RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 ATP6V0A2Q9Y487 856 aa11.05□□□□□ -0.64
ATG4D-202ENST00000585437 CEP350Q5VT06 3117 aa11.05□□□□□ -0.64
ATG4D-202ENST00000585437 KDM2BQ8NHM5 1336 aa11.05□□□□□ -0.64
ATG4D-202ENST00000585437 RTL9Q8NET4 1388 aa11.04□□□□□ -0.64
ATG4D-202ENST00000585437 GLTPD2A6NH11 291 aa11.04□□□□□ -0.64
ATG4D-202ENST00000585437 IRS4O14654 1257 aaPredicted RBP11.04□□□□□ -0.64
ATG4D-202ENST00000585437 FKBP5Q13451 457 aaPredicted RBP11.04□□□□□ -0.64
ATG4D-202ENST00000585437 GRAPQ13588 217 aa11.04□□□□□ -0.64
ATG4D-202ENST00000585437 GRAPLQ8TC17 118 aaPredicted RBP11.04□□□□□ -0.64
ATG4D-202ENST00000585437 DNAAF4Q8WXU2 420 aa11.04□□□□□ -0.64
ATG4D-202ENST00000585437 ZNF428Q96B54 188 aa11.04□□□□□ -0.64
ATG4D-202ENST00000585437 NMRK2Q9NPI5 230 aa11.04□□□□□ -0.64
ATG4D-202ENST00000585437 SCN9AQ15858 1988 aa11.03□□□□□ -0.64
ATG4D-202ENST00000585437 BBOX1O75936 387 aa11.03□□□□□ -0.64
ATG4D-202ENST00000585437 CASP7P55210 303 aa11.03□□□□□ -0.64
ATG4D-202ENST00000585437 C1QTNF8P60827 252 aa11.03□□□□□ -0.64
ATG4D-202ENST00000585437 NEXNQ0ZGT2 675 aa11.03□□□□□ -0.64
ATG4D-202ENST00000585437 CWF19L2Q2TBE0 894 aaKnown RBP11.03□□□□□ -0.64
ATG4D-202ENST00000585437 TMC4Q7Z404 712 aa11.03□□□□□ -0.64
ATG4D-202ENST00000585437 LINS1Q8NG48 757 aa11.03□□□□□ -0.64
ATG4D-202ENST00000585437 CDCA7LQ96GN5 454 aa11.03□□□□□ -0.64
ATG4D-202ENST00000585437 PDE8AO60658 829 aa11.02□□□□□ -0.65
ATG4D-202ENST00000585437 HSP90B1P14625 803 aaKnown RBP11.02□□□□□ -0.65
ATG4D-202ENST00000585437 IARSP41252 1262 aaKnown RBP11.02□□□□□ -0.65
ATG4D-202ENST00000585437 GCKRQ14397 625 aa11.02□□□□□ -0.65
ATG4D-202ENST00000585437 RTL5Q5HYW3 569 aaPredicted RBP11.02□□□□□ -0.65
ATG4D-202ENST00000585437 DDX46Q7L014 1031 aaKnown RBP11.02□□□□□ -0.65
ATG4D-202ENST00000585437 SP8Q8IXZ3 490 aa11.02□□□□□ -0.65
ATG4D-202ENST00000585437 RTFDC1Q9BY42 306 aaPredicted RBP11.02□□□□□ -0.65
ATG4D-202ENST00000585437 H7C1W4 665 aa11.01□□□□□ -0.65
ATG4D-202ENST00000585437 FZD9O00144 591 aa11.01□□□□□ -0.65
ATG4D-202ENST00000585437 BEND3Q5T5X7 828 aa11.01□□□□□ -0.65
ATG4D-202ENST00000585437 CELF1Q92879 486 aaKnown RBP11.01□□□□□ -0.65
ATG4D-202ENST00000585437 PLA2G12BQ9BX93 195 aa11.01□□□□□ -0.65
ATG4D-202ENST00000585437 ZNF277Q9NRM2 450 aaPredicted RBP11.01□□□□□ -0.65
ATG4D-202ENST00000585437 POTECB2RU33 542 aa11□□□□□ -0.65
ATG4D-202ENST00000585437 F6X3S4 739 aa11□□□□□ -0.65
ATG4D-202ENST00000585437 CT47B1P0C2W7 299 aaPredicted RBP11□□□□□ -0.65
ATG4D-202ENST00000585437 CTSWP56202 376 aa11□□□□□ -0.65
ATG4D-202ENST00000585437 ALDH1L2Q3SY69 923 aa11□□□□□ -0.65
ATG4D-202ENST00000585437 MRPL50Q8N5N7 158 aaKnown RBP11□□□□□ -0.65
ATG4D-202ENST00000585437 L3MBTL3Q96JM7 780 aaPredicted RBP11□□□□□ -0.65
ATG4D-202ENST00000585437 VPS33BQ9H267 617 aa11□□□□□ -0.65
ATG4D-202ENST00000585437 ZNF541Q9H0D2 1346 aa11□□□□□ -0.65
ATG4D-202ENST00000585437 TOMM70O94826 608 aa10.99□□□□□ -0.65
ATG4D-202ENST00000585437 CCDC152Q4G0S7 254 aa10.99□□□□□ -0.65
ATG4D-202ENST00000585437 UBE3BQ7Z3V4 1068 aa10.99□□□□□ -0.65
ATG4D-202ENST00000585437 TTLL11Q8NHH1 800 aa10.99□□□□□ -0.65
ATG4D-202ENST00000585437 SSH1Q8WYL5 1049 aa10.99□□□□□ -0.65
ATG4D-202ENST00000585437 JARID2Q92833 1246 aaPredicted RBP10.99□□□□□ -0.65
ATG4D-202ENST00000585437 SEC31BQ9NQW1 1179 aa10.99□□□□□ -0.65
ATG4D-202ENST00000585437 PTPRCP08575 1304 aa10.99□□□□□ -0.65
ATG4D-202ENST00000585437 ARAP2Q8WZ64 1704 aa10.98□□□□□ -0.65
ATG4D-202ENST00000585437 BRPF1P55201 1214 aaPredicted RBP10.98□□□□□ -0.65
ATG4D-202ENST00000585437 KIAA2012Q0VF49 1180 aa10.98□□□□□ -0.65
ATG4D-202ENST00000585437 DPY19L2Q6NUT2 758 aa10.98□□□□□ -0.65
ATG4D-202ENST00000585437 SUPT20HQ8NEM7 779 aa10.98□□□□□ -0.65
ATG4D-202ENST00000585437 ALDH1L1O75891 902 aa10.97□□□□□ -0.65
ATG4D-202ENST00000585437 DDNO94850 711 aaPredicted RBP10.97□□□□□ -0.65
ATG4D-202ENST00000585437 CSF1RP07333 972 aa10.97□□□□□ -0.65
ATG4D-202ENST00000585437 VEGFAP15692 232 aaPredicted RBP10.97□□□□□ -0.65
ATG4D-202ENST00000585437 RPS8P62241 208 aaKnown RBP10.97□□□□□ -0.65
ATG4D-202ENST00000585437 DPP8Q6V1X1 898 aaPredicted RBP10.97□□□□□ -0.65
ATG4D-202ENST00000585437 MPNDQ8N594 471 aa10.97□□□□□ -0.65
ATG4D-202ENST00000585437 RBM46Q8TBY0 533 aaKnown RBP10.97□□□□□ -0.65
ATG4D-202ENST00000585437 GREM2Q9H772 168 aa10.97□□□□□ -0.65
ATG4D-202ENST00000585437 RRAGCQ9HB90 399 aa10.97□□□□□ -0.65
ATG4D-202ENST00000585437 PODXL2Q9NZ53 605 aa10.97□□□□□ -0.65
ATG4D-202ENST00000585437 UTYO14607 1347 aa10.97□□□□□ -0.65
ATG4D-202ENST00000585437 TRPM7Q96QT4 1865 aa10.96□□□□□ -0.65
ATG4D-202ENST00000585437 ZNF609O15014 1411 aa10.96□□□□□ -0.65
ATG4D-202ENST00000585437 GRM8O00222 908 aa10.96□□□□□ -0.65
ATG4D-202ENST00000585437 PPIP5K2O43314 1243 aa10.96□□□□□ -0.65
ATG4D-202ENST00000585437 HNRNPUQ00839 825 aaKnown RBP eCLIP10.96□□□□□ -0.65
ATG4D-202ENST00000585437 AOC3Q16853 763 aa10.96□□□□□ -0.65
ATG4D-202ENST00000585437 GPC2Q8N158 579 aa10.96□□□□□ -0.65
ATG4D-202ENST00000585437 JDP2Q8WYK2 163 aa10.96□□□□□ -0.65
ATG4D-202ENST00000585437 TMX4Q9H1E5 349 aaPredicted RBP10.96□□□□□ -0.65
ATG4D-202ENST00000585437 ZBED9Q6R2W3 1325 aa10.95□□□□□ -0.66
ATG4D-202ENST00000585437 GPSM2P81274 684 aa10.95□□□□□ -0.66
ATG4D-202ENST00000585437 FOXO4P98177 505 aa10.95□□□□□ -0.66
ATG4D-202ENST00000585437 FAM161AQ3B820 660 aa10.95□□□□□ -0.66
ATG4D-202ENST00000585437 LARGE2Q8N3Y3 721 aa10.95□□□□□ -0.66
ATG4D-202ENST00000585437 CDC5LQ99459 802 aaKnown RBP10.95□□□□□ -0.66
ATG4D-202ENST00000585437 SRCIN1Q9C0H9 1055 aa10.95□□□□□ -0.66
ATG4D-202ENST00000585437 POLLQ9UGP5 575 aa10.95□□□□□ -0.66
ATG4D-202ENST00000585437 MYH13Q9UKX3 1938 aa10.95□□□□□ -0.66
ATG4D-202ENST00000585437 XDHP47989 1333 aa10.94□□□□□ -0.66
ATG4D-202ENST00000585437 ECM29Q5VYK3 1845 aa10.94□□□□□ -0.66
ATG4D-202ENST00000585437 HSPA6P17066 643 aa10.94□□□□□ -0.66
ATG4D-202ENST00000585437 FSTL1Q12841 308 aa10.94□□□□□ -0.66
ATG4D-202ENST00000585437 ANKRD18AQ8IVF6 992 aa10.94□□□□□ -0.66
ATG4D-202ENST00000585437 NIM1KQ8IY84 436 aa10.94□□□□□ -0.66
ATG4D-202ENST00000585437 TBC1D16Q8TBP0 767 aa10.94□□□□□ -0.66
ATG4D-202ENST00000585437 KAZALD1Q96I82 304 aa10.94□□□□□ -0.66
ATG4D-202ENST00000585437 CCDC85AQ96PX6 553 aaPredicted RBP10.94□□□□□ -0.66
ATG4D-202ENST00000585437 BCL2L13Q9BXK5 485 aa10.94□□□□□ -0.66
ATG4D-202ENST00000585437 SMC4Q9NTJ3 1288 aa10.94□□□□□ -0.66
ATG4D-202ENST00000585437 BSDC1Q9NW68 430 aaPredicted RBP10.94□□□□□ -0.66
ATG4D-202ENST00000585437 NSFL1CQ9UNZ2 370 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms