RNA–Protein interactions for RNA: ENST00000583213.1

TNFAIP1-206, Transcript of TNF alpha induced protein 1, humanhuman

TSL 3

Gene TNFAIP1, Length 582 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-206ENST00000583213 USP50Q70EL3 339 aaPredicted RBP20.96■□□□□ 0.95
TNFAIP1-206ENST00000583213 MBIPQ9NS73 344 aa20.96■□□□□ 0.95
TNFAIP1-206ENST00000583213 ZNRF3Q9ULT6 936 aa20.96■□□□□ 0.95
TNFAIP1-206ENST00000583213 DDX46Q7L014 1031 aaKnown RBP20.95■□□□□ 0.94
TNFAIP1-206ENST00000583213 HYPKQ9NX55 129 aa20.95■□□□□ 0.94
TNFAIP1-206ENST00000583213 LAS1LQ9Y4W2 734 aaKnown RBP20.95■□□□□ 0.94
TNFAIP1-206ENST00000583213 THSD7BQ9C0I4 1608 aa20.95■□□□□ 0.94
TNFAIP1-206ENST00000583213 CDHR2Q9BYE9 1310 aa20.95■□□□□ 0.94
TNFAIP1-206ENST00000583213 VEGFBP49765 207 aa20.94■□□□□ 0.94
TNFAIP1-206ENST00000583213 CXCL9Q07325 125 aa20.94■□□□□ 0.94
TNFAIP1-206ENST00000583213 SF3B3Q15393 1217 aaKnown RBP20.94■□□□□ 0.94
TNFAIP1-206ENST00000583213 DUSP27Q5VZP5 1158 aa20.94■□□□□ 0.94
TNFAIP1-206ENST00000583213 DPP8Q6V1X1 898 aaPredicted RBP20.94■□□□□ 0.94
TNFAIP1-206ENST00000583213 TNS4Q8IZW8 715 aa20.94■□□□□ 0.94
TNFAIP1-206ENST00000583213 MPNDQ8N594 471 aa20.94■□□□□ 0.94
TNFAIP1-206ENST00000583213 IFT57Q9NWB7 429 aa20.94■□□□□ 0.94
TNFAIP1-206ENST00000583213 GPRC5DQ9NZD1 345 aa20.94■□□□□ 0.94
TNFAIP1-206ENST00000583213 TRPM7Q96QT4 1865 aa20.93■□□□□ 0.94
TNFAIP1-206ENST00000583213 COL4A1P02462 1669 aa20.93■□□□□ 0.94
TNFAIP1-206ENST00000583213 ADARB2Q9NS39 739 aaKnown RBP20.92■□□□□ 0.94
TNFAIP1-206ENST00000583213 FOXN1O15353 648 aa20.9■□□□□ 0.94
TNFAIP1-206ENST00000583213 CALD1Q05682 793 aaKnown RBP20.9■□□□□ 0.94
TNFAIP1-206ENST00000583213 FAM89AQ96GI7 184 aa20.9■□□□□ 0.94
TNFAIP1-206ENST00000583213 WBP1LQ9NX94 342 aa20.9■□□□□ 0.94
TNFAIP1-206ENST00000583213 PGAP2Q9UHJ9 254 aa20.9■□□□□ 0.94
TNFAIP1-206ENST00000583213 APAF1O14727 1248 aa20.89■□□□□ 0.93
TNFAIP1-206ENST00000583213 DEFB115Q30KQ5 88 aa20.89■□□□□ 0.93
TNFAIP1-206ENST00000583213 PRDM10Q9NQV6 1147 aa20.89■□□□□ 0.93
TNFAIP1-206ENST00000583213 YDJCA8MPS7 323 aa20.88■□□□□ 0.93
TNFAIP1-206ENST00000583213 ATP5J2-PTCD1G3V325 749 aa20.88■□□□□ 0.93
TNFAIP1-206ENST00000583213 GMPSP49915 693 aaPredicted RBP20.88■□□□□ 0.93
TNFAIP1-206ENST00000583213 GNAI1P63096 354 aa20.88■□□□□ 0.93
TNFAIP1-206ENST00000583213 CIAPIN1Q6FI81 312 aa20.88■□□□□ 0.93
TNFAIP1-206ENST00000583213 TNIP1Q15025 636 aa20.87■□□□□ 0.93
TNFAIP1-206ENST00000583213 CST9Q5W186 159 aa20.87■□□□□ 0.93
TNFAIP1-206ENST00000583213 CELF1Q92879 486 aaKnown RBP20.87■□□□□ 0.93
TNFAIP1-206ENST00000583213 ZBTB38Q8NAP3 1195 aaPredicted RBP20.86■□□□□ 0.93
TNFAIP1-206ENST00000583213 ZC3H15Q8WU90 426 aaKnown RBP20.86■□□□□ 0.93
TNFAIP1-206ENST00000583213 WDR33Q9C0J8 1336 aaKnown RBP20.85■□□□□ 0.93
TNFAIP1-206ENST00000583213 IRS4O14654 1257 aaPredicted RBP20.85■□□□□ 0.93
TNFAIP1-206ENST00000583213 CTCFP49711 727 aaPredicted RBP20.85■□□□□ 0.93
TNFAIP1-206ENST00000583213 FMR1Q06787 632 aaKnown RBP eCLIP20.85■□□□□ 0.93
TNFAIP1-206ENST00000583213 TRAF5O00463 557 aa20.84■□□□□ 0.93
TNFAIP1-206ENST00000583213 RAD17O75943 681 aa20.84■□□□□ 0.93
TNFAIP1-206ENST00000583213 GOLGA2Q08379 1002 aa20.84■□□□□ 0.93
TNFAIP1-206ENST00000583213 PHAXQ9H814 394 aaKnown RBP20.84■□□□□ 0.93
TNFAIP1-206ENST00000583213 ABT1Q9ULW3 272 aaKnown RBP20.84■□□□□ 0.93
TNFAIP1-206ENST00000583213 HIRAP54198 1017 aaPredicted RBP20.83■□□□□ 0.93
TNFAIP1-206ENST00000583213 C8orf58Q8NAV2 365 aa20.83■□□□□ 0.93
TNFAIP1-206ENST00000583213 CCDC191Q8NCU4 936 aa20.83■□□□□ 0.93
TNFAIP1-206ENST00000583213 DPF2Q92785 391 aa20.83■□□□□ 0.93
TNFAIP1-206ENST00000583213 ZNF428Q96B54 188 aa20.83■□□□□ 0.93
TNFAIP1-206ENST00000583213 AIDAQ96BJ3 306 aa20.83■□□□□ 0.93
TNFAIP1-206ENST00000583213 POLLQ9UGP5 575 aa20.83■□□□□ 0.93
TNFAIP1-206ENST00000583213 TLL2Q9Y6L7 1015 aa20.83■□□□□ 0.93
TNFAIP1-206ENST00000583213 HSP90B1P14625 803 aaKnown RBP20.82■□□□□ 0.92
TNFAIP1-206ENST00000583213 RPS8P62241 208 aaKnown RBP20.82■□□□□ 0.92
TNFAIP1-206ENST00000583213 GPSM2P81274 684 aa20.82■□□□□ 0.92
TNFAIP1-206ENST00000583213 WASHC4Q2M389 1173 aa20.82■□□□□ 0.92
TNFAIP1-206ENST00000583213 RIC3Q7Z5B4 369 aa20.82■□□□□ 0.92
TNFAIP1-206ENST00000583213 CHMP4AQ9BY43 222 aa20.82■□□□□ 0.92
TNFAIP1-206ENST00000583213 PODXL2Q9NZ53 605 aa20.82■□□□□ 0.92
TNFAIP1-206ENST00000583213 NSFL1CQ9UNZ2 370 aaKnown RBP20.82■□□□□ 0.92
TNFAIP1-206ENST00000583213 ZNF609O15014 1411 aa20.81■□□□□ 0.92
TNFAIP1-206ENST00000583213 PCCAP05165 728 aaPredicted RBP20.81■□□□□ 0.92
TNFAIP1-206ENST00000583213 MAP2K1Q02750 393 aaPredicted RBP20.81■□□□□ 0.92
TNFAIP1-206ENST00000583213 TRPM4Q8TD43 1214 aa20.81■□□□□ 0.92
TNFAIP1-206ENST00000583213 ECE1P42892 770 aa20.8■□□□□ 0.92
TNFAIP1-206ENST00000583213 CCDC27Q2M243 656 aa20.8■□□□□ 0.92
TNFAIP1-206ENST00000583213 TBC1D16Q8TBP0 767 aa20.8■□□□□ 0.92
TNFAIP1-206ENST00000583213 HHIPL1Q96JK4 782 aa20.8■□□□□ 0.92
TNFAIP1-206ENST00000583213 CAPNS2Q96L46 248 aa20.8■□□□□ 0.92
TNFAIP1-206ENST00000583213 METTL22Q9BUU2 404 aaPredicted RBP20.8■□□□□ 0.92
TNFAIP1-206ENST00000583213 BCL2L13Q9BXK5 485 aa20.8■□□□□ 0.92
TNFAIP1-206ENST00000583213 CNOT7Q9UIV1 285 aaKnown RBP20.8■□□□□ 0.92
TNFAIP1-206ENST00000583213 SCN9AQ15858 1988 aa20.79■□□□□ 0.92
TNFAIP1-206ENST00000583213 ELL2O00472 640 aaPredicted RBP20.79■□□□□ 0.92
TNFAIP1-206ENST00000583213 PSMD14O00487 310 aa20.79■□□□□ 0.92
TNFAIP1-206ENST00000583213 HSPA8P11142 646 aaKnown RBP20.79■□□□□ 0.92
TNFAIP1-206ENST00000583213 RTL5Q5HYW3 569 aaPredicted RBP20.79■□□□□ 0.92
TNFAIP1-206ENST00000583213 CCDC30Q5VVM6 783 aa20.79■□□□□ 0.92
TNFAIP1-206ENST00000583213 SAPCD2Q86UD0 394 aa20.79■□□□□ 0.92
TNFAIP1-206ENST00000583213 EYA3Q99504 573 aa20.79■□□□□ 0.92
TNFAIP1-206ENST00000583213 RTL9Q8NET4 1388 aa20.79■□□□□ 0.92
TNFAIP1-206ENST00000583213 SHTN1A0MZ66 631 aa20.78■□□□□ 0.92
TNFAIP1-206ENST00000583213 RPS12P25398 132 aaKnown RBP20.78■□□□□ 0.92
TNFAIP1-206ENST00000583213 NCBP3Q53F19 620 aaKnown RBP20.78■□□□□ 0.92
TNFAIP1-206ENST00000583213 MICALL2Q8IY33 904 aa20.78■□□□□ 0.92
TNFAIP1-206ENST00000583213 MYD88Q99836 296 aa20.78■□□□□ 0.92
TNFAIP1-206ENST00000583213 GLIS2Q9BZE0 524 aaPredicted RBP20.78■□□□□ 0.92
TNFAIP1-206ENST00000583213 DBNDD1Q9H9R9 158 aa20.78■□□□□ 0.92
TNFAIP1-206ENST00000583213 CWC25Q9NXE8 425 aaPredicted RBP20.78■□□□□ 0.92
TNFAIP1-206ENST00000583213 PSME4Q14997 1843 aa20.78■□□□□ 0.92
TNFAIP1-206ENST00000583213 CDC37L1Q7L3B6 337 aa20.77■□□□□ 0.92
TNFAIP1-206ENST00000583213 TSPYL6Q8N831 410 aa20.77■□□□□ 0.92
TNFAIP1-206ENST00000583213 SEC31BQ9NQW1 1179 aa20.77■□□□□ 0.92
TNFAIP1-206ENST00000583213 ZBTB12Q9Y330 459 aaPredicted RBP20.77■□□□□ 0.92
TNFAIP1-206ENST00000583213 C6orf229H3BNL8 230 aa20.76■□□□□ 0.91
TNFAIP1-206ENST00000583213 H7C1D1 291 aa20.76■□□□□ 0.91
TNFAIP1-206ENST00000583213 ECE2O60344 883 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms