RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 G2E3Q7L622 706 aa20.43■□□□□ 0.86
ATG4D-205ENST00000586477 PPEF1O14829 653 aaPredicted RBP20.42■□□□□ 0.86
ATG4D-205ENST00000586477 RIC3Q7Z5B4 369 aa20.42■□□□□ 0.86
ATG4D-205ENST00000586477 PSMD1Q99460 953 aa20.42■□□□□ 0.86
ATG4D-205ENST00000586477 BCL2L13Q9BXK5 485 aa20.42■□□□□ 0.86
ATG4D-205ENST00000586477 API5Q9BZZ5 524 aaKnown RBP20.42■□□□□ 0.86
ATG4D-205ENST00000586477 FKBP5Q13451 457 aaPredicted RBP20.41■□□□□ 0.86
ATG4D-205ENST00000586477 MYD88Q99836 296 aa20.41■□□□□ 0.86
ATG4D-205ENST00000586477 LRRC37AA6NMS7 1700 aa20.4■□□□□ 0.86
ATG4D-205ENST00000586477 IARSP41252 1262 aaKnown RBP20.4■□□□□ 0.86
ATG4D-205ENST00000586477 FSTL1Q12841 308 aa20.4■□□□□ 0.86
ATG4D-205ENST00000586477 RTL5Q5HYW3 569 aaPredicted RBP20.4■□□□□ 0.86
ATG4D-205ENST00000586477 ZKSCAN2Q63HK3 967 aa20.4■□□□□ 0.86
ATG4D-205ENST00000586477 CC2D2BQ6DHV5 1058 aa20.4■□□□□ 0.86
ATG4D-205ENST00000586477 METTL22Q9BUU2 404 aaPredicted RBP20.4■□□□□ 0.86
ATG4D-205ENST00000586477 ZNF541Q9H0D2 1346 aa20.4■□□□□ 0.86
ATG4D-205ENST00000586477 BCAR3O75815 825 aa20.39■□□□□ 0.85
ATG4D-205ENST00000586477 DDNO94850 711 aaPredicted RBP20.39■□□□□ 0.85
ATG4D-205ENST00000586477 ATP6V0A2Q9Y487 856 aa20.39■□□□□ 0.85
ATG4D-205ENST00000586477 VEGFAP15692 232 aaPredicted RBP20.38■□□□□ 0.85
ATG4D-205ENST00000586477 SF3B3Q15393 1217 aaKnown RBP20.38■□□□□ 0.85
ATG4D-205ENST00000586477 DPY19L2Q6NUT2 758 aa20.38■□□□□ 0.85
ATG4D-205ENST00000586477 FRAT1Q92837 279 aaPredicted RBP20.38■□□□□ 0.85
ATG4D-205ENST00000586477 MAP3K2Q9Y2U5 619 aa20.38■□□□□ 0.85
ATG4D-205ENST00000586477 DUOX1Q9NRD9 1551 aa20.38■□□□□ 0.85
ATG4D-205ENST00000586477 PI4KAP2A4QPH2 592 aa20.37■□□□□ 0.85
ATG4D-205ENST00000586477 IGKV5-2P06315 115 aa20.37■□□□□ 0.85
ATG4D-205ENST00000586477 GRAPQ13588 217 aa20.37■□□□□ 0.85
ATG4D-205ENST00000586477 KSR2Q6VAB6 950 aa20.37■□□□□ 0.85
ATG4D-205ENST00000586477 ATF7IPQ6VMQ6 1270 aa20.37■□□□□ 0.85
ATG4D-205ENST00000586477 PI4KAP1Q8N8J0 262 aa20.37■□□□□ 0.85
ATG4D-205ENST00000586477 GRAPLQ8TC17 118 aaPredicted RBP20.37■□□□□ 0.85
ATG4D-205ENST00000586477 JARID2Q92833 1246 aaPredicted RBP20.37■□□□□ 0.85
ATG4D-205ENST00000586477 NOB1Q9ULX3 412 aaKnown RBP20.37■□□□□ 0.85
ATG4D-205ENST00000586477 FZD9O00144 591 aa20.36■□□□□ 0.85
ATG4D-205ENST00000586477 IRS4O14654 1257 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-205ENST00000586477 BBOX1O75936 387 aa20.36■□□□□ 0.85
ATG4D-205ENST00000586477 NEXNQ0ZGT2 675 aa20.36■□□□□ 0.85
ATG4D-205ENST00000586477 ZBTB38Q8NAP3 1195 aaPredicted RBP20.36■□□□□ 0.85
ATG4D-205ENST00000586477 CCDC191Q8NCU4 936 aa20.36■□□□□ 0.85
ATG4D-205ENST00000586477 DDX46Q7L014 1031 aaKnown RBP20.35■□□□□ 0.85
ATG4D-205ENST00000586477 SP8Q8IXZ3 490 aa20.35■□□□□ 0.85
ATG4D-205ENST00000586477 FTSJ3Q8IY81 847 aaKnown RBP20.35■□□□□ 0.85
ATG4D-205ENST00000586477 SMC1BQ8NDV3 1235 aa20.35■□□□□ 0.85
ATG4D-205ENST00000586477 CELF1Q92879 486 aaKnown RBP20.35■□□□□ 0.85
ATG4D-205ENST00000586477 LTBP1Q14766 1721 aa20.35■□□□□ 0.85
ATG4D-205ENST00000586477 SCN4AP35499 1836 aa20.34■□□□□ 0.85
ATG4D-205ENST00000586477 PCCAP05165 728 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-205ENST00000586477 GRIPAP1Q4V328 841 aa20.34■□□□□ 0.85
ATG4D-205ENST00000586477 DNAAF4Q8WXU2 420 aa20.34■□□□□ 0.85
ATG4D-205ENST00000586477 L3MBTL3Q96JM7 780 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-205ENST00000586477 RTFDC1Q9BY42 306 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-205ENST00000586477 CWC25Q9NXE8 425 aaPredicted RBP20.34■□□□□ 0.85
ATG4D-205ENST00000586477 RRP1P56182 461 aaKnown RBP20.33■□□□□ 0.85
ATG4D-205ENST00000586477 MYH3P11055 1940 aa20.32■□□□□ 0.84
ATG4D-205ENST00000586477 POTEIP0CG38 1075 aa20.32■□□□□ 0.84
ATG4D-205ENST00000586477 POTEJP0CG39 1038 aa20.32■□□□□ 0.84
ATG4D-205ENST00000586477 PDE3AQ14432 1141 aa20.32■□□□□ 0.84
ATG4D-205ENST00000586477 CWF19L2Q2TBE0 894 aaKnown RBP20.32■□□□□ 0.84
ATG4D-205ENST00000586477 DNAJC5GQ8N7S2 189 aa20.32■□□□□ 0.84
ATG4D-205ENST00000586477 NEURL1BA8MQ27 555 aa20.31■□□□□ 0.84
ATG4D-205ENST00000586477 TRIM27P14373 513 aa20.31■□□□□ 0.84
ATG4D-205ENST00000586477 CCT4P50991 539 aaKnown RBP20.31■□□□□ 0.84
ATG4D-205ENST00000586477 SEC31BQ9NQW1 1179 aa20.31■□□□□ 0.84
ATG4D-205ENST00000586477 AOC3Q16853 763 aa20.3■□□□□ 0.84
ATG4D-205ENST00000586477 DZIP1LQ8IYY4 767 aaKnown RBP20.3■□□□□ 0.84
ATG4D-205ENST00000586477 CHMP4BQ9H444 224 aaKnown RBP20.3■□□□□ 0.84
ATG4D-205ENST00000586477 ADAMTSL1Q8N6G6 1762 aa20.3■□□□□ 0.84
ATG4D-205ENST00000586477 CDHR2Q9BYE9 1310 aa20.29■□□□□ 0.84
ATG4D-205ENST00000586477 PDE8AO60658 829 aa20.29■□□□□ 0.84
ATG4D-205ENST00000586477 HTRA3P83110 453 aa20.29■□□□□ 0.84
ATG4D-205ENST00000586477 DPP8Q6V1X1 898 aaPredicted RBP20.29■□□□□ 0.84
ATG4D-205ENST00000586477 LARGE2Q8N3Y3 721 aa20.29■□□□□ 0.84
ATG4D-205ENST00000586477 MPNDQ8N594 471 aa20.29■□□□□ 0.84
ATG4D-205ENST00000586477 LINS1Q8NG48 757 aa20.29■□□□□ 0.84
ATG4D-205ENST00000586477 SUPT16HQ9Y5B9 1047 aaKnown RBP20.29■□□□□ 0.84
ATG4D-205ENST00000586477 PPIP5K2O43314 1243 aa20.28■□□□□ 0.84
ATG4D-205ENST00000586477 SLC4A10Q6U841 1118 aa20.28■□□□□ 0.84
ATG4D-205ENST00000586477 JDP2Q8WYK2 163 aa20.28■□□□□ 0.84
ATG4D-205ENST00000586477 TAF1DQ9H5J8 278 aaPredicted RBP20.28■□□□□ 0.84
ATG4D-205ENST00000586477 H7C1W4 665 aa20.27■□□□□ 0.84
ATG4D-205ENST00000586477 ALDH1L1O75891 902 aa20.27■□□□□ 0.84
ATG4D-205ENST00000586477 CASP7P55210 303 aa20.27■□□□□ 0.84
ATG4D-205ENST00000586477 TMC4Q7Z404 712 aa20.27■□□□□ 0.84
ATG4D-205ENST00000586477 GPC2Q8N158 579 aa20.27■□□□□ 0.84
ATG4D-205ENST00000586477 SRCIN1Q9C0H9 1055 aa20.27■□□□□ 0.84
ATG4D-205ENST00000586477 SPEF2Q9C093 1822 aa20.27■□□□□ 0.84
ATG4D-205ENST00000586477 F6X3S4 739 aa20.26■□□□□ 0.83
ATG4D-205ENST00000586477 RPS8P62241 208 aaKnown RBP20.26■□□□□ 0.83
ATG4D-205ENST00000586477 GPSM2P81274 684 aa20.26■□□□□ 0.83
ATG4D-205ENST00000586477 KIAA2012Q0VF49 1180 aa20.26■□□□□ 0.83
ATG4D-205ENST00000586477 CCDC85AQ96PX6 553 aaPredicted RBP20.26■□□□□ 0.83
ATG4D-205ENST00000586477 VPS33BQ9H267 617 aa20.26■□□□□ 0.83
ATG4D-205ENST00000586477 GCKRQ14397 625 aa20.25■□□□□ 0.83
ATG4D-205ENST00000586477 INTS3Q68E01 1043 aaKnown RBP20.25■□□□□ 0.83
ATG4D-205ENST00000586477 NIM1KQ8IY84 436 aa20.25■□□□□ 0.83
ATG4D-205ENST00000586477 SUPT20HQ8NEM7 779 aa20.25■□□□□ 0.83
ATG4D-205ENST00000586477 KLRG1Q96E93 195 aa20.25■□□□□ 0.83
ATG4D-205ENST00000586477 POLLQ9UGP5 575 aa20.25■□□□□ 0.83
ATG4D-205ENST00000586477 HDAC5Q9UQL6 1122 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms