RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 UBE3BQ7Z3V4 1068 aa31.69■■■□□ 2.66
TTC39C-209ENST00000584250 GRAPLQ8TC17 118 aaPredicted RBP31.69■■■□□ 2.66
TTC39C-209ENST00000584250 SEC31BQ9NQW1 1179 aa31.69■■■□□ 2.66
TTC39C-209ENST00000584250 CDHR2Q9BYE9 1310 aa31.69■■■□□ 2.66
TTC39C-209ENST00000584250 H7C1W4 665 aa31.68■■■□□ 2.66
TTC39C-209ENST00000584250 RTKN2Q8IZC4 609 aa31.68■■■□□ 2.66
TTC39C-209ENST00000584250 ATP6V0A2Q9Y487 856 aa31.68■■■□□ 2.66
TTC39C-209ENST00000584250 PDE8AO60658 829 aa31.67■■■□□ 2.66
TTC39C-209ENST00000584250 CASP7P55210 303 aa31.67■■■□□ 2.66
TTC39C-209ENST00000584250 BBOX1O75936 387 aa31.66■■■□□ 2.66
TTC39C-209ENST00000584250 NMRK2Q9NPI5 230 aa31.65■■■□□ 2.66
TTC39C-209ENST00000584250 CC2D2BQ6DHV5 1058 aa31.64■■■□□ 2.66
TTC39C-209ENST00000584250 SLC4A10Q6U841 1118 aa31.64■■■□□ 2.66
TTC39C-209ENST00000584250 COL4A5P29400 1685 aa31.64■■■□□ 2.65
TTC39C-209ENST00000584250 SP8Q8IXZ3 490 aa31.63■■■□□ 2.65
TTC39C-209ENST00000584250 PSMD1Q99460 953 aa31.63■■■□□ 2.65
TTC39C-209ENST00000584250 CTSWP56202 376 aa31.62■■■□□ 2.65
TTC39C-209ENST00000584250 ALDH1L2Q3SY69 923 aa31.62■■■□□ 2.65
TTC39C-209ENST00000584250 SMC4Q9NTJ3 1288 aa31.62■■■□□ 2.65
TTC39C-209ENST00000584250 TTLL11Q8NHH1 800 aa31.61■■■□□ 2.65
TTC39C-209ENST00000584250 MYH3P11055 1940 aa31.61■■■□□ 2.65
TTC39C-209ENST00000584250 LRRC37AA6NMS7 1700 aa31.61■■■□□ 2.65
TTC39C-209ENST00000584250 KIF3CO14782 793 aa31.6■■■□□ 2.65
TTC39C-209ENST00000584250 IARSP41252 1262 aaKnown RBP31.6■■■□□ 2.65
TTC39C-209ENST00000584250 ZC3H4Q9UPT8 1303 aaKnown RBP31.59■■■□□ 2.65
TTC39C-209ENST00000584250 CCDC152Q4G0S7 254 aa31.59■■■□□ 2.65
TTC39C-209ENST00000584250 CT47B1P0C2W7 299 aaPredicted RBP31.58■■■□□ 2.65
TTC39C-209ENST00000584250 HSP90B1P14625 803 aaKnown RBP31.58■■■□□ 2.65
TTC39C-209ENST00000584250 RPS8P62241 208 aaKnown RBP31.58■■■□□ 2.65
TTC39C-209ENST00000584250 GREM2Q9H772 168 aa31.58■■■□□ 2.65
TTC39C-209ENST00000584250 DUOX1Q9NRD9 1551 aa31.57■■■□□ 2.64
TTC39C-209ENST00000584250 GLTPD2A6NH11 291 aa31.57■■■□□ 2.64
TTC39C-209ENST00000584250 RARSP54136 660 aaKnown RBP31.57■■■□□ 2.64
TTC39C-209ENST00000584250 PTPRCP08575 1304 aa31.56■■■□□ 2.64
TTC39C-209ENST00000584250 MPNDQ8N594 471 aa31.56■■■□□ 2.64
TTC39C-209ENST00000584250 PLA2G12BQ9BX93 195 aa31.56■■■□□ 2.64
TTC39C-209ENST00000584250 SRCIN1Q9C0H9 1055 aa31.56■■■□□ 2.64
TTC39C-209ENST00000584250 RRAGCQ9HB90 399 aa31.55■■■□□ 2.64
TTC39C-209ENST00000584250 ZBED9Q6R2W3 1325 aa31.54■■■□□ 2.64
TTC39C-209ENST00000584250 KDM2BQ8NHM5 1336 aa31.54■■■□□ 2.64
TTC39C-209ENST00000584250 ZNF541Q9H0D2 1346 aa31.54■■■□□ 2.64
TTC39C-209ENST00000584250 ALDH1L1O75891 902 aa31.54■■■□□ 2.64
TTC39C-209ENST00000584250 GRIPAP1Q4V328 841 aa31.54■■■□□ 2.64
TTC39C-209ENST00000584250 EPHA10Q5JZY3 1008 aa31.54■■■□□ 2.64
TTC39C-209ENST00000584250 DPP8Q6V1X1 898 aaPredicted RBP31.54■■■□□ 2.64
TTC39C-209ENST00000584250 RTFDC1Q9BY42 306 aaPredicted RBP31.54■■■□□ 2.64
TTC39C-209ENST00000584250 GRM8O00222 908 aa31.53■■■□□ 2.64
TTC39C-209ENST00000584250 DDNO94850 711 aaPredicted RBP31.53■■■□□ 2.64
TTC39C-209ENST00000584250 GPSM2P81274 684 aa31.53■■■□□ 2.64
TTC39C-209ENST00000584250 AOC3Q16853 763 aa31.53■■■□□ 2.64
TTC39C-209ENST00000584250 TMC4Q7Z404 712 aa31.53■■■□□ 2.64
TTC39C-209ENST00000584250 TMX4Q9H1E5 349 aaPredicted RBP31.53■■■□□ 2.64
TTC39C-209ENST00000584250 NOB1Q9ULX3 412 aaKnown RBP31.53■■■□□ 2.64
TTC39C-209ENST00000584250 SPEF2Q9C093 1822 aa31.52■■■□□ 2.64
TTC39C-209ENST00000584250 FOXO4P98177 505 aa31.52■■■□□ 2.64
TTC39C-209ENST00000584250 CSF1RP07333 972 aa31.51■■■□□ 2.63
TTC39C-209ENST00000584250 FAM161AQ3B820 660 aa31.51■■■□□ 2.63
TTC39C-209ENST00000584250 NSFL1CQ9UNZ2 370 aaKnown RBP31.51■■■□□ 2.63
TTC39C-209ENST00000584250 LTBP1Q14766 1721 aa31.51■■■□□ 2.63
TTC39C-209ENST00000584250 POTECB2RU33 542 aa31.5■■■□□ 2.63
TTC39C-209ENST00000584250 PPIP5K2O43314 1243 aa31.5■■■□□ 2.63
TTC39C-209ENST00000584250 LARGE2Q8N3Y3 721 aa31.5■■■□□ 2.63
TTC39C-209ENST00000584250 C9orf78Q9NZ63 289 aaPredicted RBP31.5■■■□□ 2.63
TTC39C-209ENST00000584250 RTL9Q8NET4 1388 aa31.49■■■□□ 2.63
TTC39C-209ENST00000584250 FZD9O00144 591 aa31.49■■■□□ 2.63
TTC39C-209ENST00000584250 NBPF7P0C2Y1 421 aaPredicted RBP31.49■■■□□ 2.63
TTC39C-209ENST00000584250 BRPF1P55201 1214 aaPredicted RBP31.49■■■□□ 2.63
TTC39C-209ENST00000584250 C1QTNF8P60827 252 aa31.49■■■□□ 2.63
TTC39C-209ENST00000584250 ANKRD18AQ8IVF6 992 aa31.49■■■□□ 2.63
TTC39C-209ENST00000584250 GPR101Q96P66 508 aaPredicted RBP31.49■■■□□ 2.63
TTC39C-209ENST00000584250 POLLQ9UGP5 575 aa31.49■■■□□ 2.63
TTC39C-209ENST00000584250 BCAR3O75815 825 aa31.48■■■□□ 2.63
TTC39C-209ENST00000584250 DPY19L2Q6NUT2 758 aa31.48■■■□□ 2.63
TTC39C-209ENST00000584250 KAZALD1Q96I82 304 aa31.47■■■□□ 2.63
TTC39C-209ENST00000584250 SUCLG2Q96I99 432 aa31.47■■■□□ 2.63
TTC39C-209ENST00000584250 WDR90Q96KV7 1748 aa31.46■■■□□ 2.63
TTC39C-209ENST00000584250 WTIPA6NIX2 430 aaPredicted RBP31.46■■■□□ 2.63
TTC39C-209ENST00000584250 ITGA6P23229 1130 aa31.46■■■□□ 2.63
TTC39C-209ENST00000584250 JDP2Q8WYK2 163 aa31.46■■■□□ 2.63
TTC39C-209ENST00000584250 SUPT20HQ8NEM7 779 aa31.45■■■□□ 2.63
TTC39C-209ENST00000584250 CDC5LQ99459 802 aaKnown RBP31.45■■■□□ 2.63
TTC39C-209ENST00000584250 TNNQ9UQP3 1299 aa31.45■■■□□ 2.63
TTC39C-209ENST00000584250 KIAA2012Q0VF49 1180 aa31.44■■■□□ 2.62
TTC39C-209ENST00000584250 LMBR1LQ6UX01 489 aa31.44■■■□□ 2.62
TTC39C-209ENST00000584250 UTYO14607 1347 aa31.44■■■□□ 2.62
TTC39C-209ENST00000584250 NIM1KQ8IY84 436 aa31.43■■■□□ 2.62
TTC39C-209ENST00000584250 TBC1D16Q8TBP0 767 aa31.43■■■□□ 2.62
TTC39C-209ENST00000584250 USP44Q9H0E7 712 aa31.43■■■□□ 2.62
TTC39C-209ENST00000584250 C6orf229H3BNL8 230 aa31.42■■■□□ 2.62
TTC39C-209ENST00000584250 RIMBP2O15034 1052 aa31.42■■■□□ 2.62
TTC39C-209ENST00000584250 CHMP3Q9Y3E7 222 aa31.42■■■□□ 2.62
TTC39C-209ENST00000584250 BSDC1Q9NW68 430 aaPredicted RBP31.41■■■□□ 2.62
TTC39C-209ENST00000584250 PODXL2Q9NZ53 605 aa31.41■■■□□ 2.62
TTC39C-209ENST00000584250 ANKIB1Q9P2G1 1089 aa31.41■■■□□ 2.62
TTC39C-209ENST00000584250 MINPP1Q9UNW1 487 aa31.41■■■□□ 2.62
TTC39C-209ENST00000584250 VEGFAP15692 232 aaPredicted RBP31.4■■■□□ 2.62
TTC39C-209ENST00000584250 VPS33BQ9H267 617 aa31.4■■■□□ 2.62
TTC39C-209ENST00000584250 UFL1O94874 794 aa31.39■■■□□ 2.62
TTC39C-209ENST00000584250 ZNF594Q96JF6 807 aaPredicted RBP31.39■■■□□ 2.62
TTC39C-209ENST00000584250 API5Q9BZZ5 524 aaKnown RBP31.39■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms