RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 ATP5J2-PTCD1G3V325 749 aa28.28■■■□□ 2.12
DDX39A-215ENST00000590696 ZNRF3Q9ULT6 936 aa28.28■■■□□ 2.12
DDX39A-215ENST00000590696 APAF1O14727 1248 aa28.27■■■□□ 2.12
DDX39A-215ENST00000590696 ZNF853P0CG23 659 aa28.27■■■□□ 2.12
DDX39A-215ENST00000590696 VEGFBP49765 207 aa28.27■■■□□ 2.12
DDX39A-215ENST00000590696 FAM89AQ96GI7 184 aa28.27■■■□□ 2.12
DDX39A-215ENST00000590696 CXCL9Q07325 125 aa28.26■■■□□ 2.11
DDX39A-215ENST00000590696 USP50Q70EL3 339 aaPredicted RBP28.26■■■□□ 2.11
DDX39A-215ENST00000590696 TAF1P21675 1872 aa28.25■■■□□ 2.11
DDX39A-215ENST00000590696 DDX60Q8IY21 1712 aaKnown RBP28.24■■■□□ 2.11
DDX39A-215ENST00000590696 KIAA2012Q0VF49 1180 aa28.24■■■□□ 2.11
DDX39A-215ENST00000590696 IFT57Q9NWB7 429 aa28.24■■■□□ 2.11
DDX39A-215ENST00000590696 GPRC5DQ9NZD1 345 aa28.24■■■□□ 2.11
DDX39A-215ENST00000590696 GNAI1P63096 354 aa28.23■■■□□ 2.11
DDX39A-215ENST00000590696 DEFB115Q30KQ5 88 aa28.23■■■□□ 2.11
DDX39A-215ENST00000590696 TMC4Q7Z404 712 aa28.23■■■□□ 2.11
DDX39A-215ENST00000590696 RASSF10A6NK89 507 aa28.22■■■□□ 2.11
DDX39A-215ENST00000590696 ELL2O00472 640 aaPredicted RBP28.22■■■□□ 2.11
DDX39A-215ENST00000590696 SF3B3Q15393 1217 aaKnown RBP28.22■■■□□ 2.11
DDX39A-215ENST00000590696 RTL5Q5HYW3 569 aaPredicted RBP28.22■■■□□ 2.11
DDX39A-215ENST00000590696 ADARB2Q9NS39 739 aaKnown RBP28.22■■■□□ 2.11
DDX39A-215ENST00000590696 CALD1Q05682 793 aaKnown RBP28.21■■■□□ 2.11
DDX39A-215ENST00000590696 FMR1Q06787 632 aaKnown RBP eCLIP28.21■■■□□ 2.11
DDX39A-215ENST00000590696 CIAPIN1Q6FI81 312 aa28.21■■■□□ 2.11
DDX39A-215ENST00000590696 RIC3Q7Z5B4 369 aa28.21■■■□□ 2.11
DDX39A-215ENST00000590696 PHAXQ9H814 394 aaKnown RBP28.21■■■□□ 2.11
DDX39A-215ENST00000590696 ABT1Q9ULW3 272 aaKnown RBP28.21■■■□□ 2.11
DDX39A-215ENST00000590696 FOXN1O15353 648 aa28.2■■■□□ 2.1
DDX39A-215ENST00000590696 CAPN15O75808 1086 aa28.2■■■□□ 2.1
DDX39A-215ENST00000590696 GMPSP49915 693 aaPredicted RBP28.2■■■□□ 2.1
DDX39A-215ENST00000590696 TRIM28Q13263 835 aaKnown RBP28.2■■■□□ 2.1
DDX39A-215ENST00000590696 CELF1Q92879 486 aaKnown RBP28.2■■■□□ 2.1
DDX39A-215ENST00000590696 RAD17O75943 681 aa28.19■■■□□ 2.1
DDX39A-215ENST00000590696 GOLGA2Q08379 1002 aa28.19■■■□□ 2.1
DDX39A-215ENST00000590696 IRS4O14654 1257 aaPredicted RBP28.18■■■□□ 2.1
DDX39A-215ENST00000590696 TNIP1Q15025 636 aa28.18■■■□□ 2.1
DDX39A-215ENST00000590696 DUOX1Q9NRD9 1551 aa28.18■■■□□ 2.1
DDX39A-215ENST00000590696 LRRC37AA6NMS7 1700 aa28.18■■■□□ 2.1
DDX39A-215ENST00000590696 BCL2L13Q9BXK5 485 aa28.17■■■□□ 2.1
DDX39A-215ENST00000590696 NSFL1CQ9UNZ2 370 aaKnown RBP28.17■■■□□ 2.1
DDX39A-215ENST00000590696 YDJCA8MPS7 323 aa28.16■■■□□ 2.1
DDX39A-215ENST00000590696 TRAF5O00463 557 aa28.16■■■□□ 2.1
DDX39A-215ENST00000590696 C8orf58Q8NAV2 365 aa28.16■■■□□ 2.1
DDX39A-215ENST00000590696 AIDAQ96BJ3 306 aa28.16■■■□□ 2.1
DDX39A-215ENST00000590696 WASHC4Q2M389 1173 aa28.15■■■□□ 2.1
DDX39A-215ENST00000590696 MYD88Q99836 296 aa28.15■■■□□ 2.1
DDX39A-215ENST00000590696 CDHR2Q9BYE9 1310 aa28.15■■■□□ 2.1
DDX39A-215ENST00000590696 WDR33Q9C0J8 1336 aaKnown RBP28.15■■■□□ 2.1
DDX39A-215ENST00000590696 CST9Q5W186 159 aa28.14■■■□□ 2.1
DDX39A-215ENST00000590696 ZBTB38Q8NAP3 1195 aaPredicted RBP28.14■■■□□ 2.1
DDX39A-215ENST00000590696 WBP1LQ9NX94 342 aa28.14■■■□□ 2.1
DDX39A-215ENST00000590696 COL4A1P02462 1669 aa28.13■■■□□ 2.09
DDX39A-215ENST00000590696 GPSM2P81274 684 aa28.13■■■□□ 2.09
DDX39A-215ENST00000590696 C6orf229H3BNL8 230 aa28.12■■■□□ 2.09
DDX39A-215ENST00000590696 RIMBP2O15034 1052 aa28.12■■■□□ 2.09
DDX39A-215ENST00000590696 CTCFP49711 727 aaPredicted RBP28.12■■■□□ 2.09
DDX39A-215ENST00000590696 RPS8P62241 208 aaKnown RBP28.12■■■□□ 2.09
DDX39A-215ENST00000590696 POLLQ9UGP5 575 aa28.12■■■□□ 2.09
DDX39A-215ENST00000590696 TRPM7Q96QT4 1865 aa28.11■■■□□ 2.09
DDX39A-215ENST00000590696 DBNDD1Q9H9R9 158 aa28.11■■■□□ 2.09
DDX39A-215ENST00000590696 PRDM10Q9NQV6 1147 aa28.11■■■□□ 2.09
DDX39A-215ENST00000590696 PGAP2Q9UHJ9 254 aa28.11■■■□□ 2.09
DDX39A-215ENST00000590696 CNOT7Q9UIV1 285 aaKnown RBP28.11■■■□□ 2.09
DDX39A-215ENST00000590696 HIRAP54198 1017 aaPredicted RBP28.1■■■□□ 2.09
DDX39A-215ENST00000590696 CCDC30Q5VVM6 783 aa28.1■■■□□ 2.09
DDX39A-215ENST00000590696 CCDC191Q8NCU4 936 aa28.1■■■□□ 2.09
DDX39A-215ENST00000590696 SHTN1A0MZ66 631 aa28.09■■■□□ 2.09
DDX39A-215ENST00000590696 HSP90B1P14625 803 aaKnown RBP28.09■■■□□ 2.09
DDX39A-215ENST00000590696 PAXIP1Q6ZW49 1069 aaPredicted RBP28.09■■■□□ 2.09
DDX39A-215ENST00000590696 TRPM4Q8TD43 1214 aa28.09■■■□□ 2.09
DDX39A-215ENST00000590696 CHMP4AQ9BY43 222 aa28.09■■■□□ 2.09
DDX39A-215ENST00000590696 GLIS2Q9BZE0 524 aaPredicted RBP28.09■■■□□ 2.09
DDX39A-215ENST00000590696 SEC31BQ9NQW1 1179 aa28.09■■■□□ 2.09
DDX39A-215ENST00000590696 ZBTB12Q9Y330 459 aaPredicted RBP28.09■■■□□ 2.09
DDX39A-215ENST00000590696 H7C1D1 291 aa28.08■■■□□ 2.09
DDX39A-215ENST00000590696 PSMD14O00487 310 aa28.08■■■□□ 2.09
DDX39A-215ENST00000590696 PCCAP05165 728 aaPredicted RBP28.08■■■□□ 2.09
DDX39A-215ENST00000590696 MAP2K1Q02750 393 aaPredicted RBP28.08■■■□□ 2.09
DDX39A-215ENST00000590696 CCDC184Q52MB2 194 aa28.08■■■□□ 2.09
DDX39A-215ENST00000590696 TSPYL6Q8N831 410 aa28.08■■■□□ 2.09
DDX39A-215ENST00000590696 ZC3H15Q8WU90 426 aaKnown RBP28.08■■■□□ 2.09
DDX39A-215ENST00000590696 CAPNS2Q96L46 248 aa28.08■■■□□ 2.09
DDX39A-215ENST00000590696 EYA3Q99504 573 aa28.08■■■□□ 2.09
DDX39A-215ENST00000590696 TLL2Q9Y6L7 1015 aa28.08■■■□□ 2.09
DDX39A-215ENST00000590696 DDX58O95786 925 aaKnown RBP28.07■■■□□ 2.08
DDX39A-215ENST00000590696 CYP4F22Q6NT55 531 aa28.07■■■□□ 2.08
DDX39A-215ENST00000590696 MICALL2Q8IY33 904 aa28.07■■■□□ 2.08
DDX39A-215ENST00000590696 TBC1D16Q8TBP0 767 aa28.07■■■□□ 2.08
DDX39A-215ENST00000590696 JARID2Q92833 1246 aaPredicted RBP28.07■■■□□ 2.08
DDX39A-215ENST00000590696 METTL22Q9BUU2 404 aaPredicted RBP28.07■■■□□ 2.08
DDX39A-215ENST00000590696 CWC25Q9NXE8 425 aaPredicted RBP28.07■■■□□ 2.08
DDX39A-215ENST00000590696 CELF2O95319 508 aaKnown RBP28.06■■■□□ 2.08
DDX39A-215ENST00000590696 ECE1P42892 770 aa28.06■■■□□ 2.08
DDX39A-215ENST00000590696 LBX1P52954 281 aa28.06■■■□□ 2.08
DDX39A-215ENST00000590696 GRM1Q13255 1194 aa28.06■■■□□ 2.08
DDX39A-215ENST00000590696 DOK7Q18PE1 504 aa28.06■■■□□ 2.08
DDX39A-215ENST00000590696 DPF2Q92785 391 aa28.06■■■□□ 2.08
DDX39A-215ENST00000590696 GPR101Q96P66 508 aaPredicted RBP28.06■■■□□ 2.08
DDX39A-215ENST00000590696 ECE2O60344 883 aa28.05■■■□□ 2.08
DDX39A-215ENST00000590696 PDE8AO60658 829 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms