RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TIAM2Q8IVF5 1701 aa12.77□□□□□ -0.36
BRCA1-227ENST00000591849 GCKRQ14397 625 aa12.77□□□□□ -0.37
BRCA1-227ENST00000591849 ALDH1L2Q3SY69 923 aa12.77□□□□□ -0.37
BRCA1-227ENST00000591849 TMC4Q7Z404 712 aa12.77□□□□□ -0.37
BRCA1-227ENST00000591849 SP8Q8IXZ3 490 aa12.77□□□□□ -0.37
BRCA1-227ENST00000591849 TRMT2AQ8IZ69 625 aaKnown RBP12.77□□□□□ -0.37
BRCA1-227ENST00000591849 MPNDQ8N594 471 aa12.77□□□□□ -0.37
BRCA1-227ENST00000591849 SUPT20HQ8NEM7 779 aa12.77□□□□□ -0.37
BRCA1-227ENST00000591849 JDP2Q8WYK2 163 aa12.77□□□□□ -0.37
BRCA1-227ENST00000591849 SSH1Q8WYL5 1049 aa12.77□□□□□ -0.37
BRCA1-227ENST00000591849 C9orf78Q9NZ63 289 aaPredicted RBP12.77□□□□□ -0.37
BRCA1-227ENST00000591849 H7C1W4 665 aa12.76□□□□□ -0.37
BRCA1-227ENST00000591849 RPS8P62241 208 aaKnown RBP12.76□□□□□ -0.37
BRCA1-227ENST00000591849 DPP8Q6V1X1 898 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-227ENST00000591849 C16orf71Q8IYS4 520 aaPredicted RBP12.76□□□□□ -0.37
BRCA1-227ENST00000591849 SRCIN1Q9C0H9 1055 aa12.76□□□□□ -0.37
BRCA1-227ENST00000591849 CDHR2Q9BYE9 1310 aa12.76□□□□□ -0.37
BRCA1-227ENST00000591849 PTPRCP08575 1304 aa12.75□□□□□ -0.37
BRCA1-227ENST00000591849 IARSP41252 1262 aaKnown RBP12.75□□□□□ -0.37
BRCA1-227ENST00000591849 PRELPP51888 382 aa12.75□□□□□ -0.37
BRCA1-227ENST00000591849 CTSWP56202 376 aa12.75□□□□□ -0.37
BRCA1-227ENST00000591849 BEND3Q5T5X7 828 aa12.75□□□□□ -0.37
BRCA1-227ENST00000591849 LARGE2Q8N3Y3 721 aa12.75□□□□□ -0.37
BRCA1-227ENST00000591849 CELF1Q92879 486 aaKnown RBP12.75□□□□□ -0.37
BRCA1-227ENST00000591849 CDC5LQ99459 802 aaKnown RBP12.75□□□□□ -0.37
BRCA1-227ENST00000591849 PSMD1Q99460 953 aa12.75□□□□□ -0.37
BRCA1-227ENST00000591849 SEC31BQ9NQW1 1179 aa12.75□□□□□ -0.37
BRCA1-227ENST00000591849 ZC3H4Q9UPT8 1303 aaKnown RBP12.75□□□□□ -0.37
BRCA1-227ENST00000591849 DICER1Q9UPY3 1922 aaKnown RBP12.75□□□□□ -0.37
BRCA1-227ENST00000591849 SLX4Q8IY92 1834 aa12.74□□□□□ -0.37
BRCA1-227ENST00000591849 COL11A2P13942 1736 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-227ENST00000591849 GLTPD2A6NH11 291 aa12.74□□□□□ -0.37
BRCA1-227ENST00000591849 ALDH1L1O75891 902 aa12.74□□□□□ -0.37
BRCA1-227ENST00000591849 TOMM70O94826 608 aa12.74□□□□□ -0.37
BRCA1-227ENST00000591849 IFFO2Q5TF58 517 aa12.74□□□□□ -0.37
BRCA1-227ENST00000591849 ANKRD18AQ8IVF6 992 aa12.74□□□□□ -0.37
BRCA1-227ENST00000591849 RRAGCQ9HB90 399 aa12.74□□□□□ -0.37
BRCA1-227ENST00000591849 CHMP3Q9Y3E7 222 aa12.74□□□□□ -0.37
BRCA1-227ENST00000591849 G3V3G9 751 aa12.73□□□□□ -0.37
BRCA1-227ENST00000591849 PPIP5K2O43314 1243 aa12.73□□□□□ -0.37
BRCA1-227ENST00000591849 APLP1P51693 650 aa12.73□□□□□ -0.37
BRCA1-227ENST00000591849 EIF6P56537 245 aaKnown RBP12.73□□□□□ -0.37
BRCA1-227ENST00000591849 DCAF8Q5TAQ9 597 aa12.73□□□□□ -0.37
BRCA1-227ENST00000591849 NIM1KQ8IY84 436 aa12.73□□□□□ -0.37
BRCA1-227ENST00000591849 NMRK2Q9NPI5 230 aa12.73□□□□□ -0.37
BRCA1-227ENST00000591849 ANKIB1Q9P2G1 1089 aa12.73□□□□□ -0.37
BRCA1-227ENST00000591849 NSFL1CQ9UNZ2 370 aaKnown RBP12.73□□□□□ -0.37
BRCA1-227ENST00000591849 CACNA1SQ13698 1873 aa12.72□□□□□ -0.37
BRCA1-227ENST00000591849 ANKRD36CQ5JPF3 1778 aa12.72□□□□□ -0.37
BRCA1-227ENST00000591849 ARFGEF2Q9Y6D5 1785 aa12.72□□□□□ -0.37
BRCA1-227ENST00000591849 C6orf229H3BNL8 230 aa12.72□□□□□ -0.37
BRCA1-227ENST00000591849 GRM8O00222 908 aa12.72□□□□□ -0.37
BRCA1-227ENST00000591849 IGHMBP2P38935 993 aaKnown RBP12.72□□□□□ -0.37
BRCA1-227ENST00000591849 TTLL11Q8NHH1 800 aa12.72□□□□□ -0.37
BRCA1-227ENST00000591849 API5Q9BZZ5 524 aaKnown RBP12.72□□□□□ -0.37
BRCA1-227ENST00000591849 NOB1Q9ULX3 412 aaKnown RBP12.72□□□□□ -0.37
BRCA1-227ENST00000591849 IPO8O15397 1037 aaKnown RBP12.71□□□□□ -0.37
BRCA1-227ENST00000591849 VEGFAP15692 232 aaPredicted RBP12.71□□□□□ -0.37
BRCA1-227ENST00000591849 RARSP54136 660 aaKnown RBP12.71□□□□□ -0.37
BRCA1-227ENST00000591849 AOC3Q16853 763 aa12.71□□□□□ -0.37
BRCA1-227ENST00000591849 TAF7LQ5H9L4 462 aa12.71□□□□□ -0.37
BRCA1-227ENST00000591849 EYA3Q99504 573 aa12.71□□□□□ -0.37
BRCA1-227ENST00000591849 VPS33BQ9H267 617 aa12.71□□□□□ -0.37
BRCA1-227ENST00000591849 GREM2Q9H772 168 aa12.71□□□□□ -0.37
BRCA1-227ENST00000591849 FER1L6Q2WGJ9 1857 aa12.71□□□□□ -0.37
BRCA1-227ENST00000591849 ZBED9Q6R2W3 1325 aa12.7□□□□□ -0.38
BRCA1-227ENST00000591849 ANKRD18BA2A2Z9 1011 aa12.7□□□□□ -0.38
BRCA1-227ENST00000591849 DDNO94850 711 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-227ENST00000591849 ITGA6P23229 1130 aa12.7□□□□□ -0.38
BRCA1-227ENST00000591849 GPSM2P81274 684 aa12.7□□□□□ -0.38
BRCA1-227ENST00000591849 SLC51AQ86UW1 340 aa12.7□□□□□ -0.38
BRCA1-227ENST00000591849 RBM46Q8TBY0 533 aaKnown RBP12.7□□□□□ -0.38
BRCA1-227ENST00000591849 FRAT1Q92837 279 aaPredicted RBP12.7□□□□□ -0.38
BRCA1-227ENST00000591849 MPHOSPH8Q99549 860 aa12.7□□□□□ -0.38
BRCA1-227ENST00000591849 PLA2G12BQ9BX93 195 aa12.7□□□□□ -0.38
BRCA1-227ENST00000591849 GJA3Q9Y6H8 435 aa12.7□□□□□ -0.38
BRCA1-227ENST00000591849 KIF16BQ96L93 1317 aa12.69□□□□□ -0.38
BRCA1-227ENST00000591849 RIMBP2O15034 1052 aa12.69□□□□□ -0.38
BRCA1-227ENST00000591849 CCT4P50991 539 aaKnown RBP12.69□□□□□ -0.38
BRCA1-227ENST00000591849 IFIT5Q13325 482 aaKnown RBP12.69□□□□□ -0.38
BRCA1-227ENST00000591849 WASHC4Q2M389 1173 aa12.69□□□□□ -0.38
BRCA1-227ENST00000591849 CCDC57Q2TAC2 916 aa12.69□□□□□ -0.38
BRCA1-227ENST00000591849 LMBR1LQ6UX01 489 aa12.69□□□□□ -0.38
BRCA1-227ENST00000591849 RTFDC1Q9BY42 306 aaPredicted RBP12.69□□□□□ -0.38
BRCA1-227ENST00000591849 GGA1Q9UJY5 639 aa12.69□□□□□ -0.38
BRCA1-227ENST00000591849 UFL1O94874 794 aa12.68□□□□□ -0.38
BRCA1-227ENST00000591849 CSF1RP07333 972 aa12.68□□□□□ -0.38
BRCA1-227ENST00000591849 CASP7P55210 303 aa12.68□□□□□ -0.38
BRCA1-227ENST00000591849 FAM161AQ3B820 660 aa12.68□□□□□ -0.38
BRCA1-227ENST00000591849 ZC3H12CQ9C0D7 883 aaKnown RBP12.68□□□□□ -0.38
BRCA1-227ENST00000591849 BSDC1Q9NW68 430 aaPredicted RBP12.68□□□□□ -0.38
BRCA1-227ENST00000591849 IQCA1LA6NCM1 817 aa12.67□□□□□ -0.38
BRCA1-227ENST00000591849 FZD9O00144 591 aa12.67□□□□□ -0.38
BRCA1-227ENST00000591849 ATP2B4P23634 1241 aa12.67□□□□□ -0.38
BRCA1-227ENST00000591849 LMOD1P29536 600 aaPredicted RBP12.67□□□□□ -0.38
BRCA1-227ENST00000591849 BRPF1P55201 1214 aaPredicted RBP12.67□□□□□ -0.38
BRCA1-227ENST00000591849 FOXO4P98177 505 aa12.67□□□□□ -0.38
BRCA1-227ENST00000591849 KIAA2012Q0VF49 1180 aa12.67□□□□□ -0.38
BRCA1-227ENST00000591849 FSTL1Q12841 308 aa12.67□□□□□ -0.38
BRCA1-227ENST00000591849 ZNRF3Q9ULT6 936 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms