RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 CASP7P55210 303 aa23.31■■□□□ 1.32
DDX39A-212ENST00000590260 MRPL50Q8N5N7 158 aaKnown RBP23.31■■□□□ 1.32
DDX39A-212ENST00000590260 PSMD1Q99460 953 aa23.31■■□□□ 1.32
DDX39A-212ENST00000590260 H7C1W4 665 aa23.3■■□□□ 1.32
DDX39A-212ENST00000590260 DDX46Q7L014 1031 aaKnown RBP23.3■■□□□ 1.32
DDX39A-212ENST00000590260 LTBP1Q14766 1721 aa23.3■■□□□ 1.32
DDX39A-212ENST00000590260 BBOX1O75936 387 aa23.29■■□□□ 1.32
DDX39A-212ENST00000590260 C1QTNF8P60827 252 aa23.29■■□□□ 1.32
DDX39A-212ENST00000590260 GCKRQ14397 625 aa23.29■■□□□ 1.32
DDX39A-212ENST00000590260 BEND3Q5T5X7 828 aa23.29■■□□□ 1.32
DDX39A-212ENST00000590260 CC2D2BQ6DHV5 1058 aa23.29■■□□□ 1.32
DDX39A-212ENST00000590260 SP8Q8IXZ3 490 aa23.29■■□□□ 1.32
DDX39A-212ENST00000590260 SSH1Q8WYL5 1049 aa23.29■■□□□ 1.32
DDX39A-212ENST00000590260 SEC31BQ9NQW1 1179 aa23.29■■□□□ 1.32
DDX39A-212ENST00000590260 WDR90Q96KV7 1748 aa23.28■■□□□ 1.32
DDX39A-212ENST00000590260 MYH3P11055 1940 aa23.28■■□□□ 1.32
DDX39A-212ENST00000590260 GLTPD2A6NH11 291 aa23.28■■□□□ 1.32
DDX39A-212ENST00000590260 POTECB2RU33 542 aa23.28■■□□□ 1.32
DDX39A-212ENST00000590260 PDE8AO60658 829 aa23.28■■□□□ 1.32
DDX39A-212ENST00000590260 IARSP41252 1262 aaKnown RBP23.28■■□□□ 1.32
DDX39A-212ENST00000590260 NEXNQ0ZGT2 675 aa23.28■■□□□ 1.32
DDX39A-212ENST00000590260 LINS1Q8NG48 757 aa23.28■■□□□ 1.32
DDX39A-212ENST00000590260 UBE3BQ7Z3V4 1068 aa23.26■■□□□ 1.31
DDX39A-212ENST00000590260 CCDC85AQ96PX6 553 aaPredicted RBP23.26■■□□□ 1.31
DDX39A-212ENST00000590260 RTFDC1Q9BY42 306 aaPredicted RBP23.26■■□□□ 1.31
DDX39A-212ENST00000590260 RRAGCQ9HB90 399 aa23.26■■□□□ 1.31
DDX39A-212ENST00000590260 BCL2L13Q9BXK5 485 aa23.25■■□□□ 1.31
DDX39A-212ENST00000590260 ZNF541Q9H0D2 1346 aa23.25■■□□□ 1.31
DDX39A-212ENST00000590260 CTSWP56202 376 aa23.24■■□□□ 1.31
DDX39A-212ENST00000590260 TTLL11Q8NHH1 800 aa23.24■■□□□ 1.31
DDX39A-212ENST00000590260 KDM2BQ8NHM5 1336 aa23.24■■□□□ 1.31
DDX39A-212ENST00000590260 PLA2G12BQ9BX93 195 aa23.23■■□□□ 1.31
DDX39A-212ENST00000590260 SPEF2Q9C093 1822 aa23.22■■□□□ 1.31
DDX39A-212ENST00000590260 FZD9O00144 591 aa23.22■■□□□ 1.31
DDX39A-212ENST00000590260 DDNO94850 711 aaPredicted RBP23.22■■□□□ 1.31
DDX39A-212ENST00000590260 RPS8P62241 208 aaKnown RBP23.22■■□□□ 1.31
DDX39A-212ENST00000590260 GRIPAP1Q4V328 841 aa23.22■■□□□ 1.31
DDX39A-212ENST00000590260 CCDC152Q4G0S7 254 aa23.21■■□□□ 1.31
DDX39A-212ENST00000590260 GREM2Q9H772 168 aa23.21■■□□□ 1.31
DDX39A-212ENST00000590260 RTL9Q8NET4 1388 aa23.2■■□□□ 1.3
DDX39A-212ENST00000590260 GPSM2P81274 684 aa23.2■■□□□ 1.3
DDX39A-212ENST00000590260 HNRNPUQ00839 825 aaKnown RBP eCLIP23.2■■□□□ 1.3
DDX39A-212ENST00000590260 AOC3Q16853 763 aa23.2■■□□□ 1.3
DDX39A-212ENST00000590260 ALDH1L2Q3SY69 923 aa23.2■■□□□ 1.3
DDX39A-212ENST00000590260 TMC4Q7Z404 712 aa23.2■■□□□ 1.3
DDX39A-212ENST00000590260 MPNDQ8N594 471 aa23.2■■□□□ 1.3
DDX39A-212ENST00000590260 DPP8Q6V1X1 898 aaPredicted RBP23.19■■□□□ 1.3
DDX39A-212ENST00000590260 CSF1RP07333 972 aa23.18■■□□□ 1.3
DDX39A-212ENST00000590260 HSP90B1P14625 803 aaKnown RBP23.18■■□□□ 1.3
DDX39A-212ENST00000590260 FOXO4P98177 505 aa23.18■■□□□ 1.3
DDX39A-212ENST00000590260 EPHA10Q5JZY3 1008 aa23.18■■□□□ 1.3
DDX39A-212ENST00000590260 TOMM70O94826 608 aa23.17■■□□□ 1.3
DDX39A-212ENST00000590260 DPY19L2Q6NUT2 758 aa23.17■■□□□ 1.3
DDX39A-212ENST00000590260 SLC4A10Q6U841 1118 aa23.17■■□□□ 1.3
DDX39A-212ENST00000590260 LARGE2Q8N3Y3 721 aa23.17■■□□□ 1.3
DDX39A-212ENST00000590260 POLLQ9UGP5 575 aa23.17■■□□□ 1.3
DDX39A-212ENST00000590260 PTPRCP08575 1304 aa23.16■■□□□ 1.3
DDX39A-212ENST00000590260 PPIP5K2O43314 1243 aa23.16■■□□□ 1.3
DDX39A-212ENST00000590260 ALDH1L1O75891 902 aa23.16■■□□□ 1.3
DDX39A-212ENST00000590260 CT47B1P0C2W7 299 aaPredicted RBP23.16■■□□□ 1.3
DDX39A-212ENST00000590260 KIAA2012Q0VF49 1180 aa23.16■■□□□ 1.3
DDX39A-212ENST00000590260 KAZALD1Q96I82 304 aa23.16■■□□□ 1.3
DDX39A-212ENST00000590260 GPR101Q96P66 508 aaPredicted RBP23.16■■□□□ 1.3
DDX39A-212ENST00000590260 SMC4Q9NTJ3 1288 aa23.16■■□□□ 1.3
DDX39A-212ENST00000590260 WTIPA6NIX2 430 aaPredicted RBP23.15■■□□□ 1.3
DDX39A-212ENST00000590260 GRM8O00222 908 aa23.15■■□□□ 1.3
DDX39A-212ENST00000590260 RARSP54136 660 aaKnown RBP23.15■■□□□ 1.3
DDX39A-212ENST00000590260 FAM161AQ3B820 660 aa23.15■■□□□ 1.3
DDX39A-212ENST00000590260 L3MBTL3Q96JM7 780 aaPredicted RBP23.15■■□□□ 1.3
DDX39A-212ENST00000590260 SRCIN1Q9C0H9 1055 aa23.15■■□□□ 1.3
DDX39A-212ENST00000590260 NSFL1CQ9UNZ2 370 aaKnown RBP23.15■■□□□ 1.3
DDX39A-212ENST00000590260 VEGFAP15692 232 aaPredicted RBP23.14■■□□□ 1.29
DDX39A-212ENST00000590260 BRPF1P55201 1214 aaPredicted RBP23.14■■□□□ 1.29
DDX39A-212ENST00000590260 VPS33BQ9H267 617 aa23.14■■□□□ 1.29
DDX39A-212ENST00000590260 PODXL2Q9NZ53 605 aa23.14■■□□□ 1.29
DDX39A-212ENST00000590260 UTYO14607 1347 aa23.13■■□□□ 1.29
DDX39A-212ENST00000590260 SCN4AP35499 1836 aa23.13■■□□□ 1.29
DDX39A-212ENST00000590260 NBPF7P0C2Y1 421 aaPredicted RBP23.13■■□□□ 1.29
DDX39A-212ENST00000590260 ANKRD18AQ8IVF6 992 aa23.13■■□□□ 1.29
DDX39A-212ENST00000590260 SUPT20HQ8NEM7 779 aa23.13■■□□□ 1.29
DDX39A-212ENST00000590260 TBC1D16Q8TBP0 767 aa23.13■■□□□ 1.29
DDX39A-212ENST00000590260 JDP2Q8WYK2 163 aa23.13■■□□□ 1.29
DDX39A-212ENST00000590260 TMX4Q9H1E5 349 aaPredicted RBP23.13■■□□□ 1.29
DDX39A-212ENST00000590260 A0A1B0GUL6 1792 aa23.12■■□□□ 1.29
DDX39A-212ENST00000590260 YDJCA8MPS7 323 aa23.12■■□□□ 1.29
DDX39A-212ENST00000590260 POTEIP0CG38 1075 aa23.12■■□□□ 1.29
DDX39A-212ENST00000590260 POTEJP0CG39 1038 aa23.12■■□□□ 1.29
DDX39A-212ENST00000590260 RBM46Q8TBY0 533 aaKnown RBP23.12■■□□□ 1.29
DDX39A-212ENST00000590260 ITGA6P23229 1130 aa23.11■■□□□ 1.29
DDX39A-212ENST00000590260 NIM1KQ8IY84 436 aa23.11■■□□□ 1.29
DDX39A-212ENST00000590260 SUCLG2Q96I99 432 aa23.11■■□□□ 1.29
DDX39A-212ENST00000590260 NOB1Q9ULX3 412 aaKnown RBP23.11■■□□□ 1.29
DDX39A-212ENST00000590260 ADAMTSL1Q8N6G6 1762 aa23.11■■□□□ 1.29
DDX39A-212ENST00000590260 CXCL9Q07325 125 aa23.1■■□□□ 1.29
DDX39A-212ENST00000590260 GPC2Q8N158 579 aa23.1■■□□□ 1.29
DDX39A-212ENST00000590260 CDC5LQ99459 802 aaKnown RBP23.1■■□□□ 1.29
DDX39A-212ENST00000590260 BSDC1Q9NW68 430 aaPredicted RBP23.1■■□□□ 1.29
DDX39A-212ENST00000590260 MINPP1Q9UNW1 487 aa23.1■■□□□ 1.29
DDX39A-212ENST00000590260 ZBED9Q6R2W3 1325 aa23.09■■□□□ 1.29
DDX39A-212ENST00000590260 C9orf78Q9NZ63 289 aaPredicted RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms