RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 PNMA8AQ86V59 439 aaPredicted RBP24.32■■□□□ 1.48
TRIM47-205ENST00000587774 SP8Q8IXZ3 490 aa24.32■■□□□ 1.48
TRIM47-205ENST00000587774 C8orf58Q8NAV2 365 aa24.32■■□□□ 1.48
TRIM47-205ENST00000587774 RTFDC1Q9BY42 306 aaPredicted RBP24.32■■□□□ 1.48
TRIM47-205ENST00000587774 PHAXQ9H814 394 aaKnown RBP24.32■■□□□ 1.48
TRIM47-205ENST00000587774 SCNN1DP51172 638 aa24.31■■□□□ 1.48
TRIM47-205ENST00000587774 GOLGA2Q08379 1002 aa24.31■■□□□ 1.48
TRIM47-205ENST00000587774 DPP8Q6V1X1 898 aaPredicted RBP24.31■■□□□ 1.48
TRIM47-205ENST00000587774 CLEC11AQ9Y240 323 aa24.31■■□□□ 1.48
TRIM47-205ENST00000587774 ITGBL1O95965 494 aaPredicted RBP24.3■■□□□ 1.48
TRIM47-205ENST00000587774 RTL5Q5HYW3 569 aaPredicted RBP24.3■■□□□ 1.48
TRIM47-205ENST00000587774 MPNDQ8N594 471 aa24.3■■□□□ 1.48
TRIM47-205ENST00000587774 SUPT20HQ8NEM7 779 aa24.3■■□□□ 1.48
TRIM47-205ENST00000587774 VPS33BQ9H267 617 aa24.3■■□□□ 1.48
TRIM47-205ENST00000587774 LMOD1P29536 600 aaPredicted RBP24.29■■□□□ 1.48
TRIM47-205ENST00000587774 RIC3Q7Z5B4 369 aa24.29■■□□□ 1.48
TRIM47-205ENST00000587774 TRIM28Q13263 835 aaKnown RBP24.28■■□□□ 1.48
TRIM47-205ENST00000587774 MAP1SQ66K74 1059 aaPredicted RBP24.28■■□□□ 1.48
TRIM47-205ENST00000587774 MKRN1Q9UHC7 482 aaKnown RBP24.28■■□□□ 1.48
TRIM47-205ENST00000587774 SF3B3Q15393 1217 aaKnown RBP24.27■■□□□ 1.48
TRIM47-205ENST00000587774 TMC4Q7Z404 712 aa24.27■■□□□ 1.48
TRIM47-205ENST00000587774 CELF1Q92879 486 aaKnown RBP24.27■■□□□ 1.48
TRIM47-205ENST00000587774 TSR2Q969E8 191 aaKnown RBP24.27■■□□□ 1.48
TRIM47-205ENST00000587774 CNTNAP1P78357 1384 aa24.27■■□□□ 1.48
TRIM47-205ENST00000587774 THSD7BQ9C0I4 1608 aa24.26■■□□□ 1.47
TRIM47-205ENST00000587774 IRS4O14654 1257 aaPredicted RBP24.26■■□□□ 1.47
TRIM47-205ENST00000587774 ZEB1P37275 1124 aaPredicted RBP24.26■■□□□ 1.47
TRIM47-205ENST00000587774 EPS15P42566 896 aa24.26■■□□□ 1.47
TRIM47-205ENST00000587774 KIAA2012Q0VF49 1180 aa24.26■■□□□ 1.47
TRIM47-205ENST00000587774 TSPYL6Q8N831 410 aa24.26■■□□□ 1.47
TRIM47-205ENST00000587774 ZNRF3Q9ULT6 936 aa24.26■■□□□ 1.47
TRIM47-205ENST00000587774 A0A1B0GUL6 1792 aa24.26■■□□□ 1.47
TRIM47-205ENST00000587774 ZNF646O15015 1829 aaPredicted RBP24.26■■□□□ 1.47
TRIM47-205ENST00000587774 HSPA1AP0DMV8 641 aaKnown RBP24.25■■□□□ 1.47
TRIM47-205ENST00000587774 HSPA1BP0DMV9 641 aaKnown RBP24.25■■□□□ 1.47
TRIM47-205ENST00000587774 CXCL9Q07325 125 aa24.25■■□□□ 1.47
TRIM47-205ENST00000587774 CNTROBQ8N137 903 aa24.25■■□□□ 1.47
TRIM47-205ENST00000587774 MYD88Q99836 296 aa24.25■■□□□ 1.47
TRIM47-205ENST00000587774 TMEM88BA6NKF7 163 aa24.24■■□□□ 1.47
TRIM47-205ENST00000587774 CCDC27Q2M243 656 aa24.24■■□□□ 1.47
TRIM47-205ENST00000587774 CCDC30Q5VVM6 783 aa24.24■■□□□ 1.47
TRIM47-205ENST00000587774 ZBTB38Q8NAP3 1195 aaPredicted RBP24.24■■□□□ 1.47
TRIM47-205ENST00000587774 WWC1Q8IX03 1113 aa24.23■■□□□ 1.47
TRIM47-205ENST00000587774 GPRC5DQ9NZD1 345 aa24.23■■□□□ 1.47
TRIM47-205ENST00000587774 MRS2Q9HD23 443 aa24.22■■□□□ 1.47
TRIM47-205ENST00000587774 COL13A1Q5TAT6 717 aaPredicted RBP24.21■■□□□ 1.47
TRIM47-205ENST00000587774 USP50Q70EL3 339 aaPredicted RBP24.21■■□□□ 1.47
TRIM47-205ENST00000587774 CCDC191Q8NCU4 936 aa24.21■■□□□ 1.47
TRIM47-205ENST00000587774 YDJCA8MPS7 323 aa24.2■■□□□ 1.46
TRIM47-205ENST00000587774 RAD17O75943 681 aa24.2■■□□□ 1.46
TRIM47-205ENST00000587774 DDX58O95786 925 aaKnown RBP24.2■■□□□ 1.46
TRIM47-205ENST00000587774 GMPSP49915 693 aaPredicted RBP24.2■■□□□ 1.46
TRIM47-205ENST00000587774 CIAPIN1Q6FI81 312 aa24.2■■□□□ 1.46
TRIM47-205ENST00000587774 METTL22Q9BUU2 404 aaPredicted RBP24.2■■□□□ 1.46
TRIM47-205ENST00000587774 CHMP4AQ9BY43 222 aa24.2■■□□□ 1.46
TRIM47-205ENST00000587774 CWC25Q9NXE8 425 aaPredicted RBP24.2■■□□□ 1.46
TRIM47-205ENST00000587774 NSFL1CQ9UNZ2 370 aaKnown RBP24.2■■□□□ 1.46
TRIM47-205ENST00000587774 CDHR2Q9BYE9 1310 aa24.19■■□□□ 1.46
TRIM47-205ENST00000587774 PCCAP05165 728 aaPredicted RBP24.19■■□□□ 1.46
TRIM47-205ENST00000587774 ADARB2Q9NS39 739 aaKnown RBP24.19■■□□□ 1.46
TRIM47-205ENST00000587774 MAP3K2Q9Y2U5 619 aa24.19■■□□□ 1.46
TRIM47-205ENST00000587774 GPSM2P81274 684 aa24.18■■□□□ 1.46
TRIM47-205ENST00000587774 IL16Q14005 1332 aa24.17■■□□□ 1.46
TRIM47-205ENST00000587774 ZNF316A6NFI3 1004 aaPredicted RBP24.17■■□□□ 1.46
TRIM47-205ENST00000587774 ANP32CO43423 234 aa24.17■■□□□ 1.46
TRIM47-205ENST00000587774 TWISTNBQ3B726 338 aaPredicted RBP24.17■■□□□ 1.46
TRIM47-205ENST00000587774 JARID2Q92833 1246 aaPredicted RBP24.17■■□□□ 1.46
TRIM47-205ENST00000587774 SEC31BQ9NQW1 1179 aa24.17■■□□□ 1.46
TRIM47-205ENST00000587774 POLLQ9UGP5 575 aa24.17■■□□□ 1.46
TRIM47-205ENST00000587774 HSP90B1P14625 803 aaKnown RBP24.16■■□□□ 1.46
TRIM47-205ENST00000587774 RPS8P62241 208 aaKnown RBP24.16■■□□□ 1.46
TRIM47-205ENST00000587774 FMR1Q06787 632 aaKnown RBP eCLIP24.16■■□□□ 1.46
TRIM47-205ENST00000587774 TNIP1Q15025 636 aa24.16■■□□□ 1.46
TRIM47-205ENST00000587774 WASHC4Q2M389 1173 aa24.16■■□□□ 1.46
TRIM47-205ENST00000587774 STK31Q9BXU1 1019 aa24.16■■□□□ 1.46
TRIM47-205ENST00000587774 DBNDD1Q9H9R9 158 aa24.16■■□□□ 1.46
TRIM47-205ENST00000587774 PI4KAP2A4QPH2 592 aa24.15■■□□□ 1.46
TRIM47-205ENST00000587774 C6orf229H3BNL8 230 aa24.15■■□□□ 1.46
TRIM47-205ENST00000587774 PDE8AO60658 829 aa24.15■■□□□ 1.46
TRIM47-205ENST00000587774 VEGFBP49765 207 aa24.15■■□□□ 1.46
TRIM47-205ENST00000587774 KSR2Q6VAB6 950 aa24.15■■□□□ 1.46
TRIM47-205ENST00000587774 PI4KAP1Q8N8J0 262 aa24.15■■□□□ 1.46
TRIM47-205ENST00000587774 BCL2L13Q9BXK5 485 aa24.15■■□□□ 1.46
TRIM47-205ENST00000587774 FANCIQ9NVI1 1328 aa24.14■■□□□ 1.46
TRIM47-205ENST00000587774 RASSF10A6NK89 507 aa24.14■■□□□ 1.45
TRIM47-205ENST00000587774 RIMBP2O15034 1052 aa24.14■■□□□ 1.45
TRIM47-205ENST00000587774 IGKV5-2P06315 115 aa24.14■■□□□ 1.45
TRIM47-205ENST00000587774 CCDC152Q4G0S7 254 aa24.14■■□□□ 1.45
TRIM47-205ENST00000587774 GPR101Q96P66 508 aaPredicted RBP24.14■■□□□ 1.45
TRIM47-205ENST00000587774 CCDC85AQ96PX6 553 aaPredicted RBP24.14■■□□□ 1.45
TRIM47-205ENST00000587774 TRAF5O00463 557 aa24.13■■□□□ 1.45
TRIM47-205ENST00000587774 NCBP3Q53F19 620 aaKnown RBP24.13■■□□□ 1.45
TRIM47-205ENST00000587774 G2E3Q7L622 706 aa24.13■■□□□ 1.45
TRIM47-205ENST00000587774 TBC1D16Q8TBP0 767 aa24.13■■□□□ 1.45
TRIM47-205ENST00000587774 SHTN1A0MZ66 631 aa24.12■■□□□ 1.45
TRIM47-205ENST00000587774 ABT1Q9ULW3 272 aaKnown RBP24.12■■□□□ 1.45
TRIM47-205ENST00000587774 PSMD14O00487 310 aa24.11■■□□□ 1.45
TRIM47-205ENST00000587774 ECE2O60344 883 aa24.11■■□□□ 1.45
TRIM47-205ENST00000587774 CWF19L2Q2TBE0 894 aaKnown RBP24.11■■□□□ 1.45
TRIM47-205ENST00000587774 TRPM4Q8TD43 1214 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms