RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 TAF1P21675 1872 aa27.3■■□□□ 1.96
TMC6-213ENST00000589933 COL13A1Q5TAT6 717 aaPredicted RBP27.29■■□□□ 1.96
TMC6-213ENST00000589933 USP50Q70EL3 339 aaPredicted RBP27.29■■□□□ 1.96
TMC6-213ENST00000589933 RIC3Q7Z5B4 369 aa27.29■■□□□ 1.96
TMC6-213ENST00000589933 DDX60Q8IY21 1712 aaKnown RBP27.29■■□□□ 1.96
TMC6-213ENST00000589933 ISCA1Q9BUE6 129 aa27.28■■□□□ 1.96
TMC6-213ENST00000589933 ATP5J2-PTCD1G3V325 749 aa27.27■■□□□ 1.96
TMC6-213ENST00000589933 ZNF853P0CG23 659 aa27.27■■□□□ 1.96
TMC6-213ENST00000589933 SCNN1DP51172 638 aa27.27■■□□□ 1.96
TMC6-213ENST00000589933 EPS15P42566 896 aa27.26■■□□□ 1.95
TMC6-213ENST00000589933 TNIP1Q15025 636 aa27.26■■□□□ 1.95
TMC6-213ENST00000589933 TNS4Q8IZW8 715 aa27.26■■□□□ 1.95
TMC6-213ENST00000589933 FAM89AQ96GI7 184 aa27.26■■□□□ 1.95
TMC6-213ENST00000589933 KIAA2012Q0VF49 1180 aa27.25■■□□□ 1.95
TMC6-213ENST00000589933 TRIM28Q13263 835 aaKnown RBP27.25■■□□□ 1.95
TMC6-213ENST00000589933 TRPM7Q96QT4 1865 aa27.25■■□□□ 1.95
TMC6-213ENST00000589933 CXCL9Q07325 125 aa27.24■■□□□ 1.95
TMC6-213ENST00000589933 SF3B3Q15393 1217 aaKnown RBP27.24■■□□□ 1.95
TMC6-213ENST00000589933 CIAPIN1Q6FI81 312 aa27.24■■□□□ 1.95
TMC6-213ENST00000589933 BCL2L13Q9BXK5 485 aa27.24■■□□□ 1.95
TMC6-213ENST00000589933 ADARB2Q9NS39 739 aaKnown RBP27.24■■□□□ 1.95
TMC6-213ENST00000589933 LTBP1Q14766 1721 aa27.24■■□□□ 1.95
TMC6-213ENST00000589933 ELL2O00472 640 aaPredicted RBP27.23■■□□□ 1.95
TMC6-213ENST00000589933 DDX58O95786 925 aaKnown RBP27.23■■□□□ 1.95
TMC6-213ENST00000589933 DEFB115Q30KQ5 88 aa27.23■■□□□ 1.95
TMC6-213ENST00000589933 SLC51AQ86UW1 340 aa27.23■■□□□ 1.95
TMC6-213ENST00000589933 ZNF428Q96B54 188 aa27.23■■□□□ 1.95
TMC6-213ENST00000589933 AIDAQ96BJ3 306 aa27.23■■□□□ 1.95
TMC6-213ENST00000589933 GPRC5DQ9NZD1 345 aa27.23■■□□□ 1.95
TMC6-213ENST00000589933 ABT1Q9ULW3 272 aaKnown RBP27.23■■□□□ 1.95
TMC6-213ENST00000589933 CDHR2Q9BYE9 1310 aa27.22■■□□□ 1.95
TMC6-213ENST00000589933 LRRC37AA6NMS7 1700 aa27.22■■□□□ 1.95
TMC6-213ENST00000589933 IRS4O14654 1257 aaPredicted RBP27.22■■□□□ 1.95
TMC6-213ENST00000589933 CCDC30Q5VVM6 783 aa27.22■■□□□ 1.95
TMC6-213ENST00000589933 RTL5Q5HYW3 569 aaPredicted RBP27.21■■□□□ 1.95
TMC6-213ENST00000589933 NSFL1CQ9UNZ2 370 aaKnown RBP27.21■■□□□ 1.95
TMC6-213ENST00000589933 VEGFBP49765 207 aa27.2■■□□□ 1.94
TMC6-213ENST00000589933 ZBTB38Q8NAP3 1195 aaPredicted RBP27.2■■□□□ 1.94
TMC6-213ENST00000589933 WASHC4Q2M389 1173 aa27.19■■□□□ 1.94
TMC6-213ENST00000589933 EYA3Q99504 573 aa27.19■■□□□ 1.94
TMC6-213ENST00000589933 RASSF10A6NK89 507 aa27.18■■□□□ 1.94
TMC6-213ENST00000589933 C6orf229H3BNL8 230 aa27.18■■□□□ 1.94
TMC6-213ENST00000589933 GMPSP49915 693 aaPredicted RBP27.18■■□□□ 1.94
TMC6-213ENST00000589933 PHAXQ9H814 394 aaKnown RBP27.18■■□□□ 1.94
TMC6-213ENST00000589933 RAD17O75943 681 aa27.17■■□□□ 1.94
TMC6-213ENST00000589933 CCDC191Q8NCU4 936 aa27.17■■□□□ 1.94
TMC6-213ENST00000589933 CELF1Q92879 486 aaKnown RBP27.17■■□□□ 1.94
TMC6-213ENST00000589933 MYD88Q99836 296 aa27.17■■□□□ 1.94
TMC6-213ENST00000589933 RPS8P62241 208 aaKnown RBP27.16■■□□□ 1.94
TMC6-213ENST00000589933 H7C1D1 291 aa27.15■■□□□ 1.94
TMC6-213ENST00000589933 C8orf58Q8NAV2 365 aa27.15■■□□□ 1.94
TMC6-213ENST00000589933 STK31Q9BXU1 1019 aa27.15■■□□□ 1.94
TMC6-213ENST00000589933 CWC25Q9NXE8 425 aaPredicted RBP27.15■■□□□ 1.94
TMC6-213ENST00000589933 ECE1P42892 770 aa27.14■■□□□ 1.94
TMC6-213ENST00000589933 CCDC152Q4G0S7 254 aa27.14■■□□□ 1.94
TMC6-213ENST00000589933 G3V3G9 751 aa27.13■■□□□ 1.93
TMC6-213ENST00000589933 PCCAP05165 728 aaPredicted RBP27.13■■□□□ 1.93
TMC6-213ENST00000589933 ZEB1P37275 1124 aaPredicted RBP27.13■■□□□ 1.93
TMC6-213ENST00000589933 CTCFP49711 727 aaPredicted RBP27.13■■□□□ 1.93
TMC6-213ENST00000589933 DCAF8Q5TAQ9 597 aa27.13■■□□□ 1.93
TMC6-213ENST00000589933 PAXIP1Q6ZW49 1069 aaPredicted RBP27.13■■□□□ 1.93
TMC6-213ENST00000589933 ZC3H15Q8WU90 426 aaKnown RBP27.13■■□□□ 1.93
TMC6-213ENST00000589933 METTL22Q9BUU2 404 aaPredicted RBP27.13■■□□□ 1.93
TMC6-213ENST00000589933 WDR33Q9C0J8 1336 aaKnown RBP27.13■■□□□ 1.93
TMC6-213ENST00000589933 PDE8AO60658 829 aa27.12■■□□□ 1.93
TMC6-213ENST00000589933 MAP2K1Q02750 393 aaPredicted RBP27.12■■□□□ 1.93
TMC6-213ENST00000589933 NEXNQ0ZGT2 675 aa27.12■■□□□ 1.93
TMC6-213ENST00000589933 CNOT7Q9UIV1 285 aaKnown RBP27.12■■□□□ 1.93
TMC6-213ENST00000589933 DUOX1Q9NRD9 1551 aa27.12■■□□□ 1.93
TMC6-213ENST00000589933 RIMBP2O15034 1052 aa27.11■■□□□ 1.93
TMC6-213ENST00000589933 CCDC27Q2M243 656 aa27.11■■□□□ 1.93
TMC6-213ENST00000589933 ZC3H12CQ9C0D7 883 aaKnown RBP27.11■■□□□ 1.93
TMC6-213ENST00000589933 FOXN1O15353 648 aa27.1■■□□□ 1.93
TMC6-213ENST00000589933 GPSM2P81274 684 aa27.1■■□□□ 1.93
TMC6-213ENST00000589933 DBNDD1Q9H9R9 158 aa27.1■■□□□ 1.93
TMC6-213ENST00000589933 PRDM10Q9NQV6 1147 aa27.1■■□□□ 1.93
TMC6-213ENST00000589933 ANKIB1Q9P2G1 1089 aa27.1■■□□□ 1.93
TMC6-213ENST00000589933 MYH3P11055 1940 aa27.1■■□□□ 1.93
TMC6-213ENST00000589933 CACNA1FO60840 1977 aa27.09■■□□□ 1.93
TMC6-213ENST00000589933 YDJCA8MPS7 323 aa27.09■■□□□ 1.93
TMC6-213ENST00000589933 CAPN15O75808 1086 aa27.09■■□□□ 1.93
TMC6-213ENST00000589933 DPF2Q92785 391 aa27.09■■□□□ 1.93
TMC6-213ENST00000589933 BEGAINQ9BUH8 593 aa27.09■■□□□ 1.93
TMC6-213ENST00000589933 POLLQ9UGP5 575 aa27.09■■□□□ 1.93
TMC6-213ENST00000589933 MAP3K2Q9Y2U5 619 aa27.09■■□□□ 1.93
TMC6-213ENST00000589933 TRAF5O00463 557 aa27.08■■□□□ 1.93
TMC6-213ENST00000589933 RPS12P25398 132 aaKnown RBP27.08■■□□□ 1.93
TMC6-213ENST00000589933 KSR2Q6VAB6 950 aa27.08■■□□□ 1.93
TMC6-213ENST00000589933 CDC37L1Q7L3B6 337 aa27.08■■□□□ 1.93
TMC6-213ENST00000589933 WBP1LQ9NX94 342 aa27.08■■□□□ 1.93
TMC6-213ENST00000589933 PGAP2Q9UHJ9 254 aa27.08■■□□□ 1.93
TMC6-213ENST00000589933 ECE2O60344 883 aa27.07■■□□□ 1.92
TMC6-213ENST00000589933 MICALL2Q8IY33 904 aa27.07■■□□□ 1.92
TMC6-213ENST00000589933 TBC1D16Q8TBP0 767 aa27.07■■□□□ 1.92
TMC6-213ENST00000589933 CAPNS2Q96L46 248 aa27.07■■□□□ 1.92
TMC6-213ENST00000589933 PODXL2Q9NZ53 605 aa27.07■■□□□ 1.92
TMC6-213ENST00000589933 PSMD14O00487 310 aa27.06■■□□□ 1.92
TMC6-213ENST00000589933 ANKRD18AQ8IVF6 992 aa27.06■■□□□ 1.92
TMC6-213ENST00000589933 TSPYL6Q8N831 410 aa27.06■■□□□ 1.92
TMC6-213ENST00000589933 TSR2Q969E8 191 aaKnown RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms