RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 CHMP4AQ9BY43 222 aa12.64□□□□□ -0.39
PTPN2-208ENST00000589216 ZNF541Q9H0D2 1346 aa12.63□□□□□ -0.39
PTPN2-208ENST00000589216 GRAPQ13588 217 aa12.63□□□□□ -0.39
PTPN2-208ENST00000589216 TRMT2AQ8IZ69 625 aaKnown RBP12.63□□□□□ -0.39
PTPN2-208ENST00000589216 GRAPLQ8TC17 118 aaPredicted RBP12.63□□□□□ -0.39
PTPN2-208ENST00000589216 DNAAF4Q8WXU2 420 aa12.63□□□□□ -0.39
PTPN2-208ENST00000589216 CDHR2Q9BYE9 1310 aa12.62□□□□□ -0.39
PTPN2-208ENST00000589216 C1QTNF8P60827 252 aa12.62□□□□□ -0.39
PTPN2-208ENST00000589216 SF3B3Q15393 1217 aaKnown RBP12.62□□□□□ -0.39
PTPN2-208ENST00000589216 DDX46Q7L014 1031 aaKnown RBP12.62□□□□□ -0.39
PTPN2-208ENST00000589216 UBE3BQ7Z3V4 1068 aa12.62□□□□□ -0.39
PTPN2-208ENST00000589216 CCDC85AQ96PX6 553 aaPredicted RBP12.62□□□□□ -0.39
PTPN2-208ENST00000589216 PSMD1Q99460 953 aa12.62□□□□□ -0.39
PTPN2-208ENST00000589216 BCL2L13Q9BXK5 485 aa12.62□□□□□ -0.39
PTPN2-208ENST00000589216 SEC31BQ9NQW1 1179 aa12.62□□□□□ -0.39
PTPN2-208ENST00000589216 ATP6V0A2Q9Y487 856 aa12.62□□□□□ -0.39
PTPN2-208ENST00000589216 IARSP41252 1262 aaKnown RBP12.61□□□□□ -0.39
PTPN2-208ENST00000589216 CASP7P55210 303 aa12.61□□□□□ -0.39
PTPN2-208ENST00000589216 NEXNQ0ZGT2 675 aa12.61□□□□□ -0.39
PTPN2-208ENST00000589216 GCKRQ14397 625 aa12.61□□□□□ -0.39
PTPN2-208ENST00000589216 RTKN2Q8IZC4 609 aa12.61□□□□□ -0.39
PTPN2-208ENST00000589216 SSH1Q8WYL5 1049 aa12.61□□□□□ -0.39
PTPN2-208ENST00000589216 GLTPD2A6NH11 291 aa12.6□□□□□ -0.39
PTPN2-208ENST00000589216 CTSWP56202 376 aa12.6□□□□□ -0.39
PTPN2-208ENST00000589216 BEND3Q5T5X7 828 aa12.6□□□□□ -0.39
PTPN2-208ENST00000589216 MRPL50Q8N5N7 158 aaKnown RBP12.6□□□□□ -0.39
PTPN2-208ENST00000589216 LINS1Q8NG48 757 aa12.6□□□□□ -0.39
PTPN2-208ENST00000589216 SCN4AP35499 1836 aa12.6□□□□□ -0.39
PTPN2-208ENST00000589216 KDM2BQ8NHM5 1336 aa12.6□□□□□ -0.39
PTPN2-208ENST00000589216 ADAMTSL1Q8N6G6 1762 aa12.59□□□□□ -0.39
PTPN2-208ENST00000589216 POTECB2RU33 542 aa12.59□□□□□ -0.39
PTPN2-208ENST00000589216 H7C1W4 665 aa12.59□□□□□ -0.39
PTPN2-208ENST00000589216 PDE8AO60658 829 aa12.59□□□□□ -0.39
PTPN2-208ENST00000589216 CC2D2BQ6DHV5 1058 aa12.59□□□□□ -0.39
PTPN2-208ENST00000589216 ZNF646O15015 1829 aaPredicted RBP12.59□□□□□ -0.39
PTPN2-208ENST00000589216 SCN9AQ15858 1988 aa12.59□□□□□ -0.39
PTPN2-208ENST00000589216 BBOX1O75936 387 aa12.58□□□□□ -0.4
PTPN2-208ENST00000589216 DDNO94850 711 aaPredicted RBP12.58□□□□□ -0.4
PTPN2-208ENST00000589216 HNRNPUQ00839 825 aaKnown RBP eCLIP12.58□□□□□ -0.4
PTPN2-208ENST00000589216 AOC3Q16853 763 aa12.58□□□□□ -0.4
PTPN2-208ENST00000589216 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.4
PTPN2-208ENST00000589216 SP8Q8IXZ3 490 aa12.58□□□□□ -0.4
PTPN2-208ENST00000589216 GPR101Q96P66 508 aaPredicted RBP12.58□□□□□ -0.4
PTPN2-208ENST00000589216 RRAGCQ9HB90 399 aa12.58□□□□□ -0.4
PTPN2-208ENST00000589216 RTL9Q8NET4 1388 aa12.57□□□□□ -0.4
PTPN2-208ENST00000589216 CEP350Q5VT06 3117 aa12.57□□□□□ -0.4
PTPN2-208ENST00000589216 FAM161AQ3B820 660 aa12.57□□□□□ -0.4
PTPN2-208ENST00000589216 CCDC152Q4G0S7 254 aa12.57□□□□□ -0.4
PTPN2-208ENST00000589216 DPP8Q6V1X1 898 aaPredicted RBP12.57□□□□□ -0.4
PTPN2-208ENST00000589216 TTLL11Q8NHH1 800 aa12.57□□□□□ -0.4
PTPN2-208ENST00000589216 RTFDC1Q9BY42 306 aaPredicted RBP12.57□□□□□ -0.4
PTPN2-208ENST00000589216 GREM2Q9H772 168 aa12.57□□□□□ -0.4
PTPN2-208ENST00000589216 PSME4Q14997 1843 aa12.57□□□□□ -0.4
PTPN2-208ENST00000589216 FZD9O00144 591 aa12.56□□□□□ -0.4
PTPN2-208ENST00000589216 PPIP5K2O43314 1243 aa12.56□□□□□ -0.4
PTPN2-208ENST00000589216 GPSM2P81274 684 aa12.56□□□□□ -0.4
PTPN2-208ENST00000589216 EPHA10Q5JZY3 1008 aa12.56□□□□□ -0.4
PTPN2-208ENST00000589216 SLC4A10Q6U841 1118 aa12.56□□□□□ -0.4
PTPN2-208ENST00000589216 LARGE2Q8N3Y3 721 aa12.56□□□□□ -0.4
PTPN2-208ENST00000589216 MPNDQ8N594 471 aa12.56□□□□□ -0.4
PTPN2-208ENST00000589216 POTEIP0CG38 1075 aa12.55□□□□□ -0.4
PTPN2-208ENST00000589216 POTEJP0CG39 1038 aa12.55□□□□□ -0.4
PTPN2-208ENST00000589216 HOXD11P31277 338 aaPredicted RBP12.55□□□□□ -0.4
PTPN2-208ENST00000589216 RPS8P62241 208 aaKnown RBP12.55□□□□□ -0.4
PTPN2-208ENST00000589216 TMC4Q7Z404 712 aa12.55□□□□□ -0.4
PTPN2-208ENST00000589216 PLA2G12BQ9BX93 195 aa12.55□□□□□ -0.4
PTPN2-208ENST00000589216 SMC4Q9NTJ3 1288 aa12.55□□□□□ -0.4
PTPN2-208ENST00000589216 WTIPA6NIX2 430 aaPredicted RBP12.54□□□□□ -0.4
PTPN2-208ENST00000589216 KIAA2012Q0VF49 1180 aa12.54□□□□□ -0.4
PTPN2-208ENST00000589216 ALDH1L2Q3SY69 923 aa12.54□□□□□ -0.4
PTPN2-208ENST00000589216 GRIPAP1Q4V328 841 aa12.54□□□□□ -0.4
PTPN2-208ENST00000589216 L3MBTL3Q96JM7 780 aaPredicted RBP12.54□□□□□ -0.4
PTPN2-208ENST00000589216 POLLQ9UGP5 575 aa12.54□□□□□ -0.4
PTPN2-208ENST00000589216 PTPRCP08575 1304 aa12.54□□□□□ -0.4
PTPN2-208ENST00000589216 YDJCA8MPS7 323 aa12.53□□□□□ -0.4
PTPN2-208ENST00000589216 GRM8O00222 908 aa12.53□□□□□ -0.4
PTPN2-208ENST00000589216 ALDH1L1O75891 902 aa12.53□□□□□ -0.4
PTPN2-208ENST00000589216 TOMM70O94826 608 aa12.53□□□□□ -0.4
PTPN2-208ENST00000589216 HSP90B1P14625 803 aaKnown RBP12.53□□□□□ -0.4
PTPN2-208ENST00000589216 FOXO4P98177 505 aa12.53□□□□□ -0.4
PTPN2-208ENST00000589216 DPY19L2Q6NUT2 758 aa12.53□□□□□ -0.4
PTPN2-208ENST00000589216 NIM1KQ8IY84 436 aa12.53□□□□□ -0.4
PTPN2-208ENST00000589216 JDP2Q8WYK2 163 aa12.53□□□□□ -0.4
PTPN2-208ENST00000589216 KAZALD1Q96I82 304 aa12.53□□□□□ -0.4
PTPN2-208ENST00000589216 SRCIN1Q9C0H9 1055 aa12.53□□□□□ -0.4
PTPN2-208ENST00000589216 NSFL1CQ9UNZ2 370 aaKnown RBP12.53□□□□□ -0.4
PTPN2-208ENST00000589216 UFL1O94874 794 aa12.52□□□□□ -0.41
PTPN2-208ENST00000589216 CSF1RP07333 972 aa12.52□□□□□ -0.41
PTPN2-208ENST00000589216 NBPF7P0C2Y1 421 aaPredicted RBP12.52□□□□□ -0.41
PTPN2-208ENST00000589216 VEGFAP15692 232 aaPredicted RBP12.52□□□□□ -0.41
PTPN2-208ENST00000589216 ITGA6P23229 1130 aa12.52□□□□□ -0.41
PTPN2-208ENST00000589216 RARSP54136 660 aaKnown RBP12.52□□□□□ -0.41
PTPN2-208ENST00000589216 ANKRD18AQ8IVF6 992 aa12.52□□□□□ -0.41
PTPN2-208ENST00000589216 SUPT20HQ8NEM7 779 aa12.52□□□□□ -0.41
PTPN2-208ENST00000589216 TBC1D16Q8TBP0 767 aa12.52□□□□□ -0.41
PTPN2-208ENST00000589216 RBM46Q8TBY0 533 aaKnown RBP12.52□□□□□ -0.41
PTPN2-208ENST00000589216 SUCLG2Q96I99 432 aa12.52□□□□□ -0.41
PTPN2-208ENST00000589216 TMX4Q9H1E5 349 aaPredicted RBP12.52□□□□□ -0.41
PTPN2-208ENST00000589216 ZBED9Q6R2W3 1325 aa12.52□□□□□ -0.41
PTPN2-208ENST00000589216 CT47B1P0C2W7 299 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms