RNA–Protein interactions for RNA: ENST00000592657.1

LDLRAD4-216, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-216ENST00000592657 ANKRD36BQ8N2N9 1353 aa8.67□□□□□ -1.02
LDLRAD4-216ENST00000592657 BEND7Q8N7W2 519 aaPredicted RBP8.67□□□□□ -1.02
LDLRAD4-216ENST00000592657 RGPD5Q99666 1765 aa8.67□□□□□ -1.02
LDLRAD4-216ENST00000592657 GOPCQ9HD26 462 aa8.67□□□□□ -1.02
LDLRAD4-216ENST00000592657 PODXL2Q9NZ53 605 aa8.67□□□□□ -1.02
LDLRAD4-216ENST00000592657 POGKQ9P215 609 aa8.67□□□□□ -1.02
LDLRAD4-216ENST00000592657 ZC3H4Q9UPT8 1303 aaKnown RBP8.67□□□□□ -1.02
LDLRAD4-216ENST00000592657 NCOA3Q9Y6Q9 1424 aa8.67□□□□□ -1.02
LDLRAD4-216ENST00000592657 MST1RQ04912 1400 aa8.66□□□□□ -1.02
LDLRAD4-216ENST00000592657 A0A1W2PP64 1363 aa8.66□□□□□ -1.02
LDLRAD4-216ENST00000592657 MSTNO14793 375 aa8.66□□□□□ -1.02
LDLRAD4-216ENST00000592657 PTGIRP43119 386 aa8.66□□□□□ -1.02
LDLRAD4-216ENST00000592657 CDCA8Q53HL2 280 aa8.66□□□□□ -1.02
LDLRAD4-216ENST00000592657 DIEXFQ68CQ4 756 aaKnown RBP8.66□□□□□ -1.02
LDLRAD4-216ENST00000592657 ADAM32Q8TC27 787 aa8.66□□□□□ -1.02
LDLRAD4-216ENST00000592657 CPSF1Q10570 1443 aaKnown RBP8.65□□□□□ -1.02
LDLRAD4-216ENST00000592657 NSD3Q9BZ95 1437 aa8.65□□□□□ -1.02
LDLRAD4-216ENST00000592657 PRR36Q9H6K5 1346 aa8.65□□□□□ -1.02
LDLRAD4-216ENST00000592657 SENP3-EIF4A1A0A087X0R7 540 aa8.65□□□□□ -1.02
LDLRAD4-216ENST00000592657 ADH1AP07327 375 aa8.65□□□□□ -1.02
LDLRAD4-216ENST00000592657 DDX10Q13206 875 aaKnown RBP8.65□□□□□ -1.02
LDLRAD4-216ENST00000592657 RIPOR1Q6ZS17 1223 aa8.65□□□□□ -1.02
LDLRAD4-216ENST00000592657 ZNF784Q8NCA9 323 aaPredicted RBP8.65□□□□□ -1.02
LDLRAD4-216ENST00000592657 PUS7Q96PZ0 661 aaKnown RBP8.65□□□□□ -1.02
LDLRAD4-216ENST00000592657 GPSM3Q9Y4H4 160 aa8.65□□□□□ -1.02
LDLRAD4-216ENST00000592657 PEAK1Q9H792 1746 aa8.65□□□□□ -1.03
LDLRAD4-216ENST00000592657 MED1Q15648 1581 aaPredicted RBP8.65□□□□□ -1.03
LDLRAD4-216ENST00000592657 TMEM94Q12767 1356 aa8.64□□□□□ -1.03
LDLRAD4-216ENST00000592657 RGPD2P0DJD1 1756 aa8.64□□□□□ -1.03
LDLRAD4-216ENST00000592657 ZNF335Q9H4Z2 1342 aaPredicted RBP8.64□□□□□ -1.03
LDLRAD4-216ENST00000592657 PHLPP1O60346 1717 aa8.64□□□□□ -1.03
LDLRAD4-216ENST00000592657 NPC1L1Q9UHC9 1359 aa8.63□□□□□ -1.03
LDLRAD4-216ENST00000592657 AHDC1Q5TGY3 1603 aaPredicted RBP8.63□□□□□ -1.03
LDLRAD4-216ENST00000592657 DLG5Q8TDM6 1919 aa8.63□□□□□ -1.03
LDLRAD4-216ENST00000592657 ERVH48-1M5A8F1 160 aa8.63□□□□□ -1.03
LDLRAD4-216ENST00000592657 WASLO00401 505 aaPredicted RBP8.63□□□□□ -1.03
LDLRAD4-216ENST00000592657 RHOQP17081 205 aa8.63□□□□□ -1.03
LDLRAD4-216ENST00000592657 ARID3AQ99856 593 aa8.63□□□□□ -1.03
LDLRAD4-216ENST00000592657 POLR3GLQ9BT43 218 aa8.63□□□□□ -1.03
LDLRAD4-216ENST00000592657 C1orf115Q9H7X2 142 aa8.63□□□□□ -1.03
LDLRAD4-216ENST00000592657 WNK3Q9BYP7 1800 aa8.63□□□□□ -1.03
LDLRAD4-216ENST00000592657 IQSEC2Q5JU85 1478 aa8.63□□□□□ -1.03
LDLRAD4-216ENST00000592657 C1orf167Q5SNV9 1468 aa8.63□□□□□ -1.03
LDLRAD4-216ENST00000592657 EDC4Q6P2E9 1401 aaKnown RBP8.63□□□□□ -1.03
LDLRAD4-216ENST00000592657 FAM208AQ9UK61 1670 aaKnown RBP8.62□□□□□ -1.03
LDLRAD4-216ENST00000592657 POLR3AO14802 1390 aaPredicted RBP8.62□□□□□ -1.03
LDLRAD4-216ENST00000592657 PARD3Q8TEW0 1356 aa8.62□□□□□ -1.03
LDLRAD4-216ENST00000592657 COL22A1Q8NFW1 1626 aaPredicted RBP8.62□□□□□ -1.03
LDLRAD4-216ENST00000592657 CNTNAP5Q8WYK1 1306 aa8.62□□□□□ -1.03
LDLRAD4-216ENST00000592657 AP1G2O75843 785 aa8.62□□□□□ -1.03
LDLRAD4-216ENST00000592657 GALNT6Q8NCL4 622 aa8.62□□□□□ -1.03
LDLRAD4-216ENST00000592657 GMCL1Q96IK5 515 aa8.62□□□□□ -1.03
LDLRAD4-216ENST00000592657 CDK19Q9BWU1 502 aa8.62□□□□□ -1.03
LDLRAD4-216ENST00000592657 MBIPQ9NS73 344 aa8.62□□□□□ -1.03
LDLRAD4-216ENST00000592657 RGPD1P0DJD0 1748 aa8.62□□□□□ -1.03
LDLRAD4-216ENST00000592657 USP6P35125 1406 aa8.62□□□□□ -1.03
LDLRAD4-216ENST00000592657 SSH2Q76I76 1423 aa8.62□□□□□ -1.03
LDLRAD4-216ENST00000592657 COL16A1Q07092 1604 aaPredicted RBP8.62□□□□□ -1.03
LDLRAD4-216ENST00000592657 ADD1P35611 737 aaKnown RBP8.61□□□□□ -1.03
LDLRAD4-216ENST00000592657 SRPK2P78362 688 aaKnown RBP8.61□□□□□ -1.03
LDLRAD4-216ENST00000592657 FOXD4L5Q5VV16 416 aaPredicted RBP8.61□□□□□ -1.03
LDLRAD4-216ENST00000592657 TRERF1Q96PN7 1200 aa8.61□□□□□ -1.03
LDLRAD4-216ENST00000592657 PXDNQ92626 1479 aa8.61□□□□□ -1.03
LDLRAD4-216ENST00000592657 OVOS2A0A0J9YW53 1432 aa8.61□□□□□ -1.03
LDLRAD4-216ENST00000592657 OVOS2Q6IE36 1432 aa8.61□□□□□ -1.03
LDLRAD4-216ENST00000592657 NSD2O96028 1365 aa8.61□□□□□ -1.03
LDLRAD4-216ENST00000592657 SLIT3O75094 1523 aa8.6□□□□□ -1.03
LDLRAD4-216ENST00000592657 CAMTA1Q9Y6Y1 1673 aa8.6□□□□□ -1.03
LDLRAD4-216ENST00000592657 H7C1W4 665 aa8.6□□□□□ -1.03
LDLRAD4-216ENST00000592657 GPR25O00155 361 aa8.6□□□□□ -1.03
LDLRAD4-216ENST00000592657 MEN1O00255 615 aa8.6□□□□□ -1.03
LDLRAD4-216ENST00000592657 BCRP11274 1271 aa8.6□□□□□ -1.03
LDLRAD4-216ENST00000592657 PCMTD1Q96MG8 357 aaPredicted RBP8.6□□□□□ -1.03
LDLRAD4-216ENST00000592657 GAS2L1Q99501 681 aaPredicted RBP8.6□□□□□ -1.03
LDLRAD4-216ENST00000592657 CYLDQ9NQC7 956 aa8.6□□□□□ -1.03
LDLRAD4-216ENST00000592657 CUEDC1Q9NWM3 386 aaPredicted RBP8.6□□□□□ -1.03
LDLRAD4-216ENST00000592657 NSFL1CQ9UNZ2 370 aaKnown RBP8.6□□□□□ -1.03
LDLRAD4-216ENST00000592657 COL18A1P39060 1754 aa8.6□□□□□ -1.03
LDLRAD4-216ENST00000592657 MSH6P52701 1360 aa8.6□□□□□ -1.03
LDLRAD4-216ENST00000592657 KTN1Q86UP2 1357 aaKnown RBP8.6□□□□□ -1.03
LDLRAD4-216ENST00000592657 NFAT5O94916 1531 aa8.59□□□□□ -1.03
LDLRAD4-216ENST00000592657 APBB1O00213 710 aa8.59□□□□□ -1.03
LDLRAD4-216ENST00000592657 LILRA1O75019 489 aa8.59□□□□□ -1.03
LDLRAD4-216ENST00000592657 GAS6Q14393 721 aa8.59□□□□□ -1.03
LDLRAD4-216ENST00000592657 SKIV2LQ15477 1246 aaKnown RBP8.59□□□□□ -1.03
LDLRAD4-216ENST00000592657 PLA2G4EQ3MJ16 856 aa8.59□□□□□ -1.03
LDLRAD4-216ENST00000592657 TRIM22Q8IYM9 498 aa8.59□□□□□ -1.03
LDLRAD4-216ENST00000592657 DCAF5Q96JK2 942 aa8.59□□□□□ -1.03
LDLRAD4-216ENST00000592657 SMG6Q86US8 1419 aaKnown RBP8.59□□□□□ -1.03
LDLRAD4-216ENST00000592657 COL3A1P02461 1466 aaPredicted RBP8.58□□□□□ -1.04
LDLRAD4-216ENST00000592657 RNF144AP50876 292 aaPredicted RBP8.58□□□□□ -1.04
LDLRAD4-216ENST00000592657 SLC27A3Q5K4L6 730 aa8.58□□□□□ -1.04
LDLRAD4-216ENST00000592657 PPP2R2DQ66LE6 453 aa8.58□□□□□ -1.04
LDLRAD4-216ENST00000592657 NUDT16Q96DE0 195 aaKnown RBP8.58□□□□□ -1.04
LDLRAD4-216ENST00000592657 PANK3Q9H999 370 aa8.58□□□□□ -1.04
LDLRAD4-216ENST00000592657 PLCH1Q4KWH8 1693 aa8.58□□□□□ -1.04
LDLRAD4-216ENST00000592657 ATP5J2-PTCD1G3V325 749 aa8.57□□□□□ -1.04
LDLRAD4-216ENST00000592657 PROSER2Q86WR7 435 aaPredicted RBP8.57□□□□□ -1.04
LDLRAD4-216ENST00000592657 ZNF837Q96EG3 531 aaPredicted RBP8.57□□□□□ -1.04
LDLRAD4-216ENST00000592657 NLRP3Q96P20 1036 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms