RNA–Protein interactions for RNA: ENST00000592275.5

USP36-222, Transcript of ubiquitin specific peptidase 36, human

TSL 4

Gene USP36, Length 594 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP36-222	ENST00000592275	ZNRF3	Q9ULT6	936 aa		18.55	■□□□□ 0.56
USP36-222	ENST00000592275	BBOX1	O75936	387 aa		18.54	■□□□□ 0.56
USP36-222	ENST00000592275	AIMP1	Q12904	312 aa	Known RBP	18.54	■□□□□ 0.56
USP36-222	ENST00000592275	CCDC146	Q8IYE0	955 aa		18.54	■□□□□ 0.56
USP36-222	ENST00000592275	SUPT20H	Q8NEM7	779 aa		18.54	■□□□□ 0.56
USP36-222	ENST00000592275	ADARB2	Q9NS39	739 aa	Known RBP	18.54	■□□□□ 0.56
USP36-222	ENST00000592275	CHPF2	Q9P2E5	772 aa		18.54	■□□□□ 0.56
USP36-222	ENST00000592275	ABT1	Q9ULW3	272 aa	Known RBP	18.54	■□□□□ 0.56
USP36-222	ENST00000592275	AIDA	Q96BJ3	306 aa		18.53	■□□□□ 0.56
USP36-222	ENST00000592275	ZNF646	O15015	1829 aa	Predicted RBP	18.53	■□□□□ 0.56
USP36-222	ENST00000592275	YDJC	A8MPS7	323 aa		18.52	■□□□□ 0.56
USP36-222	ENST00000592275	HOXB7	P09629	217 aa		18.52	■□□□□ 0.56
USP36-222	ENST00000592275	GMPS	P49915	693 aa	Predicted RBP	18.52	■□□□□ 0.56
USP36-222	ENST00000592275	LBX1	P52954	281 aa		18.52	■□□□□ 0.56
USP36-222	ENST00000592275	DPP8	Q6V1X1	898 aa	Predicted RBP	18.52	■□□□□ 0.56
USP36-222	ENST00000592275	MPND	Q8N594	471 aa		18.52	■□□□□ 0.56
USP36-222	ENST00000592275	ISCA1	Q9BUE6	129 aa		18.52	■□□□□ 0.56
USP36-222	ENST00000592275	PGAP2	Q9UHJ9	254 aa		18.52	■□□□□ 0.56
USP36-222	ENST00000592275	TLL2	Q9Y6L7	1015 aa		18.52	■□□□□ 0.56
USP36-222	ENST00000592275	PLBD2	Q8NHP8	589 aa		18.51	■□□□□ 0.55
USP36-222	ENST00000592275	RUNDC1	Q96C34	613 aa		18.51	■□□□□ 0.55
USP36-222	ENST00000592275	CAPNS2	Q96L46	248 aa		18.51	■□□□□ 0.55
USP36-222	ENST00000592275	TRMT112	Q9UI30	125 aa	Known RBP	18.51	■□□□□ 0.55
USP36-222	ENST00000592275	HIRA	P54198	1017 aa	Predicted RBP	18.5	■□□□□ 0.55
USP36-222	ENST00000592275	MAP2K1	Q02750	393 aa	Predicted RBP	18.5	■□□□□ 0.55
USP36-222	ENST00000592275	CIAPIN1	Q6FI81	312 aa		18.5	■□□□□ 0.55
USP36-222	ENST00000592275	DDX46	Q7L014	1031 aa	Known RBP	18.5	■□□□□ 0.55
USP36-222	ENST00000592275	MYH3	P11055	1940 aa		18.5	■□□□□ 0.55
USP36-222	ENST00000592275	SHTN1	A0MZ66	631 aa		18.49	■□□□□ 0.55
USP36-222	ENST00000592275	SF3B3	Q15393	1217 aa	Known RBP	18.49	■□□□□ 0.55
USP36-222	ENST00000592275	NEUROD2	Q15784	382 aa		18.49	■□□□□ 0.55
USP36-222	ENST00000592275	HDGFL1	Q5TGJ6	251 aa		18.49	■□□□□ 0.55
USP36-222	ENST00000592275	CYP4F22	Q6NT55	531 aa		18.49	■□□□□ 0.55
USP36-222	ENST00000592275	TMC4	Q7Z404	712 aa		18.49	■□□□□ 0.55
USP36-222	ENST00000592275	TRPM4	Q8TD43	1214 aa		18.49	■□□□□ 0.55
USP36-222	ENST00000592275	CELF1	Q92879	486 aa	Known RBP	18.48	■□□□□ 0.55
USP36-222	ENST00000592275	TMX4	Q9H1E5	349 aa	Predicted RBP	18.48	■□□□□ 0.55
USP36-222	ENST00000592275	SPEF2	Q9C093	1822 aa		18.48	■□□□□ 0.55
USP36-222	ENST00000592275	RAD17	O75943	681 aa		18.47	■□□□□ 0.55
USP36-222	ENST00000592275	SAPCD2	Q86UD0	394 aa		18.47	■□□□□ 0.55
USP36-222	ENST00000592275	ZNF428	Q96B54	188 aa		18.47	■□□□□ 0.55
USP36-222	ENST00000592275	GLIS2	Q9BZE0	524 aa	Predicted RBP	18.47	■□□□□ 0.55
USP36-222	ENST00000592275	CASP8AP2	Q9UKL3	1982 aa		18.46	■□□□□ 0.55
USP36-222	ENST00000592275	ZNF853	P0CG23	659 aa		18.46	■□□□□ 0.55
USP36-222	ENST00000592275	ECE1	P42892	770 aa		18.46	■□□□□ 0.55
USP36-222	ENST00000592275	TRIM28	Q13263	835 aa	Known RBP	18.46	■□□□□ 0.55
USP36-222	ENST00000592275	ANKRD13D	Q6ZTN6	518 aa		18.46	■□□□□ 0.55
USP36-222	ENST00000592275	ZC3H15	Q8WU90	426 aa	Known RBP	18.46	■□□□□ 0.55
USP36-222	ENST00000592275	FAM89A	Q96GI7	184 aa		18.46	■□□□□ 0.55
USP36-222	ENST00000592275	CFAP44	Q96MT7	982 aa		18.46	■□□□□ 0.55
USP36-222	ENST00000592275	DBF4	Q9UBU7	674 aa	Predicted RBP	18.46	■□□□□ 0.55
USP36-222	ENST00000592275	ADAMTS8	Q9UP79	889 aa		18.46	■□□□□ 0.55
USP36-222	ENST00000592275	RTL9	Q8NET4	1388 aa		18.45	■□□□□ 0.54
USP36-222	ENST00000592275	ATP5J2-PTCD1	G3V325	749 aa		18.45	■□□□□ 0.54
USP36-222	ENST00000592275	DDX10	Q13206	875 aa	Known RBP	18.45	■□□□□ 0.54
USP36-222	ENST00000592275	TNIP1	Q15025	636 aa		18.45	■□□□□ 0.54
USP36-222	ENST00000592275	MBIP	Q9NS73	344 aa		18.45	■□□□□ 0.54
USP36-222	ENST00000592275	LAS1L	Q9Y4W2	734 aa	Known RBP	18.45	■□□□□ 0.54
USP36-222	ENST00000592275	ZNF609	O15014	1411 aa		18.45	■□□□□ 0.54
USP36-222	ENST00000592275	CELF2	O95319	508 aa	Known RBP	18.44	■□□□□ 0.54
USP36-222	ENST00000592275	DUSP27	Q5VZP5	1158 aa		18.44	■□□□□ 0.54
USP36-222	ENST00000592275	HHIPL1	Q96JK4	782 aa		18.44	■□□□□ 0.54
USP36-222	ENST00000592275	GPR101	Q96P66	508 aa	Predicted RBP	18.44	■□□□□ 0.54
USP36-222	ENST00000592275	POLL	Q9UGP5	575 aa		18.44	■□□□□ 0.54
USP36-222	ENST00000592275	AOC2	O75106	756 aa		18.43	■□□□□ 0.54
USP36-222	ENST00000592275	GPSM2	P81274	684 aa		18.43	■□□□□ 0.54
USP36-222	ENST00000592275	WDR43	Q15061	677 aa	Known RBP eCLIP	18.43	■□□□□ 0.54
USP36-222	ENST00000592275	MICALL2	Q8IY33	904 aa		18.43	■□□□□ 0.54
USP36-222	ENST00000592275	BCL2L13	Q9BXK5	485 aa		18.43	■□□□□ 0.54
USP36-222	ENST00000592275	HYPK	Q9NX55	129 aa		18.43	■□□□□ 0.54
USP36-222	ENST00000592275	CNOT7	Q9UIV1	285 aa	Known RBP	18.43	■□□□□ 0.54
USP36-222	ENST00000592275	PSMD14	O00487	310 aa		18.42	■□□□□ 0.54
USP36-222	ENST00000592275	EGFR	P00533	1210 aa		18.42	■□□□□ 0.54
USP36-222	ENST00000592275	MAP2K2	P36507	400 aa		18.42	■□□□□ 0.54
USP36-222	ENST00000592275	DPF2	Q92785	391 aa		18.42	■□□□□ 0.54
USP36-222	ENST00000592275	ABHD8	Q96I13	439 aa		18.42	■□□□□ 0.54
USP36-222	ENST00000592275	DBNDD1	Q9H9R9	158 aa		18.42	■□□□□ 0.54
USP36-222	ENST00000592275	ZBTB12	Q9Y330	459 aa	Predicted RBP	18.42	■□□□□ 0.54
USP36-222	ENST00000592275	WASHC4	Q2M389	1173 aa		18.41	■□□□□ 0.54
USP36-222	ENST00000592275	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	18.41	■□□□□ 0.54
USP36-222	ENST00000592275	IRS4	O14654	1257 aa	Predicted RBP	18.4	■□□□□ 0.54
USP36-222	ENST00000592275	GRM1	Q13255	1194 aa		18.4	■□□□□ 0.54
USP36-222	ENST00000592275	CDC37L1	Q7L3B6	337 aa		18.4	■□□□□ 0.54
USP36-222	ENST00000592275	PHAX	Q9H814	394 aa	Known RBP	18.4	■□□□□ 0.54
USP36-222	ENST00000592275	NSFL1C	Q9UNZ2	370 aa	Known RBP	18.4	■□□□□ 0.54
USP36-222	ENST00000592275	AKAP11	Q9UKA4	1901 aa		18.39	■□□□□ 0.53
USP36-222	ENST00000592275	ECE2	O60344	883 aa		18.39	■□□□□ 0.53
USP36-222	ENST00000592275	RTL5	Q5HYW3	569 aa	Predicted RBP	18.39	■□□□□ 0.53
USP36-222	ENST00000592275	DLK2	Q6UY11	383 aa		18.39	■□□□□ 0.53
USP36-222	ENST00000592275	SAMD7	Q7Z3H4	446 aa		18.39	■□□□□ 0.53
USP36-222	ENST00000592275	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	18.39	■□□□□ 0.53
USP36-222	ENST00000592275	TBC1D16	Q8TBP0	767 aa		18.39	■□□□□ 0.53
USP36-222	ENST00000592275	PRKRIP1	Q9H875	184 aa	Predicted RBP	18.39	■□□□□ 0.53
USP36-222	ENST00000592275	KCNQ5	Q9NR82	932 aa		18.39	■□□□□ 0.53
USP36-222	ENST00000592275	IFT57	Q9NWB7	429 aa		18.39	■□□□□ 0.53
USP36-222	ENST00000592275	PODXL2	Q9NZ53	605 aa		18.39	■□□□□ 0.53
USP36-222	ENST00000592275		A0A1B0GUL6	1792 aa		18.39	■□□□□ 0.53
USP36-222	ENST00000592275		H7C1D1	291 aa		18.38	■□□□□ 0.53
USP36-222	ENST00000592275	BRPF1	P55201	1214 aa	Predicted RBP	18.38	■□□□□ 0.53
USP36-222	ENST00000592275	SEC31B	Q9NQW1	1179 aa		18.38	■□□□□ 0.53

Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms