RNA–Protein interactions for RNA: ENST00000585903.1

MBD3-203, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 415 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-203ENST00000585903 KIAA2012Q0VF49 1180 aa13.78□□□□□ -0.2
MBD3-203ENST00000585903 GRAPQ13588 217 aa13.78□□□□□ -0.2
MBD3-203ENST00000585903 DDX46Q7L014 1031 aaKnown RBP13.78□□□□□ -0.2
MBD3-203ENST00000585903 GRAPLQ8TC17 118 aaPredicted RBP13.78□□□□□ -0.2
MBD3-203ENST00000585903 TRMT112Q9UI30 125 aaKnown RBP13.78□□□□□ -0.2
MBD3-203ENST00000585903 ZNRF3Q9ULT6 936 aa13.78□□□□□ -0.2
MBD3-203ENST00000585903 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
MBD3-203ENST00000585903 HSP90B1P14625 803 aaKnown RBP13.77□□□□□ -0.21
MBD3-203ENST00000585903 HDGFL1Q5TGJ6 251 aa13.77□□□□□ -0.21
MBD3-203ENST00000585903 DPP8Q6V1X1 898 aaPredicted RBP13.77□□□□□ -0.21
MBD3-203ENST00000585903 ANKRD13DQ6ZTN6 518 aa13.77□□□□□ -0.21
MBD3-203ENST00000585903 GPRC5DQ9NZD1 345 aa13.77□□□□□ -0.21
MBD3-203ENST00000585903 ZNF853P0CG23 659 aa13.76□□□□□ -0.21
MBD3-203ENST00000585903 SF3B3Q15393 1217 aaKnown RBP13.76□□□□□ -0.21
MBD3-203ENST00000585903 MAP1SQ66K74 1059 aaPredicted RBP13.76□□□□□ -0.21
MBD3-203ENST00000585903 MPNDQ8N594 471 aa13.76□□□□□ -0.21
MBD3-203ENST00000585903 ZC3H15Q8WU90 426 aaKnown RBP13.76□□□□□ -0.21
MBD3-203ENST00000585903 ISCA1Q9BUE6 129 aa13.76□□□□□ -0.21
MBD3-203ENST00000585903 ADARB2Q9NS39 739 aaKnown RBP13.76□□□□□ -0.21
MBD3-203ENST00000585903 CHPF2Q9P2E5 772 aa13.76□□□□□ -0.21
MBD3-203ENST00000585903 PGAP2Q9UHJ9 254 aa13.76□□□□□ -0.21
MBD3-203ENST00000585903 ADAMTS8Q9UP79 889 aa13.76□□□□□ -0.21
MBD3-203ENST00000585903 GJA3Q9Y6H8 435 aa13.76□□□□□ -0.21
MBD3-203ENST00000585903 ANXA1P04083 346 aa13.75□□□□□ -0.21
MBD3-203ENST00000585903 AIMP1Q12904 312 aaKnown RBP13.75□□□□□ -0.21
MBD3-203ENST00000585903 TNIP1Q15025 636 aa13.75□□□□□ -0.21
MBD3-203ENST00000585903 AOC3Q16853 763 aa13.75□□□□□ -0.21
MBD3-203ENST00000585903 DEFB115Q30KQ5 88 aa13.75□□□□□ -0.21
MBD3-203ENST00000585903 CCDC146Q8IYE0 955 aa13.75□□□□□ -0.21
MBD3-203ENST00000585903 PRKRIP1Q9H875 184 aaPredicted RBP13.75□□□□□ -0.21
MBD3-203ENST00000585903 IFT57Q9NWB7 429 aa13.75□□□□□ -0.21
MBD3-203ENST00000585903 DUOX1Q9NRD9 1551 aa13.75□□□□□ -0.21
MBD3-203ENST00000585903 HCLS1P14317 486 aaPredicted RBP13.74□□□□□ -0.21
MBD3-203ENST00000585903 EPS15P42566 896 aa13.74□□□□□ -0.21
MBD3-203ENST00000585903 MAP2K1Q02750 393 aaPredicted RBP13.74□□□□□ -0.21
MBD3-203ENST00000585903 CXCL9Q07325 125 aa13.74□□□□□ -0.21
MBD3-203ENST00000585903 NEUROD2Q15784 382 aa13.74□□□□□ -0.21
MBD3-203ENST00000585903 DIEXFQ68CQ4 756 aaKnown RBP13.74□□□□□ -0.21
MBD3-203ENST00000585903 HHIPL1Q96JK4 782 aa13.74□□□□□ -0.21
MBD3-203ENST00000585903 ECE1P42892 770 aa13.73□□□□□ -0.21
MBD3-203ENST00000585903 GNAI1P63096 354 aa13.73□□□□□ -0.21
MBD3-203ENST00000585903 DUSP27Q5VZP5 1158 aa13.73□□□□□ -0.21
MBD3-203ENST00000585903 CIAPIN1Q6FI81 312 aa13.73□□□□□ -0.21
MBD3-203ENST00000585903 TAF1P21675 1872 aa13.72□□□□□ -0.21
MBD3-203ENST00000585903 CCDC85CA6NKD9 419 aa13.72□□□□□ -0.21
MBD3-203ENST00000585903 KRT24Q2M2I5 525 aa13.72□□□□□ -0.21
MBD3-203ENST00000585903 NECTIN2Q92692 538 aa13.72□□□□□ -0.21
MBD3-203ENST00000585903 DPF2Q92785 391 aa13.72□□□□□ -0.21
MBD3-203ENST00000585903 MBIPQ9NS73 344 aa13.72□□□□□ -0.21
MBD3-203ENST00000585903 LAS1LQ9Y4W2 734 aaKnown RBP13.72□□□□□ -0.21
MBD3-203ENST00000585903 WDR33Q9C0J8 1336 aaKnown RBP13.71□□□□□ -0.21
MBD3-203ENST00000585903 TCERG1O14776 1098 aaKnown RBP13.71□□□□□ -0.21
MBD3-203ENST00000585903 ZBTB38Q8NAP3 1195 aaPredicted RBP13.71□□□□□ -0.21
MBD3-203ENST00000585903 TLL2Q9Y6L7 1015 aa13.71□□□□□ -0.21
MBD3-203ENST00000585903 ZNF609O15014 1411 aa13.71□□□□□ -0.22
MBD3-203ENST00000585903 RPS12P25398 132 aaKnown RBP13.7□□□□□ -0.22
MBD3-203ENST00000585903 GMPSP49915 693 aaPredicted RBP13.7□□□□□ -0.22
MBD3-203ENST00000585903 GOLGA2Q08379 1002 aa13.7□□□□□ -0.22
MBD3-203ENST00000585903 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
MBD3-203ENST00000585903 CCDC191Q8NCU4 936 aa13.7□□□□□ -0.22
MBD3-203ENST00000585903 PODXL2Q9NZ53 605 aa13.7□□□□□ -0.22
MBD3-203ENST00000585903 ABT1Q9ULW3 272 aaKnown RBP13.7□□□□□ -0.22
MBD3-203ENST00000585903 MAP2K2P36507 400 aa13.69□□□□□ -0.22
MBD3-203ENST00000585903 WASHC4Q2M389 1173 aa13.69□□□□□ -0.22
MBD3-203ENST00000585903 CST9Q5W186 159 aa13.69□□□□□ -0.22
MBD3-203ENST00000585903 FAM89AQ96GI7 184 aa13.69□□□□□ -0.22
MBD3-203ENST00000585903 EYA3Q99504 573 aa13.69□□□□□ -0.22
MBD3-203ENST00000585903 CACNA1FO60840 1977 aa13.69□□□□□ -0.22
MBD3-203ENST00000585903 H7C1D1 291 aa13.68□□□□□ -0.22
MBD3-203ENST00000585903 IRS4O14654 1257 aaPredicted RBP13.68□□□□□ -0.22
MBD3-203ENST00000585903 CA12O43570 354 aa13.68□□□□□ -0.22
MBD3-203ENST00000585903 DDX58O95786 925 aaKnown RBP13.68□□□□□ -0.22
MBD3-203ENST00000585903 PCCAP05165 728 aaPredicted RBP13.68□□□□□ -0.22
MBD3-203ENST00000585903 RPS8P62241 208 aaKnown RBP13.68□□□□□ -0.22
MBD3-203ENST00000585903 CDC37L1Q7L3B6 337 aa13.68□□□□□ -0.22
MBD3-203ENST00000585903 RIC3Q7Z5B4 369 aa13.68□□□□□ -0.22
MBD3-203ENST00000585903 SLC51AQ86UW1 340 aa13.68□□□□□ -0.22
MBD3-203ENST00000585903 BCL2L13Q9BXK5 485 aa13.68□□□□□ -0.22
MBD3-203ENST00000585903 PSME4Q14997 1843 aa13.68□□□□□ -0.22
MBD3-203ENST00000585903 YDJCA8MPS7 323 aa13.67□□□□□ -0.22
MBD3-203ENST00000585903 ATP5J2-PTCD1G3V325 749 aa13.67□□□□□ -0.22
MBD3-203ENST00000585903 APAF1O14727 1248 aa13.67□□□□□ -0.22
MBD3-203ENST00000585903 CCDC27Q2M243 656 aa13.67□□□□□ -0.22
MBD3-203ENST00000585903 CCDC30Q5VVM6 783 aa13.67□□□□□ -0.22
MBD3-203ENST00000585903 SAPCD2Q86UD0 394 aa13.67□□□□□ -0.22
MBD3-203ENST00000585903 CELF1Q92879 486 aaKnown RBP13.67□□□□□ -0.22
MBD3-203ENST00000585903 CAPNS2Q96L46 248 aa13.67□□□□□ -0.22
MBD3-203ENST00000585903 CNOT7Q9UIV1 285 aaKnown RBP13.67□□□□□ -0.22
MBD3-203ENST00000585903 NSFL1CQ9UNZ2 370 aaKnown RBP13.67□□□□□ -0.22
MBD3-203ENST00000585903 MYH3P11055 1940 aa13.66□□□□□ -0.22
MBD3-203ENST00000585903 RAD17O75943 681 aa13.66□□□□□ -0.22
MBD3-203ENST00000585903 CCDC152Q4G0S7 254 aa13.66□□□□□ -0.22
MBD3-203ENST00000585903 BEGAINQ9BUH8 593 aa13.66□□□□□ -0.22
MBD3-203ENST00000585903 PDE8AO60658 829 aa13.65□□□□□ -0.22
MBD3-203ENST00000585903 MICALL2Q8IY33 904 aa13.65□□□□□ -0.22
MBD3-203ENST00000585903 GPR101Q96P66 508 aaPredicted RBP13.65□□□□□ -0.22
MBD3-203ENST00000585903 METTL22Q9BUU2 404 aaPredicted RBP13.65□□□□□ -0.22
MBD3-203ENST00000585903 CWC25Q9NXE8 425 aaPredicted RBP13.65□□□□□ -0.22
MBD3-203ENST00000585903 POLLQ9UGP5 575 aa13.65□□□□□ -0.22
MBD3-203ENST00000585903 RTL9Q8NET4 1388 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms