RNA–Protein interactions for RNA: ENST00000586368.1

PALM3-202, Transcript of paralemmin 3, humanhuman

TSL 3

Gene PALM3, Length 469 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3-202ENST00000586368 SCNN1DP51172 638 aa13.02□□□□□ -0.33
PALM3-202ENST00000586368 CALD1Q05682 793 aaKnown RBP13.02□□□□□ -0.33
PALM3-202ENST00000586368 RIC3Q7Z5B4 369 aa13.02□□□□□ -0.33
PALM3-202ENST00000586368 ISCA1Q9BUE6 129 aa13.02□□□□□ -0.33
PALM3-202ENST00000586368 ZNRF3Q9ULT6 936 aa13.02□□□□□ -0.33
PALM3-202ENST00000586368 ZNF853P0CG23 659 aa13.01□□□□□ -0.33
PALM3-202ENST00000586368 CXCL9Q07325 125 aa13.01□□□□□ -0.33
PALM3-202ENST00000586368 GOLGA2Q08379 1002 aa13.01□□□□□ -0.33
PALM3-202ENST00000586368 RTFDC1Q9BY42 306 aaPredicted RBP13.01□□□□□ -0.33
PALM3-202ENST00000586368 VPS33BQ9H267 617 aa13.01□□□□□ -0.33
PALM3-202ENST00000586368 PHAXQ9H814 394 aaKnown RBP13.01□□□□□ -0.33
PALM3-202ENST00000586368 CNTNAP1P78357 1384 aa13.01□□□□□ -0.33
PALM3-202ENST00000586368 LTBP1Q14766 1721 aa13□□□□□ -0.33
PALM3-202ENST00000586368 VEGFBP49765 207 aa13□□□□□ -0.33
PALM3-202ENST00000586368 TNS4Q8IZW8 715 aa13□□□□□ -0.33
PALM3-202ENST00000586368 C8orf58Q8NAV2 365 aa13□□□□□ -0.33
PALM3-202ENST00000586368 ABT1Q9ULW3 272 aaKnown RBP13□□□□□ -0.33
PALM3-202ENST00000586368 ADAMTSL1Q8N6G6 1762 aa12.99□□□□□ -0.33
PALM3-202ENST00000586368 IRS4O14654 1257 aaPredicted RBP12.99□□□□□ -0.33
PALM3-202ENST00000586368 CAPN15O75808 1086 aa12.99□□□□□ -0.33
PALM3-202ENST00000586368 RAD17O75943 681 aa12.99□□□□□ -0.33
PALM3-202ENST00000586368 GMPSP49915 693 aaPredicted RBP12.99□□□□□ -0.33
PALM3-202ENST00000586368 KIAA2012Q0VF49 1180 aa12.99□□□□□ -0.33
PALM3-202ENST00000586368 CIAPIN1Q6FI81 312 aa12.99□□□□□ -0.33
PALM3-202ENST00000586368 USP50Q70EL3 339 aaPredicted RBP12.99□□□□□ -0.33
PALM3-202ENST00000586368 CELF1Q92879 486 aaKnown RBP12.99□□□□□ -0.33
PALM3-202ENST00000586368 MYD88Q99836 296 aa12.99□□□□□ -0.33
PALM3-202ENST00000586368 BCL2L13Q9BXK5 485 aa12.99□□□□□ -0.33
PALM3-202ENST00000586368 NSFL1CQ9UNZ2 370 aaKnown RBP12.99□□□□□ -0.33
PALM3-202ENST00000586368 DDX60Q8IY21 1712 aaKnown RBP12.99□□□□□ -0.33
PALM3-202ENST00000586368 RIMBP2O15034 1052 aa12.98□□□□□ -0.33
PALM3-202ENST00000586368 FMR1Q06787 632 aaKnown RBP eCLIP12.98□□□□□ -0.33
PALM3-202ENST00000586368 SF3B3Q15393 1217 aaKnown RBP12.98□□□□□ -0.33
PALM3-202ENST00000586368 CCDC184Q52MB2 194 aa12.98□□□□□ -0.33
PALM3-202ENST00000586368 TMC4Q7Z404 712 aa12.98□□□□□ -0.33
PALM3-202ENST00000586368 ADARB2Q9NS39 739 aaKnown RBP12.98□□□□□ -0.33
PALM3-202ENST00000586368 GPRC5DQ9NZD1 345 aa12.98□□□□□ -0.33
PALM3-202ENST00000586368 C6orf229H3BNL8 230 aa12.97□□□□□ -0.33
PALM3-202ENST00000586368 TRAF5O00463 557 aa12.97□□□□□ -0.33
PALM3-202ENST00000586368 TRIM28Q13263 835 aaKnown RBP12.97□□□□□ -0.33
PALM3-202ENST00000586368 TNIP1Q15025 636 aa12.97□□□□□ -0.33
PALM3-202ENST00000586368 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
PALM3-202ENST00000586368 DEFB115Q30KQ5 88 aa12.97□□□□□ -0.33
PALM3-202ENST00000586368 JARID2Q92833 1246 aaPredicted RBP12.97□□□□□ -0.33
PALM3-202ENST00000586368 TSR2Q969E8 191 aaKnown RBP12.97□□□□□ -0.33
PALM3-202ENST00000586368 YDJCA8MPS7 323 aa12.96□□□□□ -0.33
PALM3-202ENST00000586368 GPSM2P81274 684 aa12.96□□□□□ -0.33
PALM3-202ENST00000586368 CCDC30Q5VVM6 783 aa12.96□□□□□ -0.33
PALM3-202ENST00000586368 PAXIP1Q6ZW49 1069 aaPredicted RBP12.96□□□□□ -0.33
PALM3-202ENST00000586368 TSPYL6Q8N831 410 aa12.96□□□□□ -0.33
PALM3-202ENST00000586368 ZBTB38Q8NAP3 1195 aaPredicted RBP12.96□□□□□ -0.33
PALM3-202ENST00000586368 AIDAQ96BJ3 306 aa12.96□□□□□ -0.33
PALM3-202ENST00000586368 CCDC85AQ96PX6 553 aaPredicted RBP12.96□□□□□ -0.33
PALM3-202ENST00000586368 FOXN1O15353 648 aa12.95□□□□□ -0.34
PALM3-202ENST00000586368 DDX58O95786 925 aaKnown RBP12.95□□□□□ -0.34
PALM3-202ENST00000586368 HSP90B1P14625 803 aaKnown RBP12.95□□□□□ -0.34
PALM3-202ENST00000586368 RPS8P62241 208 aaKnown RBP12.95□□□□□ -0.34
PALM3-202ENST00000586368 GRM1Q13255 1194 aa12.95□□□□□ -0.34
PALM3-202ENST00000586368 GPR101Q96P66 508 aaPredicted RBP12.95□□□□□ -0.34
PALM3-202ENST00000586368 DBNDD1Q9H9R9 158 aa12.95□□□□□ -0.34
PALM3-202ENST00000586368 SEC31BQ9NQW1 1179 aa12.95□□□□□ -0.34
PALM3-202ENST00000586368 CWC25Q9NXE8 425 aaPredicted RBP12.95□□□□□ -0.34
PALM3-202ENST00000586368 POLLQ9UGP5 575 aa12.95□□□□□ -0.34
PALM3-202ENST00000586368 COL4A1P02462 1669 aa12.94□□□□□ -0.34
PALM3-202ENST00000586368 SHTN1A0MZ66 631 aa12.94□□□□□ -0.34
PALM3-202ENST00000586368 RASSF10A6NK89 507 aa12.94□□□□□ -0.34
PALM3-202ENST00000586368 DOK7Q18PE1 504 aa12.94□□□□□ -0.34
PALM3-202ENST00000586368 CCDC191Q8NCU4 936 aa12.94□□□□□ -0.34
PALM3-202ENST00000586368 CHMP4AQ9BY43 222 aa12.94□□□□□ -0.34
PALM3-202ENST00000586368 ANKIB1Q9P2G1 1089 aa12.94□□□□□ -0.34
PALM3-202ENST00000586368 CNOT7Q9UIV1 285 aaKnown RBP12.94□□□□□ -0.34
PALM3-202ENST00000586368 MAP3K2Q9Y2U5 619 aa12.94□□□□□ -0.34
PALM3-202ENST00000586368 ZBTB12Q9Y330 459 aaPredicted RBP12.94□□□□□ -0.34
PALM3-202ENST00000586368 DUOX1Q9NRD9 1551 aa12.94□□□□□ -0.34
PALM3-202ENST00000586368 WDR33Q9C0J8 1336 aaKnown RBP12.93□□□□□ -0.34
PALM3-202ENST00000586368 H7C1D1 291 aa12.93□□□□□ -0.34
PALM3-202ENST00000586368 PSMD14O00487 310 aa12.93□□□□□ -0.34
PALM3-202ENST00000586368 ECE2O60344 883 aa12.93□□□□□ -0.34
PALM3-202ENST00000586368 PCCAP05165 728 aaPredicted RBP12.93□□□□□ -0.34
PALM3-202ENST00000586368 CCDC152Q4G0S7 254 aa12.93□□□□□ -0.34
PALM3-202ENST00000586368 CST9Q5W186 159 aa12.93□□□□□ -0.34
PALM3-202ENST00000586368 MICALL2Q8IY33 904 aa12.93□□□□□ -0.34
PALM3-202ENST00000586368 TBC1D16Q8TBP0 767 aa12.93□□□□□ -0.34
PALM3-202ENST00000586368 TRPM4Q8TD43 1214 aa12.93□□□□□ -0.34
PALM3-202ENST00000586368 EYA3Q99504 573 aa12.93□□□□□ -0.34
PALM3-202ENST00000586368 METTL22Q9BUU2 404 aaPredicted RBP12.93□□□□□ -0.34
PALM3-202ENST00000586368 STK31Q9BXU1 1019 aa12.93□□□□□ -0.34
PALM3-202ENST00000586368 GLIS2Q9BZE0 524 aaPredicted RBP12.93□□□□□ -0.34
PALM3-202ENST00000586368 LRRC37AA6NMS7 1700 aa12.93□□□□□ -0.34
PALM3-202ENST00000586368 PI4KAP2A4QPH2 592 aa12.92□□□□□ -0.34
PALM3-202ENST00000586368 G3V3G9 751 aa12.92□□□□□ -0.34
PALM3-202ENST00000586368 PDE8AO60658 829 aa12.92□□□□□ -0.34
PALM3-202ENST00000586368 UFL1O94874 794 aa12.92□□□□□ -0.34
PALM3-202ENST00000586368 CELF2O95319 508 aaKnown RBP12.92□□□□□ -0.34
PALM3-202ENST00000586368 CTCFP49711 727 aaPredicted RBP12.92□□□□□ -0.34
PALM3-202ENST00000586368 HIRAP54198 1017 aaPredicted RBP12.92□□□□□ -0.34
PALM3-202ENST00000586368 DCAF8Q5TAQ9 597 aa12.92□□□□□ -0.34
PALM3-202ENST00000586368 WWC1Q8IX03 1113 aa12.92□□□□□ -0.34
PALM3-202ENST00000586368 PI4KAP1Q8N8J0 262 aa12.92□□□□□ -0.34
PALM3-202ENST00000586368 ZNF408Q9H9D4 720 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms