RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 TAF1P21675 1872 aa23.26■■□□□ 1.31
PRKCSH-211ENST00000590098 ATP5J2-PTCD1G3V325 749 aa23.25■■□□□ 1.31
PRKCSH-211ENST00000590098 EPS15P42566 896 aa23.25■■□□□ 1.31
PRKCSH-211ENST00000590098 TMC4Q7Z404 712 aa23.25■■□□□ 1.31
PRKCSH-211ENST00000590098 FAM89AQ96GI7 184 aa23.25■■□□□ 1.31
PRKCSH-211ENST00000590098 ZNRF3Q9ULT6 936 aa23.25■■□□□ 1.31
PRKCSH-211ENST00000590098 SCNN1DP51172 638 aa23.24■■□□□ 1.31
PRKCSH-211ENST00000590098 DDX60Q8IY21 1712 aaKnown RBP23.24■■□□□ 1.31
PRKCSH-211ENST00000590098 CNTNAP1P78357 1384 aa23.24■■□□□ 1.31
PRKCSH-211ENST00000590098 LTBP1Q14766 1721 aa23.23■■□□□ 1.31
PRKCSH-211ENST00000590098 GOLGA2Q08379 1002 aa23.23■■□□□ 1.31
PRKCSH-211ENST00000590098 RIC3Q7Z5B4 369 aa23.23■■□□□ 1.31
PRKCSH-211ENST00000590098 ELL2O00472 640 aaPredicted RBP23.22■■□□□ 1.31
PRKCSH-211ENST00000590098 FMR1Q06787 632 aaKnown RBP eCLIP23.22■■□□□ 1.31
PRKCSH-211ENST00000590098 USP50Q70EL3 339 aaPredicted RBP23.22■■□□□ 1.31
PRKCSH-211ENST00000590098 VEGFBP49765 207 aa23.21■■□□□ 1.31
PRKCSH-211ENST00000590098 CXCL9Q07325 125 aa23.21■■□□□ 1.31
PRKCSH-211ENST00000590098 KIAA2012Q0VF49 1180 aa23.21■■□□□ 1.31
PRKCSH-211ENST00000590098 TRIM28Q13263 835 aaKnown RBP23.21■■□□□ 1.31
PRKCSH-211ENST00000590098 RTL5Q5HYW3 569 aaPredicted RBP23.21■■□□□ 1.31
PRKCSH-211ENST00000590098 TNS4Q8IZW8 715 aa23.21■■□□□ 1.31
PRKCSH-211ENST00000590098 CHMP4AQ9BY43 222 aa23.21■■□□□ 1.31
PRKCSH-211ENST00000590098 SF3B3Q15393 1217 aaKnown RBP23.2■■□□□ 1.3
PRKCSH-211ENST00000590098 IRS4O14654 1257 aaPredicted RBP23.19■■□□□ 1.3
PRKCSH-211ENST00000590098 TNIP1Q15025 636 aa23.19■■□□□ 1.3
PRKCSH-211ENST00000590098 ADARB2Q9NS39 739 aaKnown RBP23.19■■□□□ 1.3
PRKCSH-211ENST00000590098 GPRC5DQ9NZD1 345 aa23.19■■□□□ 1.3
PRKCSH-211ENST00000590098 CIAPIN1Q6FI81 312 aa23.18■■□□□ 1.3
PRKCSH-211ENST00000590098 PHAXQ9H814 394 aaKnown RBP23.18■■□□□ 1.3
PRKCSH-211ENST00000590098 CAPN15O75808 1086 aa23.17■■□□□ 1.3
PRKCSH-211ENST00000590098 HSP90B1P14625 803 aaKnown RBP23.17■■□□□ 1.3
PRKCSH-211ENST00000590098 GMPSP49915 693 aaPredicted RBP23.17■■□□□ 1.3
PRKCSH-211ENST00000590098 DEFB115Q30KQ5 88 aa23.17■■□□□ 1.3
PRKCSH-211ENST00000590098 C8orf58Q8NAV2 365 aa23.17■■□□□ 1.3
PRKCSH-211ENST00000590098 CELF1Q92879 486 aaKnown RBP23.17■■□□□ 1.3
PRKCSH-211ENST00000590098 ABT1Q9ULW3 272 aaKnown RBP23.17■■□□□ 1.3
PRKCSH-211ENST00000590098 LRRC37AA6NMS7 1700 aa23.16■■□□□ 1.3
PRKCSH-211ENST00000590098 FOXN1O15353 648 aa23.16■■□□□ 1.3
PRKCSH-211ENST00000590098 RAD17O75943 681 aa23.16■■□□□ 1.3
PRKCSH-211ENST00000590098 CCDC30Q5VVM6 783 aa23.16■■□□□ 1.3
PRKCSH-211ENST00000590098 ZBTB38Q8NAP3 1195 aaPredicted RBP23.16■■□□□ 1.3
PRKCSH-211ENST00000590098 MYD88Q99836 296 aa23.16■■□□□ 1.3
PRKCSH-211ENST00000590098 BCL2L13Q9BXK5 485 aa23.16■■□□□ 1.3
PRKCSH-211ENST00000590098 NSFL1CQ9UNZ2 370 aaKnown RBP23.16■■□□□ 1.3
PRKCSH-211ENST00000590098 DDX58O95786 925 aaKnown RBP23.15■■□□□ 1.3
PRKCSH-211ENST00000590098 CDHR2Q9BYE9 1310 aa23.14■■□□□ 1.3
PRKCSH-211ENST00000590098 TRPM7Q96QT4 1865 aa23.14■■□□□ 1.29
PRKCSH-211ENST00000590098 RASSF10A6NK89 507 aa23.14■■□□□ 1.29
PRKCSH-211ENST00000590098 WASHC4Q2M389 1173 aa23.14■■□□□ 1.29
PRKCSH-211ENST00000590098 CCDC191Q8NCU4 936 aa23.14■■□□□ 1.29
PRKCSH-211ENST00000590098 AIDAQ96BJ3 306 aa23.14■■□□□ 1.29
PRKCSH-211ENST00000590098 C6orf229H3BNL8 230 aa23.13■■□□□ 1.29
PRKCSH-211ENST00000590098 TRAF5O00463 557 aa23.13■■□□□ 1.29
PRKCSH-211ENST00000590098 RPS8P62241 208 aaKnown RBP23.13■■□□□ 1.29
PRKCSH-211ENST00000590098 DUOX1Q9NRD9 1551 aa23.13■■□□□ 1.29
PRKCSH-211ENST00000590098 YDJCA8MPS7 323 aa23.12■■□□□ 1.29
PRKCSH-211ENST00000590098 CST9Q5W186 159 aa23.12■■□□□ 1.29
PRKCSH-211ENST00000590098 CWC25Q9NXE8 425 aaPredicted RBP23.12■■□□□ 1.29
PRKCSH-211ENST00000590098 GPSM2P81274 684 aa23.11■■□□□ 1.29
PRKCSH-211ENST00000590098 EYA3Q99504 573 aa23.11■■□□□ 1.29
PRKCSH-211ENST00000590098 METTL22Q9BUU2 404 aaPredicted RBP23.11■■□□□ 1.29
PRKCSH-211ENST00000590098 COL4A1P02462 1669 aa23.11■■□□□ 1.29
PRKCSH-211ENST00000590098 SHTN1A0MZ66 631 aa23.1■■□□□ 1.29
PRKCSH-211ENST00000590098 RIMBP2O15034 1052 aa23.1■■□□□ 1.29
PRKCSH-211ENST00000590098 PCCAP05165 728 aaPredicted RBP23.1■■□□□ 1.29
PRKCSH-211ENST00000590098 CCDC184Q52MB2 194 aa23.1■■□□□ 1.29
PRKCSH-211ENST00000590098 TSPYL6Q8N831 410 aa23.1■■□□□ 1.29
PRKCSH-211ENST00000590098 WBP1LQ9NX94 342 aa23.1■■□□□ 1.29
PRKCSH-211ENST00000590098 POLLQ9UGP5 575 aa23.1■■□□□ 1.29
PRKCSH-211ENST00000590098 CNOT7Q9UIV1 285 aaKnown RBP23.1■■□□□ 1.29
PRKCSH-211ENST00000590098 WDR33Q9C0J8 1336 aaKnown RBP23.09■■□□□ 1.29
PRKCSH-211ENST00000590098 H7C1D1 291 aa23.09■■□□□ 1.29
PRKCSH-211ENST00000590098 HIRAP54198 1017 aaPredicted RBP23.09■■□□□ 1.29
PRKCSH-211ENST00000590098 CCDC152Q4G0S7 254 aa23.09■■□□□ 1.29
PRKCSH-211ENST00000590098 TSR2Q969E8 191 aaKnown RBP23.09■■□□□ 1.29
PRKCSH-211ENST00000590098 STK31Q9BXU1 1019 aa23.09■■□□□ 1.29
PRKCSH-211ENST00000590098 DBNDD1Q9H9R9 158 aa23.09■■□□□ 1.29
PRKCSH-211ENST00000590098 PDE8AO60658 829 aa23.08■■□□□ 1.29
PRKCSH-211ENST00000590098 CCDC27Q2M243 656 aa23.08■■□□□ 1.29
PRKCSH-211ENST00000590098 PAXIP1Q6ZW49 1069 aaPredicted RBP23.08■■□□□ 1.29
PRKCSH-211ENST00000590098 ZC3H15Q8WU90 426 aaKnown RBP23.08■■□□□ 1.29
PRKCSH-211ENST00000590098 MAP3K2Q9Y2U5 619 aa23.08■■□□□ 1.29
PRKCSH-211ENST00000590098 CTCFP49711 727 aaPredicted RBP23.07■■□□□ 1.28
PRKCSH-211ENST00000590098 KSR2Q6VAB6 950 aa23.07■■□□□ 1.28
PRKCSH-211ENST00000590098 TBC1D16Q8TBP0 767 aa23.07■■□□□ 1.28
PRKCSH-211ENST00000590098 JARID2Q92833 1246 aaPredicted RBP23.07■■□□□ 1.28
PRKCSH-211ENST00000590098 ZC3H12CQ9C0D7 883 aaKnown RBP23.07■■□□□ 1.28
PRKCSH-211ENST00000590098 SEC31BQ9NQW1 1179 aa23.07■■□□□ 1.28
PRKCSH-211ENST00000590098 PSMD14O00487 310 aa23.06■■□□□ 1.28
PRKCSH-211ENST00000590098 ZEB1P37275 1124 aaPredicted RBP23.06■■□□□ 1.28
PRKCSH-211ENST00000590098 ECE1P42892 770 aa23.06■■□□□ 1.28
PRKCSH-211ENST00000590098 WWC1Q8IX03 1113 aa23.06■■□□□ 1.28
PRKCSH-211ENST00000590098 MICALL2Q8IY33 904 aa23.06■■□□□ 1.28
PRKCSH-211ENST00000590098 DPF2Q92785 391 aa23.06■■□□□ 1.28
PRKCSH-211ENST00000590098 KCNQ5Q9NR82 932 aa23.06■■□□□ 1.28
PRKCSH-211ENST00000590098 ANKIB1Q9P2G1 1089 aa23.06■■□□□ 1.28
PRKCSH-211ENST00000590098 PGAP2Q9UHJ9 254 aa23.06■■□□□ 1.28
PRKCSH-211ENST00000590098 ZBTB12Q9Y330 459 aaPredicted RBP23.06■■□□□ 1.28
PRKCSH-211ENST00000590098 PI4KAP2A4QPH2 592 aa23.05■■□□□ 1.28
PRKCSH-211ENST00000590098 G3V3G9 751 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms