RNA–Protein interactions for RNA: ENST00000590034.2

SF3A2-205, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 3

Gene SF3A2, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-205ENST00000590034 DPP8Q6V1X1 898 aaPredicted RBP18.23■□□□□ 0.51
SF3A2-205ENST00000590034 CAPNS2Q96L46 248 aa18.23■□□□□ 0.51
SF3A2-205ENST00000590034 ADARB2Q9NS39 739 aaKnown RBP18.23■□□□□ 0.51
SF3A2-205ENST00000590034 CHPF2Q9P2E5 772 aa18.23■□□□□ 0.51
SF3A2-205ENST00000590034 TRMT112Q9UI30 125 aaKnown RBP18.23■□□□□ 0.51
SF3A2-205ENST00000590034 TRIM35Q9UPQ4 493 aa18.23■□□□□ 0.51
SF3A2-205ENST00000590034 SH3TC1Q8TE82 1336 aa18.23■□□□□ 0.51
SF3A2-205ENST00000590034 NEUROD2Q15784 382 aa18.22■□□□□ 0.51
SF3A2-205ENST00000590034 CYP4F22Q6NT55 531 aa18.22■□□□□ 0.51
SF3A2-205ENST00000590034 MPNDQ8N594 471 aa18.22■□□□□ 0.51
SF3A2-205ENST00000590034 SUPT20HQ8NEM7 779 aa18.22■□□□□ 0.51
SF3A2-205ENST00000590034 TMX4Q9H1E5 349 aaPredicted RBP18.22■□□□□ 0.51
SF3A2-205ENST00000590034 YDJCA8MPS7 323 aa18.21■□□□□ 0.51
SF3A2-205ENST00000590034 MAP2K1Q02750 393 aaPredicted RBP18.21■□□□□ 0.51
SF3A2-205ENST00000590034 GRAPQ13588 217 aa18.21■□□□□ 0.51
SF3A2-205ENST00000590034 DDX46Q7L014 1031 aaKnown RBP18.21■□□□□ 0.51
SF3A2-205ENST00000590034 GRAPLQ8TC17 118 aaPredicted RBP18.21■□□□□ 0.51
SF3A2-205ENST00000590034 TLL2Q9Y6L7 1015 aa18.21■□□□□ 0.51
SF3A2-205ENST00000590034 SHTN1A0MZ66 631 aa18.2■□□□□ 0.5
SF3A2-205ENST00000590034 RAD17O75943 681 aa18.2■□□□□ 0.5
SF3A2-205ENST00000590034 HIRAP54198 1017 aaPredicted RBP18.2■□□□□ 0.5
SF3A2-205ENST00000590034 GRM1Q13255 1194 aa18.2■□□□□ 0.5
SF3A2-205ENST00000590034 CIAPIN1Q6FI81 312 aa18.2■□□□□ 0.5
SF3A2-205ENST00000590034 PAXIP1Q6ZW49 1069 aaPredicted RBP18.2■□□□□ 0.5
SF3A2-205ENST00000590034 TRPM4Q8TD43 1214 aa18.19■□□□□ 0.5
SF3A2-205ENST00000590034 GLIS2Q9BZE0 524 aaPredicted RBP18.19■□□□□ 0.5
SF3A2-205ENST00000590034 LAS1LQ9Y4W2 734 aaKnown RBP18.19■□□□□ 0.5
SF3A2-205ENST00000590034 MYBBP1AQ9BQG0 1328 aaKnown RBP18.19■□□□□ 0.5
SF3A2-205ENST00000590034 CDHR2Q9BYE9 1310 aa18.19■□□□□ 0.5
SF3A2-205ENST00000590034 ECE1P42892 770 aa18.18■□□□□ 0.5
SF3A2-205ENST00000590034 HDGFL1Q5TGJ6 251 aa18.18■□□□□ 0.5
SF3A2-205ENST00000590034 GPR101Q96P66 508 aaPredicted RBP18.18■□□□□ 0.5
SF3A2-205ENST00000590034 ISCA1Q9BUE6 129 aa18.18■□□□□ 0.5
SF3A2-205ENST00000590034 PGAP2Q9UHJ9 254 aa18.18■□□□□ 0.5
SF3A2-205ENST00000590034 AOC2O75106 756 aa18.17■□□□□ 0.5
SF3A2-205ENST00000590034 CELF2O95319 508 aaKnown RBP18.17■□□□□ 0.5
SF3A2-205ENST00000590034 SAPCD2Q86UD0 394 aa18.17■□□□□ 0.5
SF3A2-205ENST00000590034 PLBD2Q8NHP8 589 aa18.17■□□□□ 0.5
SF3A2-205ENST00000590034 CELF1Q92879 486 aaKnown RBP18.17■□□□□ 0.5
SF3A2-205ENST00000590034 RUNDC1Q96C34 613 aa18.17■□□□□ 0.5
SF3A2-205ENST00000590034 FAM89AQ96GI7 184 aa18.17■□□□□ 0.5
SF3A2-205ENST00000590034 ATP5J2-PTCD1G3V325 749 aa18.16■□□□□ 0.5
SF3A2-205ENST00000590034 ABHD8Q96I13 439 aa18.16■□□□□ 0.5
SF3A2-205ENST00000590034 BCL2L13Q9BXK5 485 aa18.16■□□□□ 0.5
SF3A2-205ENST00000590034 SCN9AQ15858 1988 aa18.16■□□□□ 0.5
SF3A2-205ENST00000590034 POLR2AP24928 1970 aaKnown RBP18.15■□□□□ 0.5
SF3A2-205ENST00000590034 HOXB7P09629 217 aa18.15■□□□□ 0.5
SF3A2-205ENST00000590034 DDX10Q13206 875 aaKnown RBP18.15■□□□□ 0.5
SF3A2-205ENST00000590034 TNIP1Q15025 636 aa18.15■□□□□ 0.5
SF3A2-205ENST00000590034 SF3B3Q15393 1217 aaKnown RBP18.15■□□□□ 0.5
SF3A2-205ENST00000590034 ANKRD13DQ6ZTN6 518 aa18.15■□□□□ 0.5
SF3A2-205ENST00000590034 TMC4Q7Z404 712 aa18.15■□□□□ 0.5
SF3A2-205ENST00000590034 CNOT7Q9UIV1 285 aaKnown RBP18.15■□□□□ 0.5
SF3A2-205ENST00000590034 TSKSQ9UJT2 592 aa18.15■□□□□ 0.5
SF3A2-205ENST00000590034 RTL5Q5HYW3 569 aaPredicted RBP18.14■□□□□ 0.49
SF3A2-205ENST00000590034 DLK2Q6UY11 383 aa18.14■□□□□ 0.49
SF3A2-205ENST00000590034 MICALL2Q8IY33 904 aa18.14■□□□□ 0.49
SF3A2-205ENST00000590034 ZC3H15Q8WU90 426 aaKnown RBP18.14■□□□□ 0.49
SF3A2-205ENST00000590034 DBF4Q9UBU7 674 aaPredicted RBP18.14■□□□□ 0.49
SF3A2-205ENST00000590034 ADAMTS8Q9UP79 889 aa18.14■□□□□ 0.49
SF3A2-205ENST00000590034 ZBTB12Q9Y330 459 aaPredicted RBP18.14■□□□□ 0.49
SF3A2-205ENST00000590034 EGFRP00533 1210 aa18.13■□□□□ 0.49
SF3A2-205ENST00000590034 DUSP27Q5VZP5 1158 aa18.13■□□□□ 0.49
SF3A2-205ENST00000590034 ZNF408Q9H9D4 720 aa18.13■□□□□ 0.49
SF3A2-205ENST00000590034 DBNDD1Q9H9R9 158 aa18.13■□□□□ 0.49
SF3A2-205ENST00000590034 POLLQ9UGP5 575 aa18.13■□□□□ 0.49
SF3A2-205ENST00000590034 NSFL1CQ9UNZ2 370 aaKnown RBP18.13■□□□□ 0.49
SF3A2-205ENST00000590034 CASP8AP2Q9UKL3 1982 aa18.12■□□□□ 0.49
SF3A2-205ENST00000590034 PSMD14O00487 310 aa18.12■□□□□ 0.49
SF3A2-205ENST00000590034 MAP2K2P36507 400 aa18.12■□□□□ 0.49
SF3A2-205ENST00000590034 GPSM2P81274 684 aa18.12■□□□□ 0.49
SF3A2-205ENST00000590034 WDR43Q15061 677 aaKnown RBP eCLIP18.12■□□□□ 0.49
SF3A2-205ENST00000590034 WASHC4Q2M389 1173 aa18.12■□□□□ 0.49
SF3A2-205ENST00000590034 CFAP44Q96MT7 982 aa18.12■□□□□ 0.49
SF3A2-205ENST00000590034 BEGAINQ9BUH8 593 aa18.12■□□□□ 0.49
SF3A2-205ENST00000590034 MBIPQ9NS73 344 aa18.12■□□□□ 0.49
SF3A2-205ENST00000590034 RTL9Q8NET4 1388 aa18.12■□□□□ 0.49
SF3A2-205ENST00000590034 RIMBP2O15034 1052 aa18.11■□□□□ 0.49
SF3A2-205ENST00000590034 CDC37L1Q7L3B6 337 aa18.11■□□□□ 0.49
SF3A2-205ENST00000590034 SAMD7Q7Z3H4 446 aa18.11■□□□□ 0.49
SF3A2-205ENST00000590034 HHIPL1Q96JK4 782 aa18.11■□□□□ 0.49
SF3A2-205ENST00000590034 KCNQ5Q9NR82 932 aa18.11■□□□□ 0.49
SF3A2-205ENST00000590034 HYPKQ9NX55 129 aa18.11■□□□□ 0.49
SF3A2-205ENST00000590034 IRS4O14654 1257 aaPredicted RBP18.1■□□□□ 0.49
SF3A2-205ENST00000590034 ZNF853P0CG23 659 aa18.1■□□□□ 0.49
SF3A2-205ENST00000590034 TRIM28Q13263 835 aaKnown RBP18.1■□□□□ 0.49
SF3A2-205ENST00000590034 C6orf229H3BNL8 230 aa18.09■□□□□ 0.49
SF3A2-205ENST00000590034 H7C1D1 291 aa18.09■□□□□ 0.49
SF3A2-205ENST00000590034 ECE2O60344 883 aa18.09■□□□□ 0.49
SF3A2-205ENST00000590034 USP48Q86UV5 1035 aa18.09■□□□□ 0.49
SF3A2-205ENST00000590034 DPF2Q92785 391 aa18.09■□□□□ 0.49
SF3A2-205ENST00000590034 ZIC5Q96T25 663 aa18.09■□□□□ 0.49
SF3A2-205ENST00000590034 PSME4Q14997 1843 aa18.09■□□□□ 0.49
SF3A2-205ENST00000590034 DOK7Q18PE1 504 aa18.08■□□□□ 0.48
SF3A2-205ENST00000590034 TBC1D10BQ4KMP7 808 aaPredicted RBP18.08■□□□□ 0.48
SF3A2-205ENST00000590034 TBC1D16Q8TBP0 767 aa18.08■□□□□ 0.48
SF3A2-205ENST00000590034 PHAXQ9H814 394 aaKnown RBP18.08■□□□□ 0.48
SF3A2-205ENST00000590034 SEC31BQ9NQW1 1179 aa18.08■□□□□ 0.48
SF3A2-205ENST00000590034 BRPF1P55201 1214 aaPredicted RBP18.07■□□□□ 0.48
SF3A2-205ENST00000590034 RPS8P62241 208 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms