ 1.29
CIRBP-243ENST00000593128 TNIP1Q15025 636 aa23.12■■□□□ 1.29
CIRBP-243ENST00000593128 PAXIP1Q6ZW49 1069 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-243ENST00000593128 TSPYL6Q8N831 410 aa23.12■■□□□ 1.29
CIRBP-243ENST00000593128 ZBTB38Q8NAP3 1195 aaPredicted RBP23.12■■□□□ 1.29
CIRBP-243ENST00000593128 DUOX1Q9NRD9 1551 aa23.12■■□□□ 1.29
CIRBP-243ENST00000593128 GPSM2P81274 684 aa23.11■■□□□ 1.29
CIRBP-243ENST00000593128 TRIM28Q13263 835 aaKnown RBP23.11■■□□□ 1.29
CIRBP-243ENST00000593128 WASHC4Q2M389 1173 aa23.11■■□□□ 1.29
CIRBP-243ENST00000593128 TRAF5O00463 557 aa23.1■■□□□ 1.29
CIRBP-243ENST00000593128 GRM1Q13255 1194 aa23.1■■□□□ 1.29
CIRBP-243ENST00000593128 DEFB115Q30KQ5 88 aa23.1■■□□□ 1.29
CIRBP-243ENST00000593128 GPR101Q96P66 508 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-243ENST00000593128 DBNDD1Q9H9R9 158 aa23.1■■□□□ 1.29
CIRBP-243ENST00000593128 MRS2Q9HD23 443 aa23.1■■□□□ 1.29
CIRBP-243ENST00000593128 CWC25Q9NXE8 425 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-243ENST00000593128 SALL2Q9Y467 1007 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-243ENST00000593128 YDJCA8MPS7 323 aa23.09■■□□□ 1.29
CIRBP-243ENST00000593128 AIDAQ96BJ3 306 aa23.09■■□□□ 1.29
CIRBP-243ENST00000593128 STK31Q9BXU1 1019 aa23.09■■□□□ 1.29
CIRBP-243ENST00000593128 CHMP4AQ9BY43 222 aa23.09■■□□□ 1.29
CIRBP-243ENST00000593128 SEC31BQ9NQW1 1179 aa23.09■■□□□ 1.29
CIRBP-243ENST00000593128 MAP3K2Q9Y2U5 619 aa23.09■■□□□ 1.29
CIRBP-243ENST00000593128 HSP90B1P14625 803 aaKnown RBP23.08■■□□□ 1.29
CIRBP-243ENST00000593128 RPS8P62241 208 aaKnown RBP23.08■■□□□ 1.29
CIRBP-243ENST00000593128 DOK7Q18PE1 504 aa23.08■■□□□ 1.29
CIRBP-243ENST00000593128 CCDC191Q8NCU4 936 aa23.08■■□□□ 1.29
CIRBP-243ENST00000593128 METTL22Q9BUU2 404 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-243ENST00000593128 TRPM7Q96QT4 1865 aa23.07■■□□□ 1.28
CIRBP-243ENST00000593128 ZEB1P37275 1124 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-243ENST00000593128 POLLQ9UGP5 575 aa23.07■■□□□ 1.28
CIRBP-243ENST00000593128 ZBTB12Q9Y330 459 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-243ENST00000593128 SHTN1A0MZ66 631 aa23.06■■□□□ 1.28
CIRBP-243ENST00000593128 G3V3G9 751 aa23.06■■□□□ 1.28
CIRBP-243ENST00000593128 FOXN1O15353 648 aa23.06■■□□□ 1.28
CIRBP-243ENST00000593128 ANP32CO43423 234 aa23.06■■□□□ 1.28
CIRBP-243ENST00000593128 PCCAP05165 728 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-243ENST00000593128 CCDC152Q4G0S7 254 aa23.06■■□□□ 1.28
CIRBP-243ENST00000593128 DCAF8Q5TAQ9 597 aa23.06■■□□□ 1.28
CIRBP-243ENST00000593128 WWC1Q8IX03 1113 aa23.06■■□□□ 1.28
CIRBP-243ENST00000593128 EYA3Q99504 573 aa23.06■■□□□ 1.28
CIRBP-243ENST00000593128 ANKIB1Q9P2G1 1089 aa23.06■■□□□ 1.28
CIRBP-243ENST00000593128 CNOT7Q9UIV1 285 aaKnown RBP23.06■■□□□ 1.28
CIRBP-243ENST00000593128 PI4KAP2A4QPH2 592 aa23.05■■□□□ 1.28
CIRBP-243ENST00000593128 RASSF10A6NK89 507 aa23.05■■□□□ 1.28
CIRBP-243ENST00000593128 PDE8AO60658 829 aa23.05■■□□□ 1.28
CIRBP-243ENST00000593128 TWISTNBQ3B726 338 aaPredicted RBP23.05■■□□□ 1.28
CIRBP-243ENST00000593128 PI4KAP1Q8N8J0 262 aa23.05■■□□□ 1.28
CIRBP-243ENST00000593128 ZNF408Q9H9D4 720 aa23.05■■□□□ 1.28
CIRBP-243ENST00000593128 H7C1D1 291 aa23.04■■□□□ 1.28
CIRBP-243ENST00000593128 PSMD14O00487 310 aa23.04■■□□□ 1.28
CIRBP-243ENST00000593128 ECE2O60344 883 aa23.04■■□□□ 1.28
CIRBP-243ENST00000593128 NEXNQ0ZGT2 675 aa23.04■■□□□ 1.28
CIRBP-243ENST00000593128 MICALL2Q8IY33 904 aa23.04■■□□□ 1.28
CIRBP-243ENST00000593128 TBC1D16Q8TBP0 767 aa23.04■■□□□ 1.28
CIRBP-243ENST00000593128 TRPM4Q8TD43 1214 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 680 ms