RNA–Protein interactions for RNA: ENST00000591254.1

TRIR-204, Transcript of telomerase RNA component interacting RNase, human

TSL 2

Gene TRIR, Length 988 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIR-204	ENST00000591254	TSR2	Q969E8	191 aa	Known RBP	33.21	■■■□□ 2.91
TRIR-204	ENST00000591254	ZEB1	P37275	1124 aa	Predicted RBP	33.2	■■■□□ 2.91
TRIR-204	ENST00000591254	IFFO2	Q5TF58	517 aa		33.2	■■■□□ 2.91
TRIR-204	ENST00000591254	SCNN1D	P51172	638 aa		33.19	■■■□□ 2.9
TRIR-204	ENST00000591254	MPND	Q8N594	471 aa		33.19	■■■□□ 2.9
TRIR-204	ENST00000591254	RTFDC1	Q9BY42	306 aa	Predicted RBP	33.19	■■■□□ 2.9
TRIR-204	ENST00000591254	CREBZF	Q9NS37	354 aa		33.19	■■■□□ 2.9
TRIR-204	ENST00000591254	MYH3	P11055	1940 aa		33.18	■■■□□ 2.9
TRIR-204	ENST00000591254	CELF1	Q92879	486 aa	Known RBP	33.18	■■■□□ 2.9
TRIR-204	ENST00000591254	MYD88	Q99836	296 aa		33.18	■■■□□ 2.9
TRIR-204	ENST00000591254	SPEF2	Q9C093	1822 aa		33.18	■■■□□ 2.9
TRIR-204	ENST00000591254	ITGBL1	O95965	494 aa	Predicted RBP	33.17	■■■□□ 2.9
TRIR-204	ENST00000591254	MAP1S	Q66K74	1059 aa	Predicted RBP	33.17	■■■□□ 2.9
TRIR-204	ENST00000591254	PNMA8A	Q86V59	439 aa	Predicted RBP	33.17	■■■□□ 2.9
TRIR-204	ENST00000591254	SUPT20H	Q8NEM7	779 aa		33.17	■■■□□ 2.9
TRIR-204	ENST00000591254	MKRN1	Q9UHC7	482 aa	Known RBP	33.17	■■■□□ 2.9
TRIR-204	ENST00000591254	TRPM7	Q96QT4	1865 aa		33.16	■■■□□ 2.9
TRIR-204	ENST00000591254	IRS4	O14654	1257 aa	Predicted RBP	33.16	■■■□□ 2.9
TRIR-204	ENST00000591254	LMOD1	P29536	600 aa	Predicted RBP	33.16	■■■□□ 2.9
TRIR-204	ENST00000591254	EPS15	P42566	896 aa		33.16	■■■□□ 2.9
TRIR-204	ENST00000591254	TRIM28	Q13263	835 aa	Known RBP	33.16	■■■□□ 2.9
TRIR-204	ENST00000591254	SF3B3	Q15393	1217 aa	Known RBP	33.15	■■■□□ 2.9
TRIR-204	ENST00000591254	MRS2	Q9HD23	443 aa		33.15	■■■□□ 2.9
TRIR-204	ENST00000591254	ZNF316	A6NFI3	1004 aa	Predicted RBP	33.13	■■■□□ 2.89
TRIR-204	ENST00000591254	CXCL9	Q07325	125 aa		33.13	■■■□□ 2.89
TRIR-204	ENST00000591254	CCDC30	Q5VVM6	783 aa		33.13	■■■□□ 2.89
TRIR-204	ENST00000591254	WWC1	Q8IX03	1113 aa		33.13	■■■□□ 2.89
TRIR-204	ENST00000591254	VPS33B	Q9H267	617 aa		33.13	■■■□□ 2.89
TRIR-204	ENST00000591254	ZNRF3	Q9ULT6	936 aa		33.13	■■■□□ 2.89
TRIR-204	ENST00000591254	KIAA2012	Q0VF49	1180 aa		33.12	■■■□□ 2.89
TRIR-204	ENST00000591254	JARID2	Q92833	1246 aa	Predicted RBP	33.12	■■■□□ 2.89
TRIR-204	ENST00000591254	CACNA1F	O60840	1977 aa		33.12	■■■□□ 2.89
TRIR-204	ENST00000591254	CCDC27	Q2M243	656 aa		33.11	■■■□□ 2.89
TRIR-204	ENST00000591254	CNTROB	Q8N137	903 aa		33.11	■■■□□ 2.89
TRIR-204	ENST00000591254	TMC4	Q7Z404	712 aa		33.1	■■■□□ 2.89
TRIR-204	ENST00000591254	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	33.1	■■■□□ 2.89
TRIR-204	ENST00000591254	CNTNAP1	P78357	1384 aa		33.09	■■■□□ 2.89
TRIR-204	ENST00000591254	ANP32C	O43423	234 aa		33.08	■■■□□ 2.89
TRIR-204	ENST00000591254	RAD17	O75943	681 aa		33.08	■■■□□ 2.89
TRIR-204	ENST00000591254	HSPA1A	P0DMV8	641 aa	Known RBP	33.08	■■■□□ 2.89
TRIR-204	ENST00000591254	HSPA1B	P0DMV9	641 aa	Known RBP	33.08	■■■□□ 2.89
TRIR-204	ENST00000591254	METTL22	Q9BUU2	404 aa	Predicted RBP	33.08	■■■□□ 2.89
TRIR-204	ENST00000591254	SCN9A	Q15858	1988 aa		33.08	■■■□□ 2.89
TRIR-204	ENST00000591254	TMEM88B	A6NKF7	163 aa		33.07	■■■□□ 2.88
TRIR-204	ENST00000591254	YDJC	A8MPS7	323 aa		33.07	■■■□□ 2.88
TRIR-204	ENST00000591254	SEC31B	Q9NQW1	1179 aa		33.07	■■■□□ 2.88
TRIR-204	ENST00000591254	GPRC5D	Q9NZD1	345 aa		33.07	■■■□□ 2.88
TRIR-204	ENST00000591254	NSFL1C	Q9UNZ2	370 aa	Known RBP	33.07	■■■□□ 2.88
TRIR-204	ENST00000591254	MAP3K2	Q9Y2U5	619 aa		33.07	■■■□□ 2.88
TRIR-204	ENST00000591254	DDX58	O95786	925 aa	Known RBP	33.06	■■■□□ 2.88
TRIR-204	ENST00000591254	GMPS	P49915	693 aa	Predicted RBP	33.06	■■■□□ 2.88
TRIR-204	ENST00000591254	GPSM2	P81274	684 aa		33.06	■■■□□ 2.88
TRIR-204	ENST00000591254	FMR1	Q06787	632 aa	Known RBP eCLIP	33.06	■■■□□ 2.88
TRIR-204	ENST00000591254	CCDC191	Q8NCU4	936 aa		33.06	■■■□□ 2.88
TRIR-204	ENST00000591254	CWC25	Q9NXE8	425 aa	Predicted RBP	33.06	■■■□□ 2.88
TRIR-204	ENST00000591254	SALL2	Q9Y467	1007 aa	Predicted RBP	33.06	■■■□□ 2.88
TRIR-204	ENST00000591254	COL13A1	Q5TAT6	717 aa	Predicted RBP	33.05	■■■□□ 2.88
TRIR-204	ENST00000591254	CIAPIN1	Q6FI81	312 aa		33.05	■■■□□ 2.88
TRIR-204	ENST00000591254	GPR101	Q96P66	508 aa	Predicted RBP	33.05	■■■□□ 2.88
TRIR-204	ENST00000591254	CCDC85A	Q96PX6	553 aa	Predicted RBP	33.05	■■■□□ 2.88
TRIR-204	ENST00000591254	PCCA	P05165	728 aa	Predicted RBP	33.04	■■■□□ 2.88
TRIR-204	ENST00000591254	TWISTNB	Q3B726	338 aa	Predicted RBP	33.04	■■■□□ 2.88
TRIR-204	ENST00000591254	USP50	Q70EL3	339 aa	Predicted RBP	33.03	■■■□□ 2.88
TRIR-204	ENST00000591254	G2E3	Q7L622	706 aa		33.03	■■■□□ 2.88
TRIR-204	ENST00000591254	POLL	Q9UGP5	575 aa		33.03	■■■□□ 2.88
TRIR-204	ENST00000591254	PI4KAP2	A4QPH2	592 aa		33.02	■■■□□ 2.88
TRIR-204	ENST00000591254	RIMBP2	O15034	1052 aa		33.02	■■■□□ 2.88
TRIR-204	ENST00000591254	RPS8	P62241	208 aa	Known RBP	33.02	■■■□□ 2.88
TRIR-204	ENST00000591254	PI4KAP1	Q8N8J0	262 aa		33.02	■■■□□ 2.88
TRIR-204	ENST00000591254	STK31	Q9BXU1	1019 aa		33.02	■■■□□ 2.88
TRIR-204	ENST00000591254	DBNDD1	Q9H9R9	158 aa		33.02	■■■□□ 2.88
TRIR-204	ENST00000591254	POLR2A	P24928	1970 aa	Known RBP	33.01	■■■□□ 2.88
TRIR-204	ENST00000591254	PSME4	Q14997	1843 aa		33.01	■■■□□ 2.87
TRIR-204	ENST00000591254	C6orf229	H3BNL8	230 aa		33.01	■■■□□ 2.87
TRIR-204	ENST00000591254	IGKV5-2	P06315	115 aa		33.01	■■■□□ 2.87
TRIR-204	ENST00000591254	WASHC4	Q2M389	1173 aa		33.01	■■■□□ 2.87
TRIR-204	ENST00000591254	KSR2	Q6VAB6	950 aa		33.01	■■■□□ 2.87
TRIR-204	ENST00000591254	ADARB2	Q9NS39	739 aa	Known RBP	33.01	■■■□□ 2.87
TRIR-204	ENST00000591254	IL16	Q14005	1332 aa		33.01	■■■□□ 2.87
TRIR-204	ENST00000591254	FANCI	Q9NVI1	1328 aa		33.01	■■■□□ 2.87
TRIR-204	ENST00000591254	SHTN1	A0MZ66	631 aa		33	■■■□□ 2.87
TRIR-204	ENST00000591254	BCL2L13	Q9BXK5	485 aa		33	■■■□□ 2.87
TRIR-204	ENST00000591254	CHMP4A	Q9BY43	222 aa		33	■■■□□ 2.87
TRIR-204	ENST00000591254	PDE8A	O60658	829 aa		32.99	■■■□□ 2.87
TRIR-204	ENST00000591254	TRAF5	O00463	557 aa		32.98	■■■□□ 2.87
TRIR-204	ENST00000591254	VEGFB	P49765	207 aa		32.98	■■■□□ 2.87
TRIR-204	ENST00000591254	TNIP1	Q15025	636 aa		32.97	■■■□□ 2.87
TRIR-204	ENST00000591254	CWF19L2	Q2TBE0	894 aa	Known RBP	32.97	■■■□□ 2.87
TRIR-204	ENST00000591254	CCDC152	Q4G0S7	254 aa		32.97	■■■□□ 2.87
TRIR-204	ENST00000591254	TBC1D16	Q8TBP0	767 aa		32.97	■■■□□ 2.87
TRIR-204	ENST00000591254	SLC4A2	P04920	1241 aa		32.96	■■■□□ 2.87
TRIR-204	ENST00000591254	ZBTB12	Q9Y330	459 aa	Predicted RBP	32.96	■■■□□ 2.87
TRIR-204	ENST00000591254	CDHR2	Q9BYE9	1310 aa		32.96	■■■□□ 2.87
TRIR-204	ENST00000591254	HSP90B1	P14625	803 aa	Known RBP	32.95	■■■□□ 2.87
TRIR-204	ENST00000591254	DOK7	Q18PE1	504 aa		32.95	■■■□□ 2.87
TRIR-204	ENST00000591254	TRPM4	Q8TD43	1214 aa		32.95	■■■□□ 2.87
TRIR-204	ENST00000591254	PSMD14	O00487	310 aa		32.94	■■■□□ 2.86
TRIR-204	ENST00000591254	ECE2	O60344	883 aa		32.94	■■■□□ 2.86
TRIR-204	ENST00000591254	NCBP3	Q53F19	620 aa	Known RBP	32.94	■■■□□ 2.86
TRIR-204	ENST00000591254	KCNQ5	Q9NR82	932 aa		32.94	■■■□□ 2.86

Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms