RNA–Protein interactions for RNA: ENST00000585325.5

PRKCSH-201, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-201ENST00000585325 GJA3Q9Y6H8 435 aa17.32■□□□□ 0.36
PRKCSH-201ENST00000585325 PPIP5K2O43314 1243 aa17.31■□□□□ 0.36
PRKCSH-201ENST00000585325 BBOX1O75936 387 aa17.31■□□□□ 0.36
PRKCSH-201ENST00000585325 EPHX2P34913 555 aa17.31■□□□□ 0.36
PRKCSH-201ENST00000585325 GOLGA2Q08379 1002 aa17.31■□□□□ 0.36
PRKCSH-201ENST00000585325 NIM1KQ8IY84 436 aa17.31■□□□□ 0.36
PRKCSH-201ENST00000585325 FAM89AQ96GI7 184 aa17.31■□□□□ 0.36
PRKCSH-201ENST00000585325 CLEC11AQ9Y240 323 aa17.31■□□□□ 0.36
PRKCSH-201ENST00000585325 RASSF10A6NK89 507 aa17.3■□□□□ 0.36
PRKCSH-201ENST00000585325 GRAPQ13588 217 aa17.3■□□□□ 0.36
PRKCSH-201ENST00000585325 AOC3Q16853 763 aa17.3■□□□□ 0.36
PRKCSH-201ENST00000585325 RTL5Q5HYW3 569 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-201ENST00000585325 DPP8Q6V1X1 898 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-201ENST00000585325 SP8Q8IXZ3 490 aa17.3■□□□□ 0.36
PRKCSH-201ENST00000585325 C8orf58Q8NAV2 365 aa17.3■□□□□ 0.36
PRKCSH-201ENST00000585325 SUPT20HQ8NEM7 779 aa17.3■□□□□ 0.36
PRKCSH-201ENST00000585325 GRAPLQ8TC17 118 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-201ENST00000585325 PHAXQ9H814 394 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-201ENST00000585325 TAF1P21675 1872 aa17.3■□□□□ 0.36
PRKCSH-201ENST00000585325 DEFB115Q30KQ5 88 aa17.29■□□□□ 0.36
PRKCSH-201ENST00000585325 PNMA8AQ86V59 439 aaPredicted RBP17.29■□□□□ 0.36
PRKCSH-201ENST00000585325 ZNF316A6NFI3 1004 aaPredicted RBP17.28■□□□□ 0.36
PRKCSH-201ENST00000585325 ANP32CO43423 234 aa17.28■□□□□ 0.36
PRKCSH-201ENST00000585325 LMOD1P29536 600 aaPredicted RBP17.28■□□□□ 0.36
PRKCSH-201ENST00000585325 MAP2K1Q02750 393 aaPredicted RBP17.28■□□□□ 0.36
PRKCSH-201ENST00000585325 MPNDQ8N594 471 aa17.28■□□□□ 0.36
PRKCSH-201ENST00000585325 ADAMTSL1Q8N6G6 1762 aa17.28■□□□□ 0.36
PRKCSH-201ENST00000585325 WDR33Q9C0J8 1336 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-201ENST00000585325 MLLT1Q03111 559 aaPredicted RBP17.27■□□□□ 0.36
PRKCSH-201ENST00000585325 CCDC30Q5VVM6 783 aa17.27■□□□□ 0.36
PRKCSH-201ENST00000585325 TSR2Q969E8 191 aaKnown RBP17.27■□□□□ 0.36
PRKCSH-201ENST00000585325 MYD88Q99836 296 aa17.27■□□□□ 0.36
PRKCSH-201ENST00000585325 RTFDC1Q9BY42 306 aaPredicted RBP17.27■□□□□ 0.36
PRKCSH-201ENST00000585325 CHMP4AQ9BY43 222 aa17.27■□□□□ 0.36
PRKCSH-201ENST00000585325 VPS33BQ9H267 617 aa17.27■□□□□ 0.36
PRKCSH-201ENST00000585325 MRS2Q9HD23 443 aa17.27■□□□□ 0.36
PRKCSH-201ENST00000585325 PCDH10Q9P2E7 1040 aa17.27■□□□□ 0.36
PRKCSH-201ENST00000585325 CCDC85CA6NKD9 419 aa17.26■□□□□ 0.35
PRKCSH-201ENST00000585325 IRS4O14654 1257 aaPredicted RBP17.26■□□□□ 0.35
PRKCSH-201ENST00000585325 TRIM28Q13263 835 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-201ENST00000585325 MAP1SQ66K74 1059 aaPredicted RBP17.26■□□□□ 0.35
PRKCSH-201ENST00000585325 TMC4Q7Z404 712 aa17.26■□□□□ 0.35
PRKCSH-201ENST00000585325 TSPYL6Q8N831 410 aa17.26■□□□□ 0.35
PRKCSH-201ENST00000585325 LTBP1Q14766 1721 aa17.26■□□□□ 0.35
PRKCSH-201ENST00000585325 LRRC37AA6NMS7 1700 aa17.25■□□□□ 0.35
PRKCSH-201ENST00000585325 DDX58O95786 925 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-201ENST00000585325 SCNN1DP51172 638 aa17.25■□□□□ 0.35
PRKCSH-201ENST00000585325 SF3B3Q15393 1217 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-201ENST00000585325 CCDC27Q2M243 656 aa17.25■□□□□ 0.35
PRKCSH-201ENST00000585325 WWC1Q8IX03 1113 aa17.25■□□□□ 0.35
PRKCSH-201ENST00000585325 CNTROBQ8N137 903 aa17.25■□□□□ 0.35
PRKCSH-201ENST00000585325 ZNRF3Q9ULT6 936 aa17.25■□□□□ 0.35
PRKCSH-201ENST00000585325 ABT1Q9ULW3 272 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-201ENST00000585325 EPS15P42566 896 aa17.24■□□□□ 0.35
PRKCSH-201ENST00000585325 KIAA2012Q0VF49 1180 aa17.24■□□□□ 0.35
PRKCSH-201ENST00000585325 ZBTB38Q8NAP3 1195 aaPredicted RBP17.24■□□□□ 0.35
PRKCSH-201ENST00000585325 CELF1Q92879 486 aaKnown RBP17.24■□□□□ 0.35
PRKCSH-201ENST00000585325 RGS19P49795 217 aa17.23■□□□□ 0.35
PRKCSH-201ENST00000585325 STK31Q9BXU1 1019 aa17.23■□□□□ 0.35
PRKCSH-201ENST00000585325 DUOX1Q9NRD9 1551 aa17.23■□□□□ 0.35
PRKCSH-201ENST00000585325 HSP90B1P14625 803 aaKnown RBP17.22■□□□□ 0.35
PRKCSH-201ENST00000585325 CXCL9Q07325 125 aa17.22■□□□□ 0.35
PRKCSH-201ENST00000585325 CCDC191Q8NCU4 936 aa17.22■□□□□ 0.35
PRKCSH-201ENST00000585325 METTL22Q9BUU2 404 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-201ENST00000585325 CWC25Q9NXE8 425 aaPredicted RBP17.22■□□□□ 0.35
PRKCSH-201ENST00000585325 NSFL1CQ9UNZ2 370 aaKnown RBP17.22■□□□□ 0.35
PRKCSH-201ENST00000585325 COL4A1P02462 1669 aa17.22■□□□□ 0.35
PRKCSH-201ENST00000585325 THSD7BQ9C0I4 1608 aa17.21■□□□□ 0.35
PRKCSH-201ENST00000585325 TWISTNBQ3B726 338 aaPredicted RBP17.21■□□□□ 0.35
PRKCSH-201ENST00000585325 CIAPIN1Q6FI81 312 aa17.21■□□□□ 0.35
PRKCSH-201ENST00000585325 MAP3K2Q9Y2U5 619 aa17.21■□□□□ 0.35
PRKCSH-201ENST00000585325 RAD17O75943 681 aa17.2■□□□□ 0.34
PRKCSH-201ENST00000585325 PCCAP05165 728 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-201ENST00000585325 KSR2Q6VAB6 950 aa17.2■□□□□ 0.34
PRKCSH-201ENST00000585325 PAXIP1Q6ZW49 1069 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-201ENST00000585325 USP50Q70EL3 339 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-201ENST00000585325 JARID2Q92833 1246 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-201ENST00000585325 BEGAINQ9BUH8 593 aa17.2■□□□□ 0.34
PRKCSH-201ENST00000585325 GPRC5DQ9NZD1 345 aa17.2■□□□□ 0.34
PRKCSH-201ENST00000585325 SALL2Q9Y467 1007 aaPredicted RBP17.2■□□□□ 0.34
PRKCSH-201ENST00000585325 IL16Q14005 1332 aa17.2■□□□□ 0.34
PRKCSH-201ENST00000585325 PI4KAP2A4QPH2 592 aa17.19■□□□□ 0.34
PRKCSH-201ENST00000585325 C6orf229H3BNL8 230 aa17.19■□□□□ 0.34
PRKCSH-201ENST00000585325 PDE8AO60658 829 aa17.19■□□□□ 0.34
PRKCSH-201ENST00000585325 GMPSP49915 693 aaPredicted RBP17.19■□□□□ 0.34
PRKCSH-201ENST00000585325 RPS8P62241 208 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-201ENST00000585325 GPSM2P81274 684 aa17.19■□□□□ 0.34
PRKCSH-201ENST00000585325 TNIP1Q15025 636 aa17.19■□□□□ 0.34
PRKCSH-201ENST00000585325 WASHC4Q2M389 1173 aa17.19■□□□□ 0.34
PRKCSH-201ENST00000585325 PI4KAP1Q8N8J0 262 aa17.19■□□□□ 0.34
PRKCSH-201ENST00000585325 CAPNS2Q96L46 248 aa17.19■□□□□ 0.34
PRKCSH-201ENST00000585325 BCL2L13Q9BXK5 485 aa17.19■□□□□ 0.34
PRKCSH-201ENST00000585325 SEC31BQ9NQW1 1179 aa17.19■□□□□ 0.34
PRKCSH-201ENST00000585325 ADARB2Q9NS39 739 aaKnown RBP17.19■□□□□ 0.34
PRKCSH-201ENST00000585325 YDJCA8MPS7 323 aa17.18■□□□□ 0.34
PRKCSH-201ENST00000585325 RIMBP2O15034 1052 aa17.18■□□□□ 0.34
PRKCSH-201ENST00000585325 GRM1Q13255 1194 aa17.18■□□□□ 0.34
PRKCSH-201ENST00000585325 CCDC152Q4G0S7 254 aa17.18■□□□□ 0.34
PRKCSH-201ENST00000585325 NCBP3Q53F19 620 aaKnown RBP17.18■□□□□ 0.34
PRKCSH-201ENST00000585325 CCDC85AQ96PX6 553 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms