RNA–Protein interactions for RNA: ENST00000589536.5

GRN-215, Transcript of granulin precursor, human

TSL 3

Gene GRN, Length 546 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRN-215	ENST00000589536	DPP8	Q6V1X1	898 aa	Predicted RBP	31.63	■■■□□ 2.65
GRN-215	ENST00000589536	RIC3	Q7Z5B4	369 aa		31.63	■■■□□ 2.65
GRN-215	ENST00000589536	PNMA8A	Q86V59	439 aa	Predicted RBP	31.63	■■■□□ 2.65
GRN-215	ENST00000589536	SUPT20H	Q8NEM7	779 aa		31.63	■■■□□ 2.65
GRN-215	ENST00000589536	SCNN1D	P51172	638 aa		31.62	■■■□□ 2.65
GRN-215	ENST00000589536	MPND	Q8N594	471 aa		31.62	■■■□□ 2.65
GRN-215	ENST00000589536	DUOX1	Q9NRD9	1551 aa		31.62	■■■□□ 2.65
GRN-215	ENST00000589536	ITGBL1	O95965	494 aa	Predicted RBP	31.61	■■■□□ 2.65
GRN-215	ENST00000589536	IFFO2	Q5TF58	517 aa		31.61	■■■□□ 2.65
GRN-215	ENST00000589536	TMC4	Q7Z404	712 aa		31.61	■■■□□ 2.65
GRN-215	ENST00000589536	TSPYL6	Q8N831	410 aa		31.61	■■■□□ 2.65
GRN-215	ENST00000589536	COL4A1	P02462	1669 aa		31.6	■■■□□ 2.65
GRN-215	ENST00000589536	WWC1	Q8IX03	1113 aa		31.6	■■■□□ 2.65
GRN-215	ENST00000589536	IRS4	O14654	1257 aa	Predicted RBP	31.59	■■■□□ 2.65
GRN-215	ENST00000589536	RTL5	Q5HYW3	569 aa	Predicted RBP	31.59	■■■□□ 2.65
GRN-215	ENST00000589536	CCDC30	Q5VVM6	783 aa		31.59	■■■□□ 2.65
GRN-215	ENST00000589536	TSR2	Q969E8	191 aa	Known RBP	31.59	■■■□□ 2.65
GRN-215	ENST00000589536	ZNF316	A6NFI3	1004 aa	Predicted RBP	31.58	■■■□□ 2.65
GRN-215	ENST00000589536	KIAA2012	Q0VF49	1180 aa		31.58	■■■□□ 2.65
GRN-215	ENST00000589536	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	31.58	■■■□□ 2.65
GRN-215	ENST00000589536	CELF1	Q92879	486 aa	Known RBP	31.58	■■■□□ 2.65
GRN-215	ENST00000589536	CHMP4A	Q9BY43	222 aa		31.58	■■■□□ 2.65
GRN-215	ENST00000589536	ZNRF3	Q9ULT6	936 aa		31.58	■■■□□ 2.65
GRN-215	ENST00000589536	CLEC11A	Q9Y240	323 aa		31.58	■■■□□ 2.65
GRN-215	ENST00000589536	LMOD1	P29536	600 aa	Predicted RBP	31.57	■■■□□ 2.64
GRN-215	ENST00000589536	MYD88	Q99836	296 aa		31.57	■■■□□ 2.64
GRN-215	ENST00000589536	MRS2	Q9HD23	443 aa		31.57	■■■□□ 2.64
GRN-215	ENST00000589536	EPS15	P42566	896 aa		31.55	■■■□□ 2.64
GRN-215	ENST00000589536	CXCL9	Q07325	125 aa		31.55	■■■□□ 2.64
GRN-215	ENST00000589536	NCBP3	Q53F19	620 aa	Known RBP	31.55	■■■□□ 2.64
GRN-215	ENST00000589536	MAP1S	Q66K74	1059 aa	Predicted RBP	31.55	■■■□□ 2.64
GRN-215	ENST00000589536	CNTROB	Q8N137	903 aa		31.54	■■■□□ 2.64
GRN-215	ENST00000589536	CCDC191	Q8NCU4	936 aa		31.54	■■■□□ 2.64
GRN-215	ENST00000589536	IL16	Q14005	1332 aa		31.53	■■■□□ 2.64
GRN-215	ENST00000589536	ANP32C	O43423	234 aa		31.53	■■■□□ 2.64
GRN-215	ENST00000589536	DDX58	O95786	925 aa	Known RBP	31.53	■■■□□ 2.64
GRN-215	ENST00000589536	METTL22	Q9BUU2	404 aa	Predicted RBP	31.53	■■■□□ 2.64
GRN-215	ENST00000589536	MKRN1	Q9UHC7	482 aa	Known RBP	31.52	■■■□□ 2.64
GRN-215	ENST00000589536	PCCA	P05165	728 aa	Predicted RBP	31.51	■■■□□ 2.63
GRN-215	ENST00000589536	CWC25	Q9NXE8	425 aa	Predicted RBP	31.51	■■■□□ 2.63
GRN-215	ENST00000589536	GPRC5D	Q9NZD1	345 aa		31.51	■■■□□ 2.63
GRN-215	ENST00000589536	CNTNAP1	P78357	1384 aa		31.51	■■■□□ 2.63
GRN-215	ENST00000589536	TMEM88B	A6NKF7	163 aa		31.5	■■■□□ 2.63
GRN-215	ENST00000589536	USP50	Q70EL3	339 aa	Predicted RBP	31.5	■■■□□ 2.63
GRN-215	ENST00000589536	MAP3K2	Q9Y2U5	619 aa		31.5	■■■□□ 2.63
GRN-215	ENST00000589536	HSP90B1	P14625	803 aa	Known RBP	31.49	■■■□□ 2.63
GRN-215	ENST00000589536	YDJC	A8MPS7	323 aa		31.48	■■■□□ 2.63
GRN-215	ENST00000589536	TWISTNB	Q3B726	338 aa	Predicted RBP	31.48	■■■□□ 2.63
GRN-215	ENST00000589536	CIAPIN1	Q6FI81	312 aa		31.48	■■■□□ 2.63
GRN-215	ENST00000589536	NSFL1C	Q9UNZ2	370 aa	Known RBP	31.48	■■■□□ 2.63
GRN-215	ENST00000589536	HSPA1A	P0DMV8	641 aa	Known RBP	31.47	■■■□□ 2.63
GRN-215	ENST00000589536	HSPA1B	P0DMV9	641 aa	Known RBP	31.47	■■■□□ 2.63
GRN-215	ENST00000589536	GMPS	P49915	693 aa	Predicted RBP	31.47	■■■□□ 2.63
GRN-215	ENST00000589536	RPS8	P62241	208 aa	Known RBP	31.47	■■■□□ 2.63
GRN-215	ENST00000589536	GPSM2	P81274	684 aa		31.47	■■■□□ 2.63
GRN-215	ENST00000589536	KSR2	Q6VAB6	950 aa		31.47	■■■□□ 2.63
GRN-215	ENST00000589536	STK31	Q9BXU1	1019 aa		31.47	■■■□□ 2.63
GRN-215	ENST00000589536	PI4KAP2	A4QPH2	592 aa		31.46	■■■□□ 2.63
GRN-215	ENST00000589536	RAD17	O75943	681 aa		31.46	■■■□□ 2.63
GRN-215	ENST00000589536	PI4KAP1	Q8N8J0	262 aa		31.46	■■■□□ 2.63
GRN-215	ENST00000589536	SEC31B	Q9NQW1	1179 aa		31.46	■■■□□ 2.63
GRN-215	ENST00000589536	ADARB2	Q9NS39	739 aa	Known RBP	31.46	■■■□□ 2.63
GRN-215	ENST00000589536	POLL	Q9UGP5	575 aa		31.46	■■■□□ 2.63
GRN-215	ENST00000589536	CDHR2	Q9BYE9	1310 aa		31.46	■■■□□ 2.63
GRN-215	ENST00000589536	PDE8A	O60658	829 aa		31.45	■■■□□ 2.63
GRN-215	ENST00000589536	IGKV5-2	P06315	115 aa		31.45	■■■□□ 2.63
GRN-215	ENST00000589536	JARID2	Q92833	1246 aa	Predicted RBP	31.45	■■■□□ 2.63
GRN-215	ENST00000589536	TNIP1	Q15025	636 aa		31.44	■■■□□ 2.62
GRN-215	ENST00000589536	WASHC4	Q2M389	1173 aa		31.44	■■■□□ 2.62
GRN-215	ENST00000589536	FANCI	Q9NVI1	1328 aa		31.44	■■■□□ 2.62
GRN-215	ENST00000589536	CCDC152	Q4G0S7	254 aa		31.43	■■■□□ 2.62
GRN-215	ENST00000589536	G2E3	Q7L622	706 aa		31.43	■■■□□ 2.62
GRN-215	ENST00000589536	C6orf229	H3BNL8	230 aa		31.41	■■■□□ 2.62
GRN-215	ENST00000589536	COL13A1	Q5TAT6	717 aa	Predicted RBP	31.41	■■■□□ 2.62
GRN-215	ENST00000589536	TBC1D16	Q8TBP0	767 aa		31.41	■■■□□ 2.62
GRN-215	ENST00000589536	PODXL2	Q9NZ53	605 aa		31.41	■■■□□ 2.62
GRN-215	ENST00000589536	SLC4A2	P04920	1241 aa		31.4	■■■□□ 2.62
GRN-215	ENST00000589536	WDR63	Q8IWG1	891 aa		31.4	■■■□□ 2.62
GRN-215	ENST00000589536	DBNDD1	Q9H9R9	158 aa		31.4	■■■□□ 2.62
GRN-215	ENST00000589536	RASSF10	A6NK89	507 aa		31.39	■■■□□ 2.62
GRN-215	ENST00000589536	RIMBP2	O15034	1052 aa		31.39	■■■□□ 2.62
GRN-215	ENST00000589536	CCDC85A	Q96PX6	553 aa	Predicted RBP	31.39	■■■□□ 2.62
GRN-215	ENST00000589536	EYA3	Q99504	573 aa		31.39	■■■□□ 2.62
GRN-215	ENST00000589536	BCL2L13	Q9BXK5	485 aa		31.39	■■■□□ 2.62
GRN-215	ENST00000589536	VEGFB	P49765	207 aa		31.38	■■■□□ 2.61
GRN-215	ENST00000589536	FMR1	Q06787	632 aa	Known RBP eCLIP	31.38	■■■□□ 2.61
GRN-215	ENST00000589536	NEXN	Q0ZGT2	675 aa		31.38	■■■□□ 2.61
GRN-215	ENST00000589536	CWF19L2	Q2TBE0	894 aa	Known RBP	31.38	■■■□□ 2.61
GRN-215	ENST00000589536	GPR101	Q96P66	508 aa	Predicted RBP	31.38	■■■□□ 2.61
GRN-215	ENST00000589536	SALL2	Q9Y467	1007 aa	Predicted RBP	31.38	■■■□□ 2.61
GRN-215	ENST00000589536	NEURL1B	A8MQ27	555 aa		31.37	■■■□□ 2.61
GRN-215	ENST00000589536	CTSW	P56202	376 aa		31.37	■■■□□ 2.61
GRN-215	ENST00000589536	TRAF5	O00463	557 aa		31.36	■■■□□ 2.61
GRN-215	ENST00000589536	PSMD14	O00487	310 aa		31.36	■■■□□ 2.61
GRN-215	ENST00000589536	PGAP2	Q9UHJ9	254 aa		31.36	■■■□□ 2.61
GRN-215	ENST00000589536	SHTN1	A0MZ66	631 aa		31.35	■■■□□ 2.61
GRN-215	ENST00000589536	ECE2	O60344	883 aa		31.35	■■■□□ 2.61
GRN-215	ENST00000589536	HIRA	P54198	1017 aa	Predicted RBP	31.35	■■■□□ 2.61
GRN-215	ENST00000589536	FLII	Q13045	1269 aa		31.35	■■■□□ 2.61
GRN-215	ENST00000589536	TRPM4	Q8TD43	1214 aa		31.35	■■■□□ 2.61

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