RNA–Protein interactions for RNA: ENST00000583577.1

MKS1-212, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-212ENST00000583577 PGAP2Q9UHJ9 254 aa12.61□□□□□ -0.39
MKS1-212ENST00000583577 ADAMTS8Q9UP79 889 aa12.61□□□□□ -0.39
MKS1-212ENST00000583577 COLQQ9Y215 455 aaPredicted RBP12.61□□□□□ -0.39
MKS1-212ENST00000583577 SNED1Q8TER0 1413 aa12.61□□□□□ -0.39
MKS1-212ENST00000583577 MRC1P22897 1456 aa12.6□□□□□ -0.39
MKS1-212ENST00000583577 A1BGP04217 495 aa12.6□□□□□ -0.39
MKS1-212ENST00000583577 HIRAP54198 1017 aaPredicted RBP12.6□□□□□ -0.39
MKS1-212ENST00000583577 DZIP3Q86Y13 1208 aaKnown RBP12.6□□□□□ -0.39
MKS1-212ENST00000583577 C2orf69Q8N8R5 385 aa12.6□□□□□ -0.39
MKS1-212ENST00000583577 TRPM4Q8TD43 1214 aa12.6□□□□□ -0.39
MKS1-212ENST00000583577 DDRGK1Q96HY6 314 aa12.6□□□□□ -0.39
MKS1-212ENST00000583577 GBA2Q9HCG7 927 aaPredicted RBP12.6□□□□□ -0.39
MKS1-212ENST00000583577 PAPPA2Q9BXP8 1791 aa12.6□□□□□ -0.39
MKS1-212ENST00000583577 NFE2L2Q16236 605 aa12.59□□□□□ -0.39
MKS1-212ENST00000583577 NCBP3Q53F19 620 aaKnown RBP12.59□□□□□ -0.39
MKS1-212ENST00000583577 TPTE2Q6XPS3 522 aa12.59□□□□□ -0.39
MKS1-212ENST00000583577 CCDC146Q8IYE0 955 aa12.59□□□□□ -0.39
MKS1-212ENST00000583577 ZC3H15Q8WU90 426 aaKnown RBP12.59□□□□□ -0.39
MKS1-212ENST00000583577 ZNF296Q8WUU4 475 aaPredicted RBP12.59□□□□□ -0.39
MKS1-212ENST00000583577 RUNDC1Q96C34 613 aa12.59□□□□□ -0.39
MKS1-212ENST00000583577 BCL2L13Q9BXK5 485 aa12.59□□□□□ -0.39
MKS1-212ENST00000583577 PPIP5K2O43314 1243 aa12.58□□□□□ -0.4
MKS1-212ENST00000583577 HTATSF1O43719 755 aaKnown RBP12.58□□□□□ -0.4
MKS1-212ENST00000583577 TEFQ10587 303 aa12.58□□□□□ -0.4
MKS1-212ENST00000583577 AAMPQ13685 434 aa12.58□□□□□ -0.4
MKS1-212ENST00000583577 FBXO46Q6PJ61 603 aaPredicted RBP12.58□□□□□ -0.4
MKS1-212ENST00000583577 SLC51AQ86UW1 340 aa12.58□□□□□ -0.4
MKS1-212ENST00000583577 POTEFA5A3E0 1075 aa12.57□□□□□ -0.4
MKS1-212ENST00000583577 TBC1D8O95759 1140 aa12.57□□□□□ -0.4
MKS1-212ENST00000583577 SLC10A3P09131 477 aa12.57□□□□□ -0.4
MKS1-212ENST00000583577 GTF2E1P29083 439 aaPredicted RBP12.57□□□□□ -0.4
MKS1-212ENST00000583577 CXCL9Q07325 125 aa12.57□□□□□ -0.4
MKS1-212ENST00000583577 AOC3Q16853 763 aa12.57□□□□□ -0.4
MKS1-212ENST00000583577 CC2D2BQ6DHV5 1058 aa12.57□□□□□ -0.4
MKS1-212ENST00000583577 SHTN1A0MZ66 631 aa12.56□□□□□ -0.4
MKS1-212ENST00000583577 PIP4K2AP48426 406 aaPredicted RBP12.56□□□□□ -0.4
MKS1-212ENST00000583577 IL17REQ8NFR9 667 aa12.56□□□□□ -0.4
MKS1-212ENST00000583577 ZNF496Q96IT1 587 aaPredicted RBP12.56□□□□□ -0.4
MKS1-212ENST00000583577 TEX13AQ9BXU3 409 aaPredicted RBP12.56□□□□□ -0.4
MKS1-212ENST00000583577 NIP7Q9Y221 180 aaKnown RBP eCLIP12.56□□□□□ -0.4
MKS1-212ENST00000583577 ZNF521Q96K83 1311 aa12.56□□□□□ -0.4
MKS1-212ENST00000583577 RBBP6Q7Z6E9 1792 aaKnown RBP12.56□□□□□ -0.4
MKS1-212ENST00000583577 CEMIPQ8WUJ3 1361 aa12.56□□□□□ -0.4
MKS1-212ENST00000583577 HEG1Q9ULI3 1381 aa12.56□□□□□ -0.4
MKS1-212ENST00000583577 TMPOP42166 694 aaKnown RBP12.55□□□□□ -0.4
MKS1-212ENST00000583577 RIPK4P57078 832 aa12.55□□□□□ -0.4
MKS1-212ENST00000583577 LMOD3Q0VAK6 560 aa12.55□□□□□ -0.4
MKS1-212ENST00000583577 CENPQQ7L2Z9 268 aaPredicted RBP12.55□□□□□ -0.4
MKS1-212ENST00000583577 MCM10Q7L590 875 aa12.55□□□□□ -0.4
MKS1-212ENST00000583577 KRT26Q7Z3Y9 468 aa12.55□□□□□ -0.4
MKS1-212ENST00000583577 BACH2Q9BYV9 841 aa12.55□□□□□ -0.4
MKS1-212ENST00000583577 CNOT7Q9UIV1 285 aaKnown RBP12.55□□□□□ -0.4
MKS1-212ENST00000583577 ZNRF3Q9ULT6 936 aa12.55□□□□□ -0.4
MKS1-212ENST00000583577 ZNF652Q9Y2D9 606 aa12.55□□□□□ -0.4
MKS1-212ENST00000583577 ADM5C9JUS6 153 aa12.54□□□□□ -0.4
MKS1-212ENST00000583577 RAD17O75943 681 aa12.54□□□□□ -0.4
MKS1-212ENST00000583577 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
MKS1-212ENST00000583577 NEUROD2Q15784 382 aa12.54□□□□□ -0.4
MKS1-212ENST00000583577 RTL5Q5HYW3 569 aaPredicted RBP12.54□□□□□ -0.4
MKS1-212ENST00000583577 CLEC4GQ6UXB4 293 aa12.54□□□□□ -0.4
MKS1-212ENST00000583577 EXOC6Q8TAG9 804 aa12.54□□□□□ -0.4
MKS1-212ENST00000583577 RPGRQ92834 1020 aaKnown RBP12.54□□□□□ -0.4
MKS1-212ENST00000583577 UNC80Q8N2C7 3258 aa12.54□□□□□ -0.4
MKS1-212ENST00000583577 H7C1D1 291 aa12.53□□□□□ -0.4
MKS1-212ENST00000583577 DCTN1Q14203 1278 aa12.53□□□□□ -0.4
MKS1-212ENST00000583577 GRIPAP1Q4V328 841 aa12.53□□□□□ -0.4
MKS1-212ENST00000583577 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
MKS1-212ENST00000583577 BCL11AQ9H165 835 aa12.53□□□□□ -0.4
MKS1-212ENST00000583577 RRP7AQ9Y3A4 280 aaKnown RBP12.53□□□□□ -0.4
MKS1-212ENST00000583577 KDM3BQ7LBC6 1761 aa12.53□□□□□ -0.4
MKS1-212ENST00000583577 APAF1O14727 1248 aa12.52□□□□□ -0.41
MKS1-212ENST00000583577 PPEF1O14829 653 aaPredicted RBP12.52□□□□□ -0.41
MKS1-212ENST00000583577 PDE4AP27815 886 aa12.52□□□□□ -0.41
MKS1-212ENST00000583577 SAMD7Q7Z3H4 446 aa12.52□□□□□ -0.41
MKS1-212ENST00000583577 RASAL3Q86YV0 1011 aa12.52□□□□□ -0.41
MKS1-212ENST00000583577 CDHR2Q9BYE9 1310 aa12.52□□□□□ -0.41
MKS1-212ENST00000583577 NUP98P52948 1817 aa12.51□□□□□ -0.41
MKS1-212ENST00000583577 BTBD11A6QL63 1104 aa12.51□□□□□ -0.41
MKS1-212ENST00000583577 GPR25O00155 361 aa12.51□□□□□ -0.41
MKS1-212ENST00000583577 TNIP1Q15025 636 aa12.51□□□□□ -0.41
MKS1-212ENST00000583577 TAF7Q15545 349 aaPredicted RBP12.51□□□□□ -0.41
MKS1-212ENST00000583577 CRY2Q49AN0 593 aa12.51□□□□□ -0.41
MKS1-212ENST00000583577 TBC1D10BQ4KMP7 808 aaPredicted RBP12.51□□□□□ -0.41
MKS1-212ENST00000583577 ZNF790Q6PG37 636 aa12.51□□□□□ -0.41
MKS1-212ENST00000583577 NUTM1Q86Y26 1132 aa12.51□□□□□ -0.41
MKS1-212ENST00000583577 MICALL2Q8IY33 904 aa12.51□□□□□ -0.41
MKS1-212ENST00000583577 TRMT2AQ8IZ69 625 aaKnown RBP12.51□□□□□ -0.41
MKS1-212ENST00000583577 DCPSQ96C86 337 aaKnown RBP12.51□□□□□ -0.41
MKS1-212ENST00000583577 ABCC12Q96J65 1359 aa12.51□□□□□ -0.41
MKS1-212ENST00000583577 EN2P19622 333 aaPredicted RBP12.5□□□□□ -0.41
MKS1-212ENST00000583577 FMNL2Q96PY5 1086 aa12.5□□□□□ -0.41
MKS1-212ENST00000583577 TMX4Q9H1E5 349 aaPredicted RBP12.5□□□□□ -0.41
MKS1-212ENST00000583577 E9PSI1 815 aa12.49□□□□□ -0.41
MKS1-212ENST00000583577 FKTNO75072 461 aa12.49□□□□□ -0.41
MKS1-212ENST00000583577 RBM26Q5T8P6 1007 aaKnown RBP12.49□□□□□ -0.41
MKS1-212ENST00000583577 DUSP27Q5VZP5 1158 aa12.49□□□□□ -0.41
MKS1-212ENST00000583577 INTS3Q68E01 1043 aaKnown RBP12.49□□□□□ -0.41
MKS1-212ENST00000583577 RBM17Q96I25 401 aaKnown RBP12.49□□□□□ -0.41
MKS1-212ENST00000583577 THUMPD2Q9BTF0 503 aaKnown RBP12.49□□□□□ -0.41
MKS1-212ENST00000583577 LAMA3Q16787 3333 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms