RNA–Protein interactions for RNA: ENST00000585856.2

PTBP1-206, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 1,217 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-206ENST00000585856 DBF4Q9UBU7 674 aaPredicted RBP34.61■■■■□ 3.13
PTBP1-206ENST00000585856 FOXN1O15353 648 aa34.6■■■■□ 3.13
PTBP1-206ENST00000585856 GRAPQ13588 217 aa34.6■■■■□ 3.13
PTBP1-206ENST00000585856 GRAPLQ8TC17 118 aaPredicted RBP34.6■■■■□ 3.13
PTBP1-206ENST00000585856 ADARB2Q9NS39 739 aaKnown RBP34.59■■■■□ 3.13
PTBP1-206ENST00000585856 GPRC5DQ9NZD1 345 aa34.59■■■■□ 3.13
PTBP1-206ENST00000585856 ABT1Q9ULW3 272 aaKnown RBP34.59■■■■□ 3.13
PTBP1-206ENST00000585856 ADAMTS8Q9UP79 889 aa34.59■■■■□ 3.13
PTBP1-206ENST00000585856 CXCL9Q07325 125 aa34.58■■■■□ 3.13
PTBP1-206ENST00000585856 KIAA2012Q0VF49 1180 aa34.58■■■■□ 3.13
PTBP1-206ENST00000585856 ANKRD13DQ6ZTN6 518 aa34.58■■■■□ 3.13
PTBP1-206ENST00000585856 CFAP44Q96MT7 982 aa34.58■■■■□ 3.13
PTBP1-206ENST00000585856 PRDM10Q9NQV6 1147 aa34.58■■■■□ 3.13
PTBP1-206ENST00000585856 CTCFP49711 727 aaPredicted RBP34.57■■■■□ 3.12
PTBP1-206ENST00000585856 CDHR2Q9BYE9 1310 aa34.56■■■■□ 3.12
PTBP1-206ENST00000585856 HYPKQ9NX55 129 aa34.56■■■■□ 3.12
PTBP1-206ENST00000585856 WBP1LQ9NX94 342 aa34.56■■■■□ 3.12
PTBP1-206ENST00000585856 CIAPIN1Q6FI81 312 aa34.54■■■■□ 3.12
PTBP1-206ENST00000585856 ISCA1Q9BUE6 129 aa34.54■■■■□ 3.12
PTBP1-206ENST00000585856 WDR33Q9C0J8 1336 aaKnown RBP34.54■■■■□ 3.12
PTBP1-206ENST00000585856 THSD7BQ9C0I4 1608 aa34.53■■■■□ 3.12
PTBP1-206ENST00000585856 DUOX1Q9NRD9 1551 aa34.53■■■■□ 3.12
PTBP1-206ENST00000585856 TNIP1Q15025 636 aa34.52■■■■□ 3.12
PTBP1-206ENST00000585856 DUSP27Q5VZP5 1158 aa34.52■■■■□ 3.12
PTBP1-206ENST00000585856 MAP2K1Q02750 393 aaPredicted RBP34.51■■■■□ 3.12
PTBP1-206ENST00000585856 GMPSP49915 693 aaPredicted RBP34.5■■■■□ 3.11
PTBP1-206ENST00000585856 SF3B3Q15393 1217 aaKnown RBP34.5■■■■□ 3.11
PTBP1-206ENST00000585856 FAM89AQ96GI7 184 aa34.49■■■■□ 3.11
PTBP1-206ENST00000585856 MBIPQ9NS73 344 aa34.49■■■■□ 3.11
PTBP1-206ENST00000585856 ECE1P42892 770 aa34.48■■■■□ 3.11
PTBP1-206ENST00000585856 TRIM28Q13263 835 aaKnown RBP34.48■■■■□ 3.11
PTBP1-206ENST00000585856 BCL2L13Q9BXK5 485 aa34.48■■■■□ 3.11
PTBP1-206ENST00000585856 PRKRIP1Q9H875 184 aaPredicted RBP34.48■■■■□ 3.11
PTBP1-206ENST00000585856 ATP5J2-PTCD1G3V325 749 aa34.47■■■■□ 3.11
PTBP1-206ENST00000585856 CALD1Q05682 793 aaKnown RBP34.47■■■■□ 3.11
PTBP1-206ENST00000585856 RAD17O75943 681 aa34.46■■■■□ 3.11
PTBP1-206ENST00000585856 FMR1Q06787 632 aaKnown RBP eCLIP34.46■■■■□ 3.11
PTBP1-206ENST00000585856 CST9Q5W186 159 aa34.46■■■■□ 3.11
PTBP1-206ENST00000585856 TRAF5O00463 557 aa34.45■■■■□ 3.11
PTBP1-206ENST00000585856 ZNF853P0CG23 659 aa34.45■■■■□ 3.11
PTBP1-206ENST00000585856 ZC3H15Q8WU90 426 aaKnown RBP34.45■■■■□ 3.11
PTBP1-206ENST00000585856 ZNF428Q96B54 188 aa34.45■■■■□ 3.11
PTBP1-206ENST00000585856 PGAP2Q9UHJ9 254 aa34.45■■■■□ 3.11
PTBP1-206ENST00000585856 TLL2Q9Y6L7 1015 aa34.45■■■■□ 3.11
PTBP1-206ENST00000585856 CAPNS2Q96L46 248 aa34.44■■■■□ 3.1
PTBP1-206ENST00000585856 IFT57Q9NWB7 429 aa34.44■■■■□ 3.1
PTBP1-206ENST00000585856 WASHC4Q2M389 1173 aa34.43■■■■□ 3.1
PTBP1-206ENST00000585856 PAXIP1Q6ZW49 1069 aaPredicted RBP34.43■■■■□ 3.1
PTBP1-206ENST00000585856 CELF1Q92879 486 aaKnown RBP34.43■■■■□ 3.1
PTBP1-206ENST00000585856 YDJCA8MPS7 323 aa34.42■■■■□ 3.1
PTBP1-206ENST00000585856 HSP90B1P14625 803 aaKnown RBP34.42■■■■□ 3.1
PTBP1-206ENST00000585856 LBX1P52954 281 aa34.42■■■■□ 3.1
PTBP1-206ENST00000585856 GNAI1P63096 354 aa34.42■■■■□ 3.1
PTBP1-206ENST00000585856 GOLGA2Q08379 1002 aa34.42■■■■□ 3.1
PTBP1-206ENST00000585856 RIC3Q7Z5B4 369 aa34.42■■■■□ 3.1
PTBP1-206ENST00000585856 NSFL1CQ9UNZ2 370 aaKnown RBP34.42■■■■□ 3.1
PTBP1-206ENST00000585856 IRS4O14654 1257 aaPredicted RBP34.41■■■■□ 3.1
PTBP1-206ENST00000585856 CNOT7Q9UIV1 285 aaKnown RBP34.4■■■■□ 3.1
PTBP1-206ENST00000585856 H7C1D1 291 aa34.39■■■■□ 3.1
PTBP1-206ENST00000585856 APAF1O14727 1248 aa34.39■■■■□ 3.1
PTBP1-206ENST00000585856 RTL5Q5HYW3 569 aaPredicted RBP34.39■■■■□ 3.1
PTBP1-206ENST00000585856 ZBTB38Q8NAP3 1195 aaPredicted RBP34.39■■■■□ 3.1
PTBP1-206ENST00000585856 CHMP4AQ9BY43 222 aa34.39■■■■□ 3.1
PTBP1-206ENST00000585856 HSPA8P11142 646 aaKnown RBP34.38■■■■□ 3.09
PTBP1-206ENST00000585856 CYP4F22Q6NT55 531 aa34.38■■■■□ 3.09
PTBP1-206ENST00000585856 DPF2Q92785 391 aa34.38■■■■□ 3.09
PTBP1-206ENST00000585856 GPR101Q96P66 508 aaPredicted RBP34.38■■■■□ 3.09
PTBP1-206ENST00000585856 EYA3Q99504 573 aa34.38■■■■□ 3.09
PTBP1-206ENST00000585856 BEGAINQ9BUH8 593 aa34.38■■■■□ 3.09
PTBP1-206ENST00000585856 CELF2O95319 508 aaKnown RBP34.37■■■■□ 3.09
PTBP1-206ENST00000585856 HHIPL1Q96JK4 782 aa34.37■■■■□ 3.09
PTBP1-206ENST00000585856 GLIS2Q9BZE0 524 aaPredicted RBP34.37■■■■□ 3.09
PTBP1-206ENST00000585856 COL4A1P02462 1669 aa34.37■■■■□ 3.09
PTBP1-206ENST00000585856 C6orf229H3BNL8 230 aa34.36■■■■□ 3.09
PTBP1-206ENST00000585856 HIRAP54198 1017 aaPredicted RBP34.36■■■■□ 3.09
PTBP1-206ENST00000585856 RPS8P62241 208 aaKnown RBP34.36■■■■□ 3.09
PTBP1-206ENST00000585856 CDC37L1Q7L3B6 337 aa34.36■■■■□ 3.09
PTBP1-206ENST00000585856 SAPCD2Q86UD0 394 aa34.36■■■■□ 3.09
PTBP1-206ENST00000585856 MICALL2Q8IY33 904 aa34.35■■■■□ 3.09
PTBP1-206ENST00000585856 TRPM4Q8TD43 1214 aa34.35■■■■□ 3.09
PTBP1-206ENST00000585856 PHAXQ9H814 394 aaKnown RBP34.35■■■■□ 3.09
PTBP1-206ENST00000585856 POLLQ9UGP5 575 aa34.35■■■■□ 3.09
PTBP1-206ENST00000585856 MAP2K2P36507 400 aa34.34■■■■□ 3.09
PTBP1-206ENST00000585856 GPSM2P81274 684 aa34.34■■■■□ 3.09
PTBP1-206ENST00000585856 GRM1Q13255 1194 aa34.34■■■■□ 3.09
PTBP1-206ENST00000585856 DBNDD1Q9H9R9 158 aa34.34■■■■□ 3.09
PTBP1-206ENST00000585856 PSMD14O00487 310 aa34.33■■■■□ 3.09
PTBP1-206ENST00000585856 RPS12P25398 132 aaKnown RBP34.33■■■■□ 3.09
PTBP1-206ENST00000585856 CCDC191Q8NCU4 936 aa34.33■■■■□ 3.09
PTBP1-206ENST00000585856 ELL2O00472 640 aaPredicted RBP34.32■■■■□ 3.08
PTBP1-206ENST00000585856 RIMBP2O15034 1052 aa34.32■■■■□ 3.08
PTBP1-206ENST00000585856 MYD88Q99836 296 aa34.31■■■■□ 3.08
PTBP1-206ENST00000585856 PODXL2Q9NZ53 605 aa34.31■■■■□ 3.08
PTBP1-206ENST00000585856 ZBTB12Q9Y330 459 aaPredicted RBP34.31■■■■□ 3.08
PTBP1-206ENST00000585856 ECE2O60344 883 aa34.3■■■■□ 3.08
PTBP1-206ENST00000585856 DDX58O95786 925 aaKnown RBP34.3■■■■□ 3.08
PTBP1-206ENST00000585856 PCCAP05165 728 aaPredicted RBP34.3■■■■□ 3.08
PTBP1-206ENST00000585856 TBC1D16Q8TBP0 767 aa34.3■■■■□ 3.08
PTBP1-206ENST00000585856 POLR2AP24928 1970 aaKnown RBP34.3■■■■□ 3.08
PTBP1-206ENST00000585856 SHTN1A0MZ66 631 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms