RNA–Protein interactions for RNA: ENST00000587173.5

VAT1-205, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-205ENST00000587173 CFAP44Q96MT7 982 aa20.43■□□□□ 0.86
VAT1-205ENST00000587173 DBF4Q9UBU7 674 aaPredicted RBP20.43■□□□□ 0.86
VAT1-205ENST00000587173 CXCL9Q07325 125 aa20.42■□□□□ 0.86
VAT1-205ENST00000587173 KIAA2012Q0VF49 1180 aa20.42■□□□□ 0.86
VAT1-205ENST00000587173 DUSP27Q5VZP5 1158 aa20.42■□□□□ 0.86
VAT1-205ENST00000587173 ANKRD13DQ6ZTN6 518 aa20.42■□□□□ 0.86
VAT1-205ENST00000587173 GPRC5DQ9NZD1 345 aa20.42■□□□□ 0.86
VAT1-205ENST00000587173 ATP5J2-PTCD1G3V325 749 aa20.41■□□□□ 0.86
VAT1-205ENST00000587173 FMR1Q06787 632 aaKnown RBP eCLIP20.41■□□□□ 0.869e-9■□□□□ 10.5
VAT1-205ENST00000587173 ISCA1Q9BUE6 129 aa20.41■□□□□ 0.86
VAT1-205ENST00000587173 ADARB2Q9NS39 739 aaKnown RBP20.41■□□□□ 0.86
VAT1-205ENST00000587173 GMPSP49915 693 aaPredicted RBP20.4■□□□□ 0.86
VAT1-205ENST00000587173 CIAPIN1Q6FI81 312 aa20.4■□□□□ 0.86
VAT1-205ENST00000587173 PRKRIP1Q9H875 184 aaPredicted RBP20.4■□□□□ 0.86
VAT1-205ENST00000587173 MBIPQ9NS73 344 aa20.4■□□□□ 0.86
VAT1-205ENST00000587173 HYPKQ9NX55 129 aa20.4■□□□□ 0.86
VAT1-205ENST00000587173 LAMB2P55268 1798 aa20.39■□□□□ 0.86
VAT1-205ENST00000587173 CTCFP49711 727 aaPredicted RBP20.39■□□□□ 0.85
VAT1-205ENST00000587173 TMC4Q7Z404 712 aa20.39■□□□□ 0.85
VAT1-205ENST00000587173 FAM89AQ96GI7 184 aa20.39■□□□□ 0.85
VAT1-205ENST00000587173 WBP1LQ9NX94 342 aa20.39■□□□□ 0.85
VAT1-205ENST00000587173 WDR33Q9C0J8 1336 aaKnown RBP20.38■□□□□ 0.85
VAT1-205ENST00000587173 TRAF5O00463 557 aa20.38■□□□□ 0.85
VAT1-205ENST00000587173 RAD17O75943 681 aa20.38■□□□□ 0.85
VAT1-205ENST00000587173 PRDM10Q9NQV6 1147 aa20.38■□□□□ 0.85
VAT1-205ENST00000587173 TNIP1Q15025 636 aa20.37■□□□□ 0.85
VAT1-205ENST00000587173 SF3B3Q15393 1217 aaKnown RBP20.37■□□□□ 0.85
VAT1-205ENST00000587173 RTL5Q5HYW3 569 aaPredicted RBP20.37■□□□□ 0.85
VAT1-205ENST00000587173 CELF1Q92879 486 aaKnown RBP20.37■□□□□ 0.85
VAT1-205ENST00000587173 BCL2L13Q9BXK5 485 aa20.37■□□□□ 0.85
VAT1-205ENST00000587173 ZNF853P0CG23 659 aa20.36■□□□□ 0.85
VAT1-205ENST00000587173 CALD1Q05682 793 aaKnown RBP20.36■□□□□ 0.85
VAT1-205ENST00000587173 PAXIP1Q6ZW49 1069 aaPredicted RBP20.36■□□□□ 0.85
VAT1-205ENST00000587173 CDHR2Q9BYE9 1310 aa20.35■□□□□ 0.85
VAT1-205ENST00000587173 DUOX1Q9NRD9 1551 aa20.35■□□□□ 0.85
VAT1-205ENST00000587173 YDJCA8MPS7 323 aa20.35■□□□□ 0.85
VAT1-205ENST00000587173 APAF1O14727 1248 aa20.35■□□□□ 0.85
VAT1-205ENST00000587173 GOLGA2Q08379 1002 aa20.35■□□□□ 0.85
VAT1-205ENST00000587173 TRIM28Q13263 835 aaKnown RBP20.35■□□□□ 0.85
VAT1-205ENST00000587173 CST9Q5W186 159 aa20.35■□□□□ 0.85
VAT1-205ENST00000587173 RIC3Q7Z5B4 369 aa20.35■□□□□ 0.85
VAT1-205ENST00000587173 IFT57Q9NWB7 429 aa20.35■□□□□ 0.85
VAT1-205ENST00000587173 IRS4O14654 1257 aaPredicted RBP20.34■□□□□ 0.85
VAT1-205ENST00000587173 MAP2K1Q02750 393 aaPredicted RBP20.34■□□□□ 0.85
VAT1-205ENST00000587173 CAPNS2Q96L46 248 aa20.34■□□□□ 0.85
VAT1-205ENST00000587173 NSFL1CQ9UNZ2 370 aaKnown RBP20.34■□□□□ 0.85
VAT1-205ENST00000587173 DDX60Q8IY21 1712 aaKnown RBP20.33■□□□□ 0.85
VAT1-205ENST00000587173 ECE1P42892 770 aa20.33■□□□□ 0.85
VAT1-205ENST00000587173 LBX1P52954 281 aa20.33■□□□□ 0.85
VAT1-205ENST00000587173 GNAI1P63096 354 aa20.33■□□□□ 0.85
VAT1-205ENST00000587173 WASHC4Q2M389 1173 aa20.33■□□□□ 0.85
VAT1-205ENST00000587173 TRPM4Q8TD43 1214 aa20.33■□□□□ 0.85
VAT1-205ENST00000587173 GLIS2Q9BZE0 524 aaPredicted RBP20.33■□□□□ 0.85
VAT1-205ENST00000587173 PHAXQ9H814 394 aaKnown RBP20.33■□□□□ 0.85
VAT1-205ENST00000587173 TLL2Q9Y6L7 1015 aa20.33■□□□□ 0.85
VAT1-205ENST00000587173 ELL2O00472 640 aaPredicted RBP20.32■□□□□ 0.84
VAT1-205ENST00000587173 GPSM2P81274 684 aa20.32■□□□□ 0.84
VAT1-205ENST00000587173 GRM1Q13255 1194 aa20.32■□□□□ 0.84
VAT1-205ENST00000587173 CYP4F22Q6NT55 531 aa20.32■□□□□ 0.84
VAT1-205ENST00000587173 CNOT7Q9UIV1 285 aaKnown RBP20.32■□□□□ 0.84
VAT1-205ENST00000587173 LRRC37AA6NMS7 1700 aa20.32■□□□□ 0.84
VAT1-205ENST00000587173 SHTN1A0MZ66 631 aa20.31■□□□□ 0.84
VAT1-205ENST00000587173 C6orf229H3BNL8 230 aa20.31■□□□□ 0.84
VAT1-205ENST00000587173 RIMBP2O15034 1052 aa20.31■□□□□ 0.84
VAT1-205ENST00000587173 CELF2O95319 508 aaKnown RBP20.31■□□□□ 0.84
VAT1-205ENST00000587173 HSPA8P11142 646 aaKnown RBP20.31■□□□□ 0.84
VAT1-205ENST00000587173 HIRAP54198 1017 aaPredicted RBP20.31■□□□□ 0.84
VAT1-205ENST00000587173 ZBTB38Q8NAP3 1195 aaPredicted RBP20.31■□□□□ 0.84
VAT1-205ENST00000587173 MYD88Q99836 296 aa20.31■□□□□ 0.84
VAT1-205ENST00000587173 DBNDD1Q9H9R9 158 aa20.31■□□□□ 0.84
VAT1-205ENST00000587173 POLLQ9UGP5 575 aa20.31■□□□□ 0.84
VAT1-205ENST00000587173 PGAP2Q9UHJ9 254 aa20.31■□□□□ 0.84
VAT1-205ENST00000587173 COL4A1P02462 1669 aa20.3■□□□□ 0.84
VAT1-205ENST00000587173 H7C1D1 291 aa20.3■□□□□ 0.84
VAT1-205ENST00000587173 MICALL2Q8IY33 904 aa20.3■□□□□ 0.84
VAT1-205ENST00000587173 ZC3H15Q8WU90 426 aaKnown RBP20.3■□□□□ 0.84
VAT1-205ENST00000587173 CHMP4AQ9BY43 222 aa20.3■□□□□ 0.84
VAT1-205ENST00000587173 ZBTB12Q9Y330 459 aaPredicted RBP20.3■□□□□ 0.84
VAT1-205ENST00000587173 TAF1P21675 1872 aa20.3■□□□□ 0.84
VAT1-205ENST00000587173 PSMD14O00487 310 aa20.29■□□□□ 0.84
VAT1-205ENST00000587173 RPS8P62241 208 aaKnown RBP20.29■□□□□ 0.84
VAT1-205ENST00000587173 C8orf58Q8NAV2 365 aa20.29■□□□□ 0.84
VAT1-205ENST00000587173 GPR101Q96P66 508 aaPredicted RBP20.29■□□□□ 0.84
VAT1-205ENST00000587173 EYA3Q99504 573 aa20.29■□□□□ 0.84
VAT1-205ENST00000587173 HSP90B1P14625 803 aaKnown RBP20.28■□□□□ 0.84
VAT1-205ENST00000587173 ZNF408Q9H9D4 720 aa20.28■□□□□ 0.84
VAT1-205ENST00000587173 ECE2O60344 883 aa20.27■□□□□ 0.84
VAT1-205ENST00000587173 DOK7Q18PE1 504 aa20.27■□□□□ 0.84
VAT1-205ENST00000587173 CDC37L1Q7L3B6 337 aa20.27■□□□□ 0.84
VAT1-205ENST00000587173 SAPCD2Q86UD0 394 aa20.27■□□□□ 0.84
VAT1-205ENST00000587173 TBC1D16Q8TBP0 767 aa20.27■□□□□ 0.84
VAT1-205ENST00000587173 DPF2Q92785 391 aa20.27■□□□□ 0.84
VAT1-205ENST00000587173 BEGAINQ9BUH8 593 aa20.27■□□□□ 0.84
VAT1-205ENST00000587173 SEC31BQ9NQW1 1179 aa20.27■□□□□ 0.84
VAT1-205ENST00000587173 THSD7BQ9C0I4 1608 aa20.27■□□□□ 0.83
VAT1-205ENST00000587173 PCCAP05165 728 aaPredicted RBP20.26■□□□□ 0.83
VAT1-205ENST00000587173 SAMD7Q7Z3H4 446 aa20.26■□□□□ 0.83
VAT1-205ENST00000587173 CCDC191Q8NCU4 936 aa20.26■□□□□ 0.83
VAT1-205ENST00000587173 TRPM7Q96QT4 1865 aa20.26■□□□□ 0.83
VAT1-205ENST00000587173 RTL9Q8NET4 1388 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms