RNA–Protein interactions for RNA: ENST00000590953.5

RANBP3-219, Transcript of RAN binding protein 3, humanhuman

TSL 3

Gene RANBP3, Length 571 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-219ENST00000590953 UBTFL1P0CB47 393 aaPredicted RBP12.47□□□□□ -0.41
RANBP3-219ENST00000590953 CTSWP56202 376 aa12.47□□□□□ -0.41
RANBP3-219ENST00000590953 ITPRIPQ8IWB1 547 aa12.47□□□□□ -0.41
RANBP3-219ENST00000590953 BCS1LQ9Y276 419 aa12.47□□□□□ -0.41
RANBP3-219ENST00000590953 COL11A2P13942 1736 aaPredicted RBP12.47□□□□□ -0.41
RANBP3-219ENST00000590953 CSF1RP07333 972 aa12.46□□□□□ -0.41
RANBP3-219ENST00000590953 RLBP1P12271 317 aa12.46□□□□□ -0.41
RANBP3-219ENST00000590953 RRP1P56182 461 aaKnown RBP12.46□□□□□ -0.41
RANBP3-219ENST00000590953 GPR162Q16538 588 aa12.46□□□□□ -0.41
RANBP3-219ENST00000590953 PELP1Q8IZL8 1130 aaKnown RBP12.46□□□□□ -0.41
RANBP3-219ENST00000590953 TTLL11Q8NHH1 800 aa12.46□□□□□ -0.41
RANBP3-219ENST00000590953 PANK1Q8TE04 598 aa12.46□□□□□ -0.41
RANBP3-219ENST00000590953 SUCLG2Q96I99 432 aa12.46□□□□□ -0.41
RANBP3-219ENST00000590953 CHMP4BQ9H444 224 aaKnown RBP12.46□□□□□ -0.41
RANBP3-219ENST00000590953 RTL9Q8NET4 1388 aa12.45□□□□□ -0.42
RANBP3-219ENST00000590953 BRCA1P38398 1863 aaKnown RBP12.45□□□□□ -0.42
RANBP3-219ENST00000590953 BBOX1O75936 387 aa12.45□□□□□ -0.42
RANBP3-219ENST00000590953 FOXO4P98177 505 aa12.45□□□□□ -0.42
RANBP3-219ENST00000590953 GRAPQ13588 217 aa12.45□□□□□ -0.42
RANBP3-219ENST00000590953 PRPF40BQ6NWY9 871 aaKnown RBP12.45□□□□□ -0.42
RANBP3-219ENST00000590953 GRAPLQ8TC17 118 aaPredicted RBP12.45□□□□□ -0.42
RANBP3-219ENST00000590953 MEIS3Q99687 375 aa12.45□□□□□ -0.42
RANBP3-219ENST00000590953 TMX4Q9H1E5 349 aaPredicted RBP12.45□□□□□ -0.42
RANBP3-219ENST00000590953 WWC3Q9ULE0 1092 aa12.45□□□□□ -0.42
RANBP3-219ENST00000590953 MYH3P11055 1940 aa12.45□□□□□ -0.42
RANBP3-219ENST00000590953 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
RANBP3-219ENST00000590953 MVPQ14764 893 aaKnown RBP12.44□□□□□ -0.42
RANBP3-219ENST00000590953 SOGA3Q5TF21 947 aa12.44□□□□□ -0.42
RANBP3-219ENST00000590953 LMBR1LQ6UX01 489 aa12.44□□□□□ -0.42
RANBP3-219ENST00000590953 TMC4Q7Z404 712 aa12.44□□□□□ -0.42
RANBP3-219ENST00000590953 CCDC85AQ96PX6 553 aaPredicted RBP12.44□□□□□ -0.42
RANBP3-219ENST00000590953 CDC5LQ99459 802 aaKnown RBP12.44□□□□□ -0.42
RANBP3-219ENST00000590953 GREM2Q9H772 168 aa12.44□□□□□ -0.42
RANBP3-219ENST00000590953 DDX19BQ9UMR2 479 aa12.44□□□□□ -0.42
RANBP3-219ENST00000590953 CHMP3Q9Y3E7 222 aa12.44□□□□□ -0.42
RANBP3-219ENST00000590953 ANKRD18BA2A2Z9 1011 aa12.43□□□□□ -0.42
RANBP3-219ENST00000590953 PPEF1O14829 653 aaPredicted RBP12.43□□□□□ -0.42
RANBP3-219ENST00000590953 ZBTB7BO15156 539 aaPredicted RBP12.43□□□□□ -0.42
RANBP3-219ENST00000590953 GNAI2P04899 355 aa12.43□□□□□ -0.42
RANBP3-219ENST00000590953 RPS8P62241 208 aaKnown RBP12.43□□□□□ -0.42
RANBP3-219ENST00000590953 IFIT5Q13325 482 aaKnown RBP12.43□□□□□ -0.42
RANBP3-219ENST00000590953 CCDC57Q2TAC2 916 aa12.43□□□□□ -0.42
RANBP3-219ENST00000590953 RABL6Q3YEC7 729 aaPredicted RBP12.43□□□□□ -0.42
RANBP3-219ENST00000590953 EPHA10Q5JZY3 1008 aa12.43□□□□□ -0.42
RANBP3-219ENST00000590953 CC2D2BQ6DHV5 1058 aa12.43□□□□□ -0.42
RANBP3-219ENST00000590953 KAZALD1Q96I82 304 aa12.43□□□□□ -0.42
RANBP3-219ENST00000590953 BICC1Q9H694 974 aaKnown RBP12.43□□□□□ -0.42
RANBP3-219ENST00000590953 COG6Q9Y2V7 657 aa12.43□□□□□ -0.42
RANBP3-219ENST00000590953 C21orf2O43822 256 aa12.42□□□□□ -0.42
RANBP3-219ENST00000590953 YBX3P16989 372 aaKnown RBP eCLIP12.42□□□□□ -0.42
RANBP3-219ENST00000590953 ITGA6P23229 1130 aa12.42□□□□□ -0.42
RANBP3-219ENST00000590953 FAM161AQ3B820 660 aa12.42□□□□□ -0.42
RANBP3-219ENST00000590953 GRIPAP1Q4V328 841 aa12.42□□□□□ -0.42
RANBP3-219ENST00000590953 C20orf194Q5TEA3 1177 aa12.42□□□□□ -0.42
RANBP3-219ENST00000590953 ANKRD18AQ8IVF6 992 aa12.42□□□□□ -0.42
RANBP3-219ENST00000590953 SEC31BQ9NQW1 1179 aa12.42□□□□□ -0.42
RANBP3-219ENST00000590953 LRRFIP2Q9Y608 721 aaKnown RBP12.42□□□□□ -0.42
RANBP3-219ENST00000590953 UTRNP46939 3433 aa12.42□□□□□ -0.42
RANBP3-219ENST00000590953 ARFGEF1Q9Y6D6 1849 aa12.41□□□□□ -0.42
RANBP3-219ENST00000590953 IGHMBP2P38935 993 aaKnown RBP12.41□□□□□ -0.42
RANBP3-219ENST00000590953 CCDC93Q567U6 631 aa12.41□□□□□ -0.42
RANBP3-219ENST00000590953 TAF7LQ5H9L4 462 aa12.41□□□□□ -0.42
RANBP3-219ENST00000590953 SP8Q8IXZ3 490 aa12.41□□□□□ -0.42
RANBP3-219ENST00000590953 ANKRD44Q8N8A2 993 aa12.41□□□□□ -0.42
RANBP3-219ENST00000590953 C7orf43Q8WVR3 580 aa12.41□□□□□ -0.42
RANBP3-219ENST00000590953 CELF1Q92879 486 aaKnown RBP12.41□□□□□ -0.42
RANBP3-219ENST00000590953 ZNF219Q9P2Y4 722 aaPredicted RBP12.41□□□□□ -0.42
RANBP3-219ENST00000590953 ATP6V0A2Q9Y487 856 aa12.41□□□□□ -0.42
RANBP3-219ENST00000590953 SUPT16HQ9Y5B9 1047 aaKnown RBP12.41□□□□□ -0.42
RANBP3-219ENST00000590953 SLX4Q8IY92 1834 aa12.41□□□□□ -0.42
RANBP3-219ENST00000590953 CACNA1SQ13698 1873 aa12.4□□□□□ -0.42
RANBP3-219ENST00000590953 CENPBP07199 599 aaPredicted RBP12.4□□□□□ -0.42
RANBP3-219ENST00000590953 RTKN2Q8IZC4 609 aa12.4□□□□□ -0.42
RANBP3-219ENST00000590953 MPHOSPH8Q99549 860 aa12.4□□□□□ -0.42
RANBP3-219ENST00000590953 ARHGAP27Q6ZUM4 889 aa12.39□□□□□ -0.43
RANBP3-219ENST00000590953 BSDC1Q9NW68 430 aaPredicted RBP12.39□□□□□ -0.43
RANBP3-219ENST00000590953 MTX1Q13505 466 aa12.38□□□□□ -0.43
RANBP3-219ENST00000590953 ZBTB40Q9NUA8 1239 aa12.38□□□□□ -0.43
RANBP3-219ENST00000590953 TAF1P21675 1872 aa12.38□□□□□ -0.43
RANBP3-219ENST00000590953 SRGAP3O43295 1099 aa12.37□□□□□ -0.43
RANBP3-219ENST00000590953 DPP8Q6V1X1 898 aaPredicted RBP12.37□□□□□ -0.43
RANBP3-219ENST00000590953 LDHAL6AQ6ZMR3 332 aa12.37□□□□□ -0.43
RANBP3-219ENST00000590953 MPNDQ8N594 471 aa12.37□□□□□ -0.43
RANBP3-219ENST00000590953 TAOK3Q9H2K8 898 aa12.37□□□□□ -0.43
RANBP3-219ENST00000590953 CNNM1Q9NRU3 951 aa12.37□□□□□ -0.43
RANBP3-219ENST00000590953 LTBP3Q9NS15 1303 aa12.37□□□□□ -0.43
RANBP3-219ENST00000590953 FKBP4Q02790 459 aaKnown RBP eCLIP12.36□□□□□ -0.437e-6■□□□□ 9.9
RANBP3-219ENST00000590953 OLFM4Q6UX06 510 aa12.36□□□□□ -0.43
RANBP3-219ENST00000590953 SUPT20HQ8NEM7 779 aa12.36□□□□□ -0.43
RANBP3-219ENST00000590953 ZNF594Q96JF6 807 aaPredicted RBP12.36□□□□□ -0.43
RANBP3-219ENST00000590953 PSMD1Q99460 953 aa12.36□□□□□ -0.43
RANBP3-219ENST00000590953 ANKRD2Q9GZV1 360 aa12.36□□□□□ -0.43
RANBP3-219ENST00000590953 C1orf115Q9H7X2 142 aa12.36□□□□□ -0.43
RANBP3-219ENST00000590953 MINPP1Q9UNW1 487 aa12.36□□□□□ -0.43
RANBP3-219ENST00000590953 NSFL1CQ9UNZ2 370 aaKnown RBP12.36□□□□□ -0.43
RANBP3-219ENST00000590953 NFKBIEO00221 500 aa12.35□□□□□ -0.43
RANBP3-219ENST00000590953 RFX5P48382 616 aaPredicted RBP12.35□□□□□ -0.43
RANBP3-219ENST00000590953 ATP8B2P98198 1209 aa12.35□□□□□ -0.43
RANBP3-219ENST00000590953 PTPN12Q05209 780 aaKnown RBP12.35□□□□□ -0.43
RANBP3-219ENST00000590953 RPAP2Q8IXW5 612 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 628.2 ms