RNA–Protein interactions for RNA: ENST00000592860.2

CFD-202, Transcript of complement factor D, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CFD, Length 809 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFD-202ENST00000592860 SF3B3Q15393 1217 aaKnown RBP29.81■■■□□ 2.36
CFD-202ENST00000592860 MPNDQ8N594 471 aa29.81■■■□□ 2.36
CFD-202ENST00000592860 MYD88Q99836 296 aa29.81■■■□□ 2.36
CFD-202ENST00000592860 ADAMTSL1Q8N6G6 1762 aa29.8■■■□□ 2.36
CFD-202ENST00000592860 PASKQ96RG2 1323 aa29.8■■■□□ 2.36
CFD-202ENST00000592860 COL4A1P02462 1669 aa29.8■■■□□ 2.36
CFD-202ENST00000592860 IRS4O14654 1257 aaPredicted RBP29.8■■■□□ 2.36
CFD-202ENST00000592860 ANP32CO43423 234 aa29.8■■■□□ 2.36
CFD-202ENST00000592860 SCNN1DP51172 638 aa29.8■■■□□ 2.36
CFD-202ENST00000592860 CCDC30Q5VVM6 783 aa29.8■■■□□ 2.36
CFD-202ENST00000592860 LTBP1Q14766 1721 aa29.79■■■□□ 2.36
CFD-202ENST00000592860 SUPT20HQ8NEM7 779 aa29.79■■■□□ 2.36
CFD-202ENST00000592860 CELF1Q92879 486 aaKnown RBP29.79■■■□□ 2.36
CFD-202ENST00000592860 CLEC11AQ9Y240 323 aa29.79■■■□□ 2.36
CFD-202ENST00000592860 VPS33BQ9H267 617 aa29.78■■■□□ 2.36
CFD-202ENST00000592860 DUOX1Q9NRD9 1551 aa29.77■■■□□ 2.36
CFD-202ENST00000592860 TAF1P21675 1872 aa29.77■■■□□ 2.36
CFD-202ENST00000592860 ITGBL1O95965 494 aaPredicted RBP29.77■■■□□ 2.36
CFD-202ENST00000592860 PNMA8AQ86V59 439 aaPredicted RBP29.77■■■□□ 2.36
CFD-202ENST00000592860 ZBTB38Q8NAP3 1195 aaPredicted RBP29.77■■■□□ 2.36
CFD-202ENST00000592860 CREBZFQ9NS37 354 aa29.77■■■□□ 2.36
CFD-202ENST00000592860 EPS15P42566 896 aa29.76■■■□□ 2.35
CFD-202ENST00000592860 KIAA2012Q0VF49 1180 aa29.76■■■□□ 2.35
CFD-202ENST00000592860 MAP1SQ66K74 1059 aaPredicted RBP29.75■■■□□ 2.35
CFD-202ENST00000592860 TMC4Q7Z404 712 aa29.75■■■□□ 2.35
CFD-202ENST00000592860 ZNRF3Q9ULT6 936 aa29.75■■■□□ 2.35
CFD-202ENST00000592860 LRRC37AA6NMS7 1700 aa29.74■■■□□ 2.35
CFD-202ENST00000592860 LMOD1P29536 600 aaPredicted RBP29.74■■■□□ 2.35
CFD-202ENST00000592860 CXCL9Q07325 125 aa29.74■■■□□ 2.35
CFD-202ENST00000592860 CCDC191Q8NCU4 936 aa29.74■■■□□ 2.35
CFD-202ENST00000592860 JARID2Q92833 1246 aaPredicted RBP29.74■■■□□ 2.35
CFD-202ENST00000592860 METTL22Q9BUU2 404 aaPredicted RBP29.74■■■□□ 2.35
CFD-202ENST00000592860 MAP3K2Q9Y2U5 619 aa29.73■■■□□ 2.35
CFD-202ENST00000592860 IL16Q14005 1332 aa29.72■■■□□ 2.35
CFD-202ENST00000592860 DDX58O95786 925 aaKnown RBP29.72■■■□□ 2.35
CFD-202ENST00000592860 TWISTNBQ3B726 338 aaPredicted RBP29.72■■■□□ 2.35
CFD-202ENST00000592860 CHMP4AQ9BY43 222 aa29.72■■■□□ 2.35
CFD-202ENST00000592860 CWC25Q9NXE8 425 aaPredicted RBP29.72■■■□□ 2.35
CFD-202ENST00000592860 MKRN1Q9UHC7 482 aaKnown RBP29.72■■■□□ 2.35
CFD-202ENST00000592860 PCCAP05165 728 aaPredicted RBP29.71■■■□□ 2.35
CFD-202ENST00000592860 NCBP3Q53F19 620 aaKnown RBP29.71■■■□□ 2.35
CFD-202ENST00000592860 IFFO2Q5TF58 517 aa29.71■■■□□ 2.35
CFD-202ENST00000592860 CNTROBQ8N137 903 aa29.71■■■□□ 2.35
CFD-202ENST00000592860 SALL2Q9Y467 1007 aaPredicted RBP29.71■■■□□ 2.35
CFD-202ENST00000592860 PI4KAP2A4QPH2 592 aa29.7■■■□□ 2.35
CFD-202ENST00000592860 PI4KAP1Q8N8J0 262 aa29.7■■■□□ 2.35
CFD-202ENST00000592860 SEC31BQ9NQW1 1179 aa29.7■■■□□ 2.35
CFD-202ENST00000592860 YDJCA8MPS7 323 aa29.69■■■□□ 2.34
CFD-202ENST00000592860 RAD17O75943 681 aa29.69■■■□□ 2.34
CFD-202ENST00000592860 GPSM2P81274 684 aa29.69■■■□□ 2.34
CFD-202ENST00000592860 KSR2Q6VAB6 950 aa29.69■■■□□ 2.34
CFD-202ENST00000592860 G2E3Q7L622 706 aa29.69■■■□□ 2.34
CFD-202ENST00000592860 STK31Q9BXU1 1019 aa29.69■■■□□ 2.34
CFD-202ENST00000592860 NSFL1CQ9UNZ2 370 aaKnown RBP29.69■■■□□ 2.34
CFD-202ENST00000592860 FANCIQ9NVI1 1328 aa29.69■■■□□ 2.34
CFD-202ENST00000592860 IGKV5-2P06315 115 aa29.68■■■□□ 2.34
CFD-202ENST00000592860 GMPSP49915 693 aaPredicted RBP29.68■■■□□ 2.34
CFD-202ENST00000592860 RPS8P62241 208 aaKnown RBP29.68■■■□□ 2.34
CFD-202ENST00000592860 GPRC5DQ9NZD1 345 aa29.68■■■□□ 2.34
CFD-202ENST00000592860 TMEM88BA6NKF7 163 aa29.67■■■□□ 2.34
CFD-202ENST00000592860 CIAPIN1Q6FI81 312 aa29.67■■■□□ 2.34
CFD-202ENST00000592860 CCDC85AQ96PX6 553 aaPredicted RBP29.67■■■□□ 2.34
CFD-202ENST00000592860 POLLQ9UGP5 575 aa29.67■■■□□ 2.34
CFD-202ENST00000592860 USP50Q70EL3 339 aaPredicted RBP29.66■■■□□ 2.34
CFD-202ENST00000592860 CNTNAP1P78357 1384 aa29.65■■■□□ 2.34
CFD-202ENST00000592860 PDE8AO60658 829 aa29.65■■■□□ 2.34
CFD-202ENST00000592860 WASHC4Q2M389 1173 aa29.65■■■□□ 2.34
CFD-202ENST00000592860 GPR101Q96P66 508 aaPredicted RBP29.65■■■□□ 2.34
CFD-202ENST00000592860 SLC4A2P04920 1241 aa29.64■■■□□ 2.34
CFD-202ENST00000592860 HSPA1AP0DMV8 641 aaKnown RBP29.64■■■□□ 2.34
CFD-202ENST00000592860 HSPA1BP0DMV9 641 aaKnown RBP29.64■■■□□ 2.34
CFD-202ENST00000592860 HSP90B1P14625 803 aaKnown RBP29.64■■■□□ 2.34
CFD-202ENST00000592860 CCDC152Q4G0S7 254 aa29.64■■■□□ 2.34
CFD-202ENST00000592860 ADARB2Q9NS39 739 aaKnown RBP29.64■■■□□ 2.34
CFD-202ENST00000592860 C6orf229H3BNL8 230 aa29.63■■■□□ 2.33
CFD-202ENST00000592860 RIMBP2O15034 1052 aa29.63■■■□□ 2.33
CFD-202ENST00000592860 FMR1Q06787 632 aaKnown RBP eCLIP29.63■■■□□ 2.33
CFD-202ENST00000592860 CWF19L2Q2TBE0 894 aaKnown RBP29.63■■■□□ 2.33
CFD-202ENST00000592860 DBNDD1Q9H9R9 158 aa29.63■■■□□ 2.33
CFD-202ENST00000592860 TNIP1Q15025 636 aa29.62■■■□□ 2.33
CFD-202ENST00000592860 WDR63Q8IWG1 891 aa29.62■■■□□ 2.33
CFD-202ENST00000592860 TBC1D16Q8TBP0 767 aa29.62■■■□□ 2.33
CFD-202ENST00000592860 CDHR2Q9BYE9 1310 aa29.62■■■□□ 2.33
CFD-202ENST00000592860 SPINK5Q9NQ38 1064 aaPredicted RBP29.61■■■□□ 2.33
CFD-202ENST00000592860 SHTN1A0MZ66 631 aa29.6■■■□□ 2.33
CFD-202ENST00000592860 NEURL1BA8MQ27 555 aa29.6■■■□□ 2.33
CFD-202ENST00000592860 BCL2L13Q9BXK5 485 aa29.6■■■□□ 2.33
CFD-202ENST00000592860 CTSWP56202 376 aa29.59■■■□□ 2.33
CFD-202ENST00000592860 NEXNQ0ZGT2 675 aa29.59■■■□□ 2.33
CFD-202ENST00000592860 FLIIQ13045 1269 aa29.59■■■□□ 2.33
CFD-202ENST00000592860 COL13A1Q5TAT6 717 aaPredicted RBP29.59■■■□□ 2.33
CFD-202ENST00000592860 FAM9BQ8IZU0 186 aa29.59■■■□□ 2.33
CFD-202ENST00000592860 PODXL2Q9NZ53 605 aa29.59■■■□□ 2.33
CFD-202ENST00000592860 TRAF5O00463 557 aa29.58■■■□□ 2.33
CFD-202ENST00000592860 VAMP4O75379 141 aa29.58■■■□□ 2.33
CFD-202ENST00000592860 EXOSC9Q06265 439 aaKnown RBP29.58■■■□□ 2.33
CFD-202ENST00000592860 DOK7Q18PE1 504 aa29.58■■■□□ 2.33
CFD-202ENST00000592860 ZBTB12Q9Y330 459 aaPredicted RBP29.58■■■□□ 2.33
CFD-202ENST00000592860 PSMD14O00487 310 aa29.57■■■□□ 2.32
CFD-202ENST00000592860 ECE2O60344 883 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms