RNA–Protein interactions for RNA: ENST00000585294.5

CUEDC1-213, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-213ENST00000585294 CELF1Q92879 486 aaKnown RBP16.46■□□□□ 0.23
CUEDC1-213ENST00000585294 SCN4AP35499 1836 aa16.46■□□□□ 0.23
CUEDC1-213ENST00000585294 ANKRD36CQ5JPF3 1778 aa16.46■□□□□ 0.22
CUEDC1-213ENST00000585294 CXCL9Q07325 125 aa16.45■□□□□ 0.22
CUEDC1-213ENST00000585294 SF3B3Q15393 1217 aaKnown RBP16.45■□□□□ 0.22
CUEDC1-213ENST00000585294 CNTROBQ8N137 903 aa16.45■□□□□ 0.22
CUEDC1-213ENST00000585294 TSR2Q969E8 191 aaKnown RBP16.45■□□□□ 0.22
CUEDC1-213ENST00000585294 ZNRF3Q9ULT6 936 aa16.45■□□□□ 0.22
CUEDC1-213ENST00000585294 LAMB2P55268 1798 aa16.44■□□□□ 0.22
CUEDC1-213ENST00000585294 IRS4O14654 1257 aaPredicted RBP16.44■□□□□ 0.22
CUEDC1-213ENST00000585294 GOLGA2Q08379 1002 aa16.44■□□□□ 0.22
CUEDC1-213ENST00000585294 COL13A1Q5TAT6 717 aaPredicted RBP16.44■□□□□ 0.22
CUEDC1-213ENST00000585294 SUPT20HQ8NEM7 779 aa16.44■□□□□ 0.22
CUEDC1-213ENST00000585294 MYD88Q99836 296 aa16.44■□□□□ 0.22
CUEDC1-213ENST00000585294 VPS33BQ9H267 617 aa16.44■□□□□ 0.22
CUEDC1-213ENST00000585294 LTBP1Q14766 1721 aa16.43■□□□□ 0.22
CUEDC1-213ENST00000585294 LMOD1P29536 600 aaPredicted RBP16.43■□□□□ 0.22
CUEDC1-213ENST00000585294 FMR1Q06787 632 aaKnown RBP eCLIP16.43■□□□□ 0.22
CUEDC1-213ENST00000585294 KIAA2012Q0VF49 1180 aa16.43■□□□□ 0.22
CUEDC1-213ENST00000585294 WWC1Q8IX03 1113 aa16.43■□□□□ 0.22
CUEDC1-213ENST00000585294 TAF1P21675 1872 aa16.43■□□□□ 0.22
CUEDC1-213ENST00000585294 COL4A1P02462 1669 aa16.43■□□□□ 0.22
CUEDC1-213ENST00000585294 HSPA1AP0DMV8 641 aaKnown RBP16.42■□□□□ 0.22
CUEDC1-213ENST00000585294 HSPA1BP0DMV9 641 aaKnown RBP16.42■□□□□ 0.22
CUEDC1-213ENST00000585294 ADAMTSL1Q8N6G6 1762 aa16.41■□□□□ 0.22
CUEDC1-213ENST00000585294 TMEM88BA6NKF7 163 aa16.41■□□□□ 0.22
CUEDC1-213ENST00000585294 YDJCA8MPS7 323 aa16.41■□□□□ 0.22
CUEDC1-213ENST00000585294 RAD17O75943 681 aa16.41■□□□□ 0.22
CUEDC1-213ENST00000585294 GMPSP49915 693 aaPredicted RBP16.41■□□□□ 0.22
CUEDC1-213ENST00000585294 GPSM2P81274 684 aa16.41■□□□□ 0.22
CUEDC1-213ENST00000585294 CCDC30Q5VVM6 783 aa16.41■□□□□ 0.22
CUEDC1-213ENST00000585294 ZBTB38Q8NAP3 1195 aaPredicted RBP16.41■□□□□ 0.22
CUEDC1-213ENST00000585294 SEC31BQ9NQW1 1179 aa16.41■□□□□ 0.22
CUEDC1-213ENST00000585294 GPRC5DQ9NZD1 345 aa16.41■□□□□ 0.22
CUEDC1-213ENST00000585294 NSFL1CQ9UNZ2 370 aaKnown RBP16.41■□□□□ 0.22
CUEDC1-213ENST00000585294 DDX60Q8IY21 1712 aaKnown RBP16.4■□□□□ 0.22
CUEDC1-213ENST00000585294 ZNF316A6NFI3 1004 aaPredicted RBP16.4■□□□□ 0.22
CUEDC1-213ENST00000585294 RIMBP2O15034 1052 aa16.4■□□□□ 0.22
CUEDC1-213ENST00000585294 ZEB1P37275 1124 aaPredicted RBP16.4■□□□□ 0.22
CUEDC1-213ENST00000585294 CCDC27Q2M243 656 aa16.4■□□□□ 0.22
CUEDC1-213ENST00000585294 TMC4Q7Z404 712 aa16.4■□□□□ 0.22
CUEDC1-213ENST00000585294 GPR101Q96P66 508 aaPredicted RBP16.4■□□□□ 0.22
CUEDC1-213ENST00000585294 METTL22Q9BUU2 404 aaPredicted RBP16.4■□□□□ 0.22
CUEDC1-213ENST00000585294 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
CUEDC1-213ENST00000585294 POLLQ9UGP5 575 aa16.4■□□□□ 0.22
CUEDC1-213ENST00000585294 CNTNAP1P78357 1384 aa16.39■□□□□ 0.21
CUEDC1-213ENST00000585294 VEGFBP49765 207 aa16.39■□□□□ 0.21
CUEDC1-213ENST00000585294 RPS8P62241 208 aaKnown RBP16.39■□□□□ 0.21
CUEDC1-213ENST00000585294 CIAPIN1Q6FI81 312 aa16.39■□□□□ 0.21
CUEDC1-213ENST00000585294 G2E3Q7L622 706 aa16.39■□□□□ 0.21
CUEDC1-213ENST00000585294 CCDC191Q8NCU4 936 aa16.39■□□□□ 0.21
CUEDC1-213ENST00000585294 CCDC85AQ96PX6 553 aaPredicted RBP16.39■□□□□ 0.21
CUEDC1-213ENST00000585294 MAP3K2Q9Y2U5 619 aa16.39■□□□□ 0.21
CUEDC1-213ENST00000585294 SALL2Q9Y467 1007 aaPredicted RBP16.39■□□□□ 0.21
CUEDC1-213ENST00000585294 DUOX1Q9NRD9 1551 aa16.38■□□□□ 0.21
CUEDC1-213ENST00000585294 SHTN1A0MZ66 631 aa16.38■□□□□ 0.21
CUEDC1-213ENST00000585294 PI4KAP2A4QPH2 592 aa16.38■□□□□ 0.21
CUEDC1-213ENST00000585294 C6orf229H3BNL8 230 aa16.38■□□□□ 0.21
CUEDC1-213ENST00000585294 TRAF5O00463 557 aa16.38■□□□□ 0.21
CUEDC1-213ENST00000585294 PCCAP05165 728 aaPredicted RBP16.38■□□□□ 0.21
CUEDC1-213ENST00000585294 WASHC4Q2M389 1173 aa16.38■□□□□ 0.21
CUEDC1-213ENST00000585294 USP50Q70EL3 339 aaPredicted RBP16.38■□□□□ 0.21
CUEDC1-213ENST00000585294 PI4KAP1Q8N8J0 262 aa16.38■□□□□ 0.21
CUEDC1-213ENST00000585294 KCNQ5Q9NR82 932 aa16.38■□□□□ 0.21
CUEDC1-213ENST00000585294 CWC25Q9NXE8 425 aaPredicted RBP16.38■□□□□ 0.21
CUEDC1-213ENST00000585294 DDX58O95786 925 aaKnown RBP16.37■□□□□ 0.21
CUEDC1-213ENST00000585294 IGKV5-2P06315 115 aa16.37■□□□□ 0.21
CUEDC1-213ENST00000585294 DOK7Q18PE1 504 aa16.37■□□□□ 0.21
CUEDC1-213ENST00000585294 TWISTNBQ3B726 338 aaPredicted RBP16.37■□□□□ 0.21
CUEDC1-213ENST00000585294 KSR2Q6VAB6 950 aa16.37■□□□□ 0.21
CUEDC1-213ENST00000585294 BCL2L13Q9BXK5 485 aa16.37■□□□□ 0.21
CUEDC1-213ENST00000585294 DBNDD1Q9H9R9 158 aa16.37■□□□□ 0.21
CUEDC1-213ENST00000585294 ADARB2Q9NS39 739 aaKnown RBP16.37■□□□□ 0.21
CUEDC1-213ENST00000585294 ZBTB12Q9Y330 459 aaPredicted RBP16.37■□□□□ 0.21
CUEDC1-213ENST00000585294 PCNTO95613 3336 aa16.36■□□□□ 0.21
CUEDC1-213ENST00000585294 ANP32CO43423 234 aa16.36■□□□□ 0.21
CUEDC1-213ENST00000585294 HIRAP54198 1017 aaPredicted RBP16.36■□□□□ 0.21
CUEDC1-213ENST00000585294 TNIP1Q15025 636 aa16.36■□□□□ 0.21
CUEDC1-213ENST00000585294 TBC1D16Q8TBP0 767 aa16.36■□□□□ 0.21
CUEDC1-213ENST00000585294 PDE8AO60658 829 aa16.35■□□□□ 0.21
CUEDC1-213ENST00000585294 SLC4A2P04920 1241 aa16.35■□□□□ 0.21
CUEDC1-213ENST00000585294 CST9Q5W186 159 aa16.35■□□□□ 0.21
CUEDC1-213ENST00000585294 CNOT7Q9UIV1 285 aaKnown RBP16.35■□□□□ 0.21
CUEDC1-213ENST00000585294 ABT1Q9ULW3 272 aaKnown RBP16.35■□□□□ 0.21
CUEDC1-213ENST00000585294 RASSF10A6NK89 507 aa16.34■□□□□ 0.21
CUEDC1-213ENST00000585294 PSMD14O00487 310 aa16.34■□□□□ 0.21
CUEDC1-213ENST00000585294 CWF19L2Q2TBE0 894 aaKnown RBP16.34■□□□□ 0.21
CUEDC1-213ENST00000585294 DEFB115Q30KQ5 88 aa16.34■□□□□ 0.21
CUEDC1-213ENST00000585294 TRPM4Q8TD43 1214 aa16.34■□□□□ 0.21
CUEDC1-213ENST00000585294 STK31Q9BXU1 1019 aa16.34■□□□□ 0.21
CUEDC1-213ENST00000585294 CHMP4AQ9BY43 222 aa16.34■□□□□ 0.21
CUEDC1-213ENST00000585294 IL16Q14005 1332 aa16.34■□□□□ 0.21
CUEDC1-213ENST00000585294 LRRC37AA6NMS7 1700 aa16.33■□□□□ 0.21
CUEDC1-213ENST00000585294 WTIPA6NIX2 430 aaPredicted RBP16.33■□□□□ 0.2
CUEDC1-213ENST00000585294 CCDC152Q4G0S7 254 aa16.33■□□□□ 0.2
CUEDC1-213ENST00000585294 FOXN1O15353 648 aa16.32■□□□□ 0.2
CUEDC1-213ENST00000585294 ECE2O60344 883 aa16.32■□□□□ 0.2
CUEDC1-213ENST00000585294 HSP90B1P14625 803 aaKnown RBP16.32■□□□□ 0.2
CUEDC1-213ENST00000585294 DLK2Q6UY11 383 aa16.32■□□□□ 0.2
CUEDC1-213ENST00000585294 SAMD7Q7Z3H4 446 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms