RNA–Protein interactions for RNA: ENST00000583697.1

CDK5RAP3-229, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-229ENST00000583697 TMC4Q7Z404 712 aa11.29□□□□□ -0.6
CDK5RAP3-229ENST00000583697 MPNDQ8N594 471 aa11.29□□□□□ -0.6
CDK5RAP3-229ENST00000583697 MBIPQ9NS73 344 aa11.29□□□□□ -0.6
CDK5RAP3-229ENST00000583697 HYPKQ9NX55 129 aa11.29□□□□□ -0.6
CDK5RAP3-229ENST00000583697 ABT1Q9ULW3 272 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-229ENST00000583697 ITGBL1O95965 494 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-229ENST00000583697 GNAI1P63096 354 aa11.28□□□□□ -0.6
CDK5RAP3-229ENST00000583697 DUSP27Q5VZP5 1158 aa11.28□□□□□ -0.6
CDK5RAP3-229ENST00000583697 USP50Q70EL3 339 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-229ENST00000583697 SP8Q8IXZ3 490 aa11.28□□□□□ -0.6
CDK5RAP3-229ENST00000583697 ZNF428Q96B54 188 aa11.28□□□□□ -0.6
CDK5RAP3-229ENST00000583697 AIDAQ96BJ3 306 aa11.28□□□□□ -0.6
CDK5RAP3-229ENST00000583697 IFT57Q9NWB7 429 aa11.28□□□□□ -0.6
CDK5RAP3-229ENST00000583697 ZNRF3Q9ULT6 936 aa11.28□□□□□ -0.6
CDK5RAP3-229ENST00000583697 CDHR2Q9BYE9 1310 aa11.28□□□□□ -0.6
CDK5RAP3-229ENST00000583697 ATP5J2-PTCD1G3V325 749 aa11.27□□□□□ -0.61
CDK5RAP3-229ENST00000583697 EPS15P42566 896 aa11.27□□□□□ -0.61
CDK5RAP3-229ENST00000583697 KIAA2012Q0VF49 1180 aa11.27□□□□□ -0.61
CDK5RAP3-229ENST00000583697 RTL5Q5HYW3 569 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-229ENST00000583697 RIC3Q7Z5B4 369 aa11.27□□□□□ -0.61
CDK5RAP3-229ENST00000583697 FAM89AQ96GI7 184 aa11.27□□□□□ -0.61
CDK5RAP3-229ENST00000583697 BCL2L13Q9BXK5 485 aa11.27□□□□□ -0.61
CDK5RAP3-229ENST00000583697 RTFDC1Q9BY42 306 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-229ENST00000583697 ADARB2Q9NS39 739 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-229ENST00000583697 GPRC5DQ9NZD1 345 aa11.27□□□□□ -0.61
CDK5RAP3-229ENST00000583697 SPEF2Q9C093 1822 aa11.26□□□□□ -0.61
CDK5RAP3-229ENST00000583697 RASSF10A6NK89 507 aa11.26□□□□□ -0.61
CDK5RAP3-229ENST00000583697 APAF1O14727 1248 aa11.26□□□□□ -0.61
CDK5RAP3-229ENST00000583697 CAPN15O75808 1086 aa11.26□□□□□ -0.61
CDK5RAP3-229ENST00000583697 CIAPIN1Q6FI81 312 aa11.26□□□□□ -0.61
CDK5RAP3-229ENST00000583697 PAXIP1Q6ZW49 1069 aaPredicted RBP11.26□□□□□ -0.61
CDK5RAP3-229ENST00000583697 ISCA1Q9BUE6 129 aa11.26□□□□□ -0.61
CDK5RAP3-229ENST00000583697 COL4A1P02462 1669 aa11.26□□□□□ -0.61
CDK5RAP3-229ENST00000583697 MYH3P11055 1940 aa11.25□□□□□ -0.61
CDK5RAP3-229ENST00000583697 IRS4O14654 1257 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-229ENST00000583697 DDX58O95786 925 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-229ENST00000583697 HSP90B1P14625 803 aaKnown RBP11.25□□□□□ -0.61
CDK5RAP3-229ENST00000583697 VEGFBP49765 207 aa11.25□□□□□ -0.61
CDK5RAP3-229ENST00000583697 GMPSP49915 693 aaPredicted RBP11.25□□□□□ -0.61
CDK5RAP3-229ENST00000583697 CXCL9Q07325 125 aa11.25□□□□□ -0.61
CDK5RAP3-229ENST00000583697 TNIP1Q15025 636 aa11.25□□□□□ -0.61
CDK5RAP3-229ENST00000583697 DEFB115Q30KQ5 88 aa11.25□□□□□ -0.61
CDK5RAP3-229ENST00000583697 CHMP4AQ9BY43 222 aa11.25□□□□□ -0.61
CDK5RAP3-229ENST00000583697 ELL2O00472 640 aaPredicted RBP11.24□□□□□ -0.61
CDK5RAP3-229ENST00000583697 FOXN1O15353 648 aa11.24□□□□□ -0.61
CDK5RAP3-229ENST00000583697 RAD17O75943 681 aa11.24□□□□□ -0.61
CDK5RAP3-229ENST00000583697 SF3B3Q15393 1217 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-229ENST00000583697 CELF1Q92879 486 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-229ENST00000583697 EYA3Q99504 573 aa11.24□□□□□ -0.61
CDK5RAP3-229ENST00000583697 MYD88Q99836 296 aa11.24□□□□□ -0.61
CDK5RAP3-229ENST00000583697 NSFL1CQ9UNZ2 370 aaKnown RBP11.24□□□□□ -0.61
CDK5RAP3-229ENST00000583697 C6orf229H3BNL8 230 aa11.23□□□□□ -0.61
CDK5RAP3-229ENST00000583697 ZNF853P0CG23 659 aa11.23□□□□□ -0.61
CDK5RAP3-229ENST00000583697 ECE1P42892 770 aa11.23□□□□□ -0.61
CDK5RAP3-229ENST00000583697 CTCFP49711 727 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-229ENST00000583697 GRM1Q13255 1194 aa11.23□□□□□ -0.61
CDK5RAP3-229ENST00000583697 WASHC4Q2M389 1173 aa11.23□□□□□ -0.61
CDK5RAP3-229ENST00000583697 CCDC30Q5VVM6 783 aa11.23□□□□□ -0.61
CDK5RAP3-229ENST00000583697 ZBTB38Q8NAP3 1195 aaPredicted RBP11.23□□□□□ -0.61
CDK5RAP3-229ENST00000583697 PHAXQ9H814 394 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-229ENST00000583697 WDR33Q9C0J8 1336 aaKnown RBP11.23□□□□□ -0.61
CDK5RAP3-229ENST00000583697 PSME4Q14997 1843 aa11.23□□□□□ -0.61
CDK5RAP3-229ENST00000583697 TRAF5O00463 557 aa11.22□□□□□ -0.61
CDK5RAP3-229ENST00000583697 MAP2K1Q02750 393 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-229ENST00000583697 TRIM28Q13263 835 aaKnown RBP11.22□□□□□ -0.61
CDK5RAP3-229ENST00000583697 CCDC152Q4G0S7 254 aa11.22□□□□□ -0.61
CDK5RAP3-229ENST00000583697 CCDC191Q8NCU4 936 aa11.22□□□□□ -0.61
CDK5RAP3-229ENST00000583697 DBNDD1Q9H9R9 158 aa11.22□□□□□ -0.61
CDK5RAP3-229ENST00000583697 CWC25Q9NXE8 425 aaPredicted RBP11.22□□□□□ -0.61
CDK5RAP3-229ENST00000583697 YDJCA8MPS7 323 aa11.21□□□□□ -0.61
CDK5RAP3-229ENST00000583697 G3V3G9 751 aa11.21□□□□□ -0.61
CDK5RAP3-229ENST00000583697 H7C1D1 291 aa11.21□□□□□ -0.61
CDK5RAP3-229ENST00000583697 RIMBP2O15034 1052 aa11.21□□□□□ -0.61
CDK5RAP3-229ENST00000583697 PDE8AO60658 829 aa11.21□□□□□ -0.61
CDK5RAP3-229ENST00000583697 DCAF8Q5TAQ9 597 aa11.21□□□□□ -0.61
CDK5RAP3-229ENST00000583697 MICALL2Q8IY33 904 aa11.21□□□□□ -0.61
CDK5RAP3-229ENST00000583697 BEGAINQ9BUH8 593 aa11.21□□□□□ -0.61
CDK5RAP3-229ENST00000583697 STK31Q9BXU1 1019 aa11.21□□□□□ -0.61
CDK5RAP3-229ENST00000583697 ZNF408Q9H9D4 720 aa11.21□□□□□ -0.61
CDK5RAP3-229ENST00000583697 PRDM10Q9NQV6 1147 aa11.21□□□□□ -0.61
CDK5RAP3-229ENST00000583697 ECE2O60344 883 aa11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 CELF2O95319 508 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 PCCAP05165 728 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 GPSM2P81274 684 aa11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 FMR1Q06787 632 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 NEXNQ0ZGT2 675 aa11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 CYP4F22Q6NT55 531 aa11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 C8orf58Q8NAV2 365 aa11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 TRPM4Q8TD43 1214 aa11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 ZC3H15Q8WU90 426 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 CAPNS2Q96L46 248 aa11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 METTL22Q9BUU2 404 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 GLIS2Q9BZE0 524 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 ANKIB1Q9P2G1 1089 aa11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 CNOT7Q9UIV1 285 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 TLL2Q9Y6L7 1015 aa11.2□□□□□ -0.62
CDK5RAP3-229ENST00000583697 PSMD14O00487 310 aa11.19□□□□□ -0.62
CDK5RAP3-229ENST00000583697 UFL1O94874 794 aa11.19□□□□□ -0.62
CDK5RAP3-229ENST00000583697 RPS12P25398 132 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-229ENST00000583697 RPS8P62241 208 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms