RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 GRM5P41594 1212 aa7.72□□□□□ -1.17
CDH8-213ENST00000584966 ARHGEF25Q86VW2 580 aa7.72□□□□□ -1.17
CDH8-213ENST00000584966 NANOS1Q8WY41 292 aaKnown RBP7.72□□□□□ -1.17
CDH8-213ENST00000584966 SCARF2Q96GP6 870 aaPredicted RBP7.72□□□□□ -1.17
CDH8-213ENST00000584966 CGNL1Q0VF96 1302 aa7.72□□□□□ -1.17
CDH8-213ENST00000584966 NPC1L1Q9UHC9 1359 aa7.71□□□□□ -1.17
CDH8-213ENST00000584966 SPTLC1O15269 473 aa7.71□□□□□ -1.18
CDH8-213ENST00000584966 SLURP2P0DP57 97 aa7.71□□□□□ -1.18
CDH8-213ENST00000584966 ZC3H6P61129 1189 aaKnown RBP7.71□□□□□ -1.18
CDH8-213ENST00000584966 DDX10Q13206 875 aaKnown RBP7.71□□□□□ -1.18
CDH8-213ENST00000584966 COG3Q96JB2 828 aa7.71□□□□□ -1.18
CDH8-213ENST00000584966 KRTAP4-8Q9BYQ9 185 aa7.71□□□□□ -1.18
CDH8-213ENST00000584966 GPCPD1Q9NPB8 672 aa7.71□□□□□ -1.18
CDH8-213ENST00000584966 WNK3Q9BYP7 1800 aa7.71□□□□□ -1.18
CDH8-213ENST00000584966 NSD2O96028 1365 aa7.71□□□□□ -1.18
CDH8-213ENST00000584966 ABCC6O95255 1503 aa7.7□□□□□ -1.18
CDH8-213ENST00000584966 TTLL8A6PVC2 850 aa7.7□□□□□ -1.18
CDH8-213ENST00000584966 NDUFV2P19404 249 aa7.7□□□□□ -1.18
CDH8-213ENST00000584966 FLIIQ13045 1269 aa7.7□□□□□ -1.18
CDH8-213ENST00000584966 AGERQ15109 404 aa7.7□□□□□ -1.18
CDH8-213ENST00000584966 CHRNA2Q15822 529 aa7.7□□□□□ -1.18
CDH8-213ENST00000584966 VWA5B2Q8N398 1253 aa7.7□□□□□ -1.18
CDH8-213ENST00000584966 CCDC155Q8N6L0 562 aa7.7□□□□□ -1.18
CDH8-213ENST00000584966 KCNH5Q8NCM2 988 aa7.7□□□□□ -1.18
CDH8-213ENST00000584966 C8orf37Q96NL8 207 aa7.7□□□□□ -1.18
CDH8-213ENST00000584966 KNSTRNQ9Y448 316 aa7.7□□□□□ -1.18
CDH8-213ENST00000584966 BRWD3Q6RI45 1802 aa7.7□□□□□ -1.18
CDH8-213ENST00000584966 AFF2P51816 1311 aa7.7□□□□□ -1.18
CDH8-213ENST00000584966 AATKQ6ZMQ8 1374 aa7.7□□□□□ -1.18
CDH8-213ENST00000584966 GLI3P10071 1580 aa7.69□□□□□ -1.18
CDH8-213ENST00000584966 EP400Q96L91 3159 aa7.69□□□□□ -1.18
CDH8-213ENST00000584966 CDC14CA4D256 554 aa7.69□□□□□ -1.18
CDH8-213ENST00000584966 MSTNO14793 375 aa7.69□□□□□ -1.18
CDH8-213ENST00000584966 CLCN1P35523 988 aa7.69□□□□□ -1.18
CDH8-213ENST00000584966 POTEAQ6S8J7 498 aa7.69□□□□□ -1.18
CDH8-213ENST00000584966 NGLY1Q96IV0 654 aa7.69□□□□□ -1.18
CDH8-213ENST00000584966 TSEN34Q9BSV6 310 aaKnown RBP7.69□□□□□ -1.18
CDH8-213ENST00000584966 MAP3K19Q56UN5 1328 aa7.69□□□□□ -1.18
CDH8-213ENST00000584966 ATRNO75882 1429 aa7.69□□□□□ -1.18
CDH8-213ENST00000584966 COL5A2P05997 1499 aaPredicted RBP7.68□□□□□ -1.18
CDH8-213ENST00000584966 FAM208AQ9UK61 1670 aaKnown RBP7.68□□□□□ -1.18
CDH8-213ENST00000584966 RRS1Q15050 365 aaKnown RBP7.68□□□□□ -1.18
CDH8-213ENST00000584966 C4orf48Q5BLP8 95 aa7.68□□□□□ -1.18
CDH8-213ENST00000584966 SH3D19Q5HYK7 790 aa7.68□□□□□ -1.18
CDH8-213ENST00000584966 CC2D1BQ5T0F9 858 aaKnown RBP7.68□□□□□ -1.18
CDH8-213ENST00000584966 UNC5CLQ8IV45 518 aa7.68□□□□□ -1.18
CDH8-213ENST00000584966 IP6K1Q92551 441 aa7.68□□□□□ -1.18
CDH8-213ENST00000584966 PRDM11Q9NQV5 511 aa7.68□□□□□ -1.18
CDH8-213ENST00000584966 BTG4Q9NY30 223 aa7.68□□□□□ -1.18
CDH8-213ENST00000584966 POLKQ9UBT6 870 aa7.68□□□□□ -1.18
CDH8-213ENST00000584966 SMG6Q86US8 1419 aaKnown RBP7.68□□□□□ -1.18
CDH8-213ENST00000584966 RGPD1P0DJD0 1748 aa7.67□□□□□ -1.18
CDH8-213ENST00000584966 MTMR2Q13614 643 aa7.67□□□□□ -1.18
CDH8-213ENST00000584966 PLA2G4EQ3MJ16 856 aa7.67□□□□□ -1.18
CDH8-213ENST00000584966 MEX3CQ5U5Q3 659 aaKnown RBP7.67□□□□□ -1.18
CDH8-213ENST00000584966 DESI1Q6ICB0 168 aa7.67□□□□□ -1.18
CDH8-213ENST00000584966 SPIRE2Q8WWL2 714 aa7.67□□□□□ -1.18
CDH8-213ENST00000584966 PCMTD1Q96MG8 357 aaPredicted RBP7.67□□□□□ -1.18
CDH8-213ENST00000584966 USP21Q9UK80 565 aa7.67□□□□□ -1.18
CDH8-213ENST00000584966 EMILIN1Q9Y6C2 1016 aa7.67□□□□□ -1.18
CDH8-213ENST00000584966 MOXD2PA6NHM9 499 aa7.66□□□□□ -1.18
CDH8-213ENST00000584966 FSHRP23945 695 aa7.66□□□□□ -1.18
CDH8-213ENST00000584966 HOXC9P31274 260 aa7.66□□□□□ -1.18
CDH8-213ENST00000584966 VPS72Q15906 364 aa7.66□□□□□ -1.18
CDH8-213ENST00000584966 LYPD4Q6UWN0 246 aa7.66□□□□□ -1.18
CDH8-213ENST00000584966 MORC1Q86VD1 984 aa7.66□□□□□ -1.18
CDH8-213ENST00000584966 SPOCK3Q9BQ16 436 aa7.66□□□□□ -1.18
CDH8-213ENST00000584966 QTRT2Q9H974 415 aaKnown RBP7.66□□□□□ -1.18
CDH8-213ENST00000584966 MAP10Q9P2G4 905 aa7.66□□□□□ -1.18
CDH8-213ENST00000584966 KIF24Q5T7B8 1368 aa7.66□□□□□ -1.18
CDH8-213ENST00000584966 PARD3Q8TEW0 1356 aa7.66□□□□□ -1.18
CDH8-213ENST00000584966 VIRMAQ69YN4 1812 aaKnown RBP7.66□□□□□ -1.18
CDH8-213ENST00000584966 RTL1A6NKG5 1358 aa7.65□□□□□ -1.18
CDH8-213ENST00000584966 INSRP06213 1382 aa7.65□□□□□ -1.18
CDH8-213ENST00000584966 ITGA6P23229 1130 aa7.65□□□□□ -1.18
CDH8-213ENST00000584966 TNNT2P45379 298 aaPredicted RBP7.65□□□□□ -1.18
CDH8-213ENST00000584966 BLMP54132 1417 aaPredicted RBP7.65□□□□□ -1.18
CDH8-213ENST00000584966 HSP90AB2PQ58FF8 381 aa7.65□□□□□ -1.18
CDH8-213ENST00000584966 ZNF772Q68DY9 489 aaPredicted RBP7.65□□□□□ -1.18
CDH8-213ENST00000584966 LARP1Q6PKG0 1096 aaKnown RBP7.65□□□□□ -1.18
CDH8-213ENST00000584966 SV2AQ7L0J3 742 aa7.65□□□□□ -1.18
CDH8-213ENST00000584966 SHANK3Q9BYB0 1731 aa7.65□□□□□ -1.18
CDH8-213ENST00000584966 PARP4Q9UKK3 1724 aaKnown RBP7.65□□□□□ -1.18
CDH8-213ENST00000584966 THSD7AQ9UPZ6 1657 aa7.65□□□□□ -1.18
CDH8-213ENST00000584966 COL3A1P02461 1466 aaPredicted RBP7.64□□□□□ -1.19
CDH8-213ENST00000584966 FLT4P35916 1363 aa7.64□□□□□ -1.19
CDH8-213ENST00000584966 SPATA31A5Q5VU36 1347 aa7.64□□□□□ -1.19
CDH8-213ENST00000584966 SPATA31A7Q8IWB4 1347 aa7.64□□□□□ -1.19
CDH8-213ENST00000584966 WDR17Q8IZU2 1322 aa7.64□□□□□ -1.19
CDH8-213ENST00000584966 ZBTB7CA1YPR0 619 aa7.64□□□□□ -1.19
CDH8-213ENST00000584966 SLC35F4A4IF30 521 aa7.64□□□□□ -1.19
CDH8-213ENST00000584966 SSTR3P32745 418 aaPredicted RBP7.64□□□□□ -1.19
CDH8-213ENST00000584966 MAP3K10Q02779 954 aa7.64□□□□□ -1.19
CDH8-213ENST00000584966 LYPD8Q6UX82 237 aa7.64□□□□□ -1.19
CDH8-213ENST00000584966 GJD4Q96KN9 370 aaPredicted RBP7.64□□□□□ -1.19
CDH8-213ENST00000584966 C1orf115Q9H7X2 142 aa7.64□□□□□ -1.19
CDH8-213ENST00000584966 TRPC5Q9UL62 973 aaPredicted RBP7.64□□□□□ -1.19
CDH8-213ENST00000584966 SBF2Q86WG5 1849 aa7.64□□□□□ -1.19
CDH8-213ENST00000584966 CDK12Q9NYV4 1490 aaPredicted RBP7.63□□□□□ -1.19
CDH8-213ENST00000584966 CRB1P82279 1406 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms