RNA–Protein interactions for RNA: ENST00000582788.5

ERBB2-212, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-212ENST00000582788 GIGYF2Q6Y7W6 1299 aaKnown RBP20.85■□□□□ 0.93
ERBB2-212ENST00000582788 LOC102724428A0A0B4J2F2 783 aa20.84■□□□□ 0.93
ERBB2-212ENST00000582788 CHMLP26374 656 aa20.84■□□□□ 0.93
ERBB2-212ENST00000582788 ATP6V1AP38606 617 aa20.84■□□□□ 0.93
ERBB2-212ENST00000582788 SIK1P57059 783 aa20.84■□□□□ 0.93
ERBB2-212ENST00000582788 CUL4AQ13619 759 aa20.84■□□□□ 0.93
ERBB2-212ENST00000582788 TRPC5Q9UL62 973 aaPredicted RBP20.84■□□□□ 0.93
ERBB2-212ENST00000582788 TTC41PQ6P2S7 1318 aa20.84■□□□□ 0.93
ERBB2-212ENST00000582788 IL6STP40189 918 aaPredicted RBP20.83■□□□□ 0.93
ERBB2-212ENST00000582788 ANAPC15P60006 121 aa20.83■□□□□ 0.93
ERBB2-212ENST00000582788 AACSQ86V21 672 aa20.83■□□□□ 0.93
ERBB2-212ENST00000582788 EAF2Q96CJ1 260 aaPredicted RBP20.83■□□□□ 0.93
ERBB2-212ENST00000582788 PALLDQ8WX93 1383 aa20.83■□□□□ 0.93
ERBB2-212ENST00000582788 ZSCAN30Q86W11 494 aa20.83■□□□□ 0.92
ERBB2-212ENST00000582788 RBSNQ9H1K0 784 aa20.83■□□□□ 0.92
ERBB2-212ENST00000582788 PALD1Q9ULE6 856 aa20.83■□□□□ 0.92
ERBB2-212ENST00000582788 MAP4K4O95819 1239 aaPredicted RBP20.82■□□□□ 0.92
ERBB2-212ENST00000582788 IFIT2P09913 472 aaKnown RBP20.82■□□□□ 0.92
ERBB2-212ENST00000582788 MCCP23508 829 aa20.82■□□□□ 0.92
ERBB2-212ENST00000582788 RXRBP28702 533 aa20.82■□□□□ 0.92
ERBB2-212ENST00000582788 ITPK1Q13572 414 aa20.82■□□□□ 0.92
ERBB2-212ENST00000582788 INTS5Q6P9B9 1019 aaKnown RBP20.82■□□□□ 0.92
ERBB2-212ENST00000582788 RBM27Q9P2N5 1060 aaKnown RBP20.82■□□□□ 0.92
ERBB2-212ENST00000582788 CICQ96RK0 1608 aaPredicted RBP20.81■□□□□ 0.92
ERBB2-212ENST00000582788 ECHDC1Q9NTX5 307 aa20.81■□□□□ 0.92
ERBB2-212ENST00000582788 CHMP3Q9Y3E7 222 aa20.81■□□□□ 0.92
ERBB2-212ENST00000582788 THSD7AQ9UPZ6 1657 aa20.81■□□□□ 0.92
ERBB2-212ENST00000582788 BRD1O95696 1058 aa20.8■□□□□ 0.92
ERBB2-212ENST00000582788 CRKLP46109 303 aaKnown RBP20.8■□□□□ 0.92
ERBB2-212ENST00000582788 CHAMP1Q96JM3 812 aa20.8■□□□□ 0.92
ERBB2-212ENST00000582788 CCDC8Q9H0W5 538 aaPredicted RBP20.8■□□□□ 0.92
ERBB2-212ENST00000582788 TBC1D2BQ9UPU7 963 aa20.8■□□□□ 0.92
ERBB2-212ENST00000582788 GLRX3O76003 335 aaKnown RBP20.8■□□□□ 0.92
ERBB2-212ENST00000582788 EIF5P55010 431 aaKnown RBP20.8■□□□□ 0.92
ERBB2-212ENST00000582788 RBM6P78332 1123 aaKnown RBP20.8■□□□□ 0.92
ERBB2-212ENST00000582788 DZIP3Q86Y13 1208 aaKnown RBP20.8■□□□□ 0.92
ERBB2-212ENST00000582788 PDLIM2Q96JY6 352 aa20.8■□□□□ 0.92
ERBB2-212ENST00000582788 CCDC87Q9NVE4 849 aa20.8■□□□□ 0.92
ERBB2-212ENST00000582788 TLR7Q9NYK1 1049 aaKnown RBP20.8■□□□□ 0.92
ERBB2-212ENST00000582788 ANKRD36CQ5JPF3 1778 aa20.79■□□□□ 0.92
ERBB2-212ENST00000582788 PCCAP05165 728 aaPredicted RBP20.79■□□□□ 0.92
ERBB2-212ENST00000582788 SMARCC1Q92922 1105 aaPredicted RBP20.79■□□□□ 0.92
ERBB2-212ENST00000582788 FAM89AQ96GI7 184 aa20.79■□□□□ 0.92
ERBB2-212ENST00000582788 INTS4Q96HW7 963 aaKnown RBP20.79■□□□□ 0.92
ERBB2-212ENST00000582788 ANO2Q9NQ90 1003 aa20.79■□□□□ 0.92
ERBB2-212ENST00000582788 TMEM63CQ9P1W3 806 aa20.79■□□□□ 0.92
ERBB2-212ENST00000582788 RREB1Q92766 1687 aa20.79■□□□□ 0.92
ERBB2-212ENST00000582788 NUP98P52948 1817 aa20.78■□□□□ 0.92
ERBB2-212ENST00000582788 GPTP24298 496 aa20.78■□□□□ 0.92
ERBB2-212ENST00000582788 HS1BP3Q53T59 392 aa20.78■□□□□ 0.92
ERBB2-212ENST00000582788 HSP90AB3PQ58FF7 597 aa20.78■□□□□ 0.92
ERBB2-212ENST00000582788 NLRP10Q86W26 655 aa20.78■□□□□ 0.92
ERBB2-212ENST00000582788 ERVV-1B6SEH8 477 aa20.78■□□□□ 0.92
ERBB2-212ENST00000582788 TFCP2Q12800 502 aa20.78■□□□□ 0.92
ERBB2-212ENST00000582788 HSP90AA2PQ14568 343 aaPredicted RBP20.78■□□□□ 0.92
ERBB2-212ENST00000582788 ZBTB38Q8NAP3 1195 aaPredicted RBP20.78■□□□□ 0.92
ERBB2-212ENST00000582788 GPATCH3Q96I76 525 aa20.78■□□□□ 0.92
ERBB2-212ENST00000582788 MBD3O95983 291 aa20.77■□□□□ 0.92
ERBB2-212ENST00000582788 CNTROBQ8N137 903 aa20.77■□□□□ 0.92
ERBB2-212ENST00000582788 NSFL1CQ9UNZ2 370 aaKnown RBP20.77■□□□□ 0.92
ERBB2-212ENST00000582788 MYH14Q7Z406 1995 aaKnown RBP20.77■□□□□ 0.91
ERBB2-212ENST00000582788 EPB41L2O43491 1005 aaKnown RBP20.77■□□□□ 0.91
ERBB2-212ENST00000582788 TPM2P07951 284 aa20.77■□□□□ 0.91
ERBB2-212ENST00000582788 LRSAM1Q6UWE0 723 aa20.77■□□□□ 0.91
ERBB2-212ENST00000582788 PTF1AQ7RTS3 328 aa20.77■□□□□ 0.91
ERBB2-212ENST00000582788 SYNE4Q8N205 404 aa20.76■□□□□ 0.91
ERBB2-212ENST00000582788 GJD4Q96KN9 370 aaPredicted RBP20.76■□□□□ 0.91
ERBB2-212ENST00000582788 TNNI3KQ59H18 835 aa20.75■□□□□ 0.91
ERBB2-212ENST00000582788 FOXD4L5Q5VV16 416 aaPredicted RBP20.75■□□□□ 0.91
ERBB2-212ENST00000582788 ATG9AQ7Z3C6 839 aa20.75■□□□□ 0.91
ERBB2-212ENST00000582788 FOXD4L4Q8WXT5 416 aaPredicted RBP20.75■□□□□ 0.91
ERBB2-212ENST00000582788 PLA2G12BQ9BX93 195 aa20.75■□□□□ 0.91
ERBB2-212ENST00000582788 FPGT-TNNI3KV9GXZ4 949 aa20.75■□□□□ 0.91
ERBB2-212ENST00000582788 COL5A3P25940 1745 aaPredicted RBP20.75■□□□□ 0.91
ERBB2-212ENST00000582788 IL25Q9H293 177 aa20.75■□□□□ 0.91
ERBB2-212ENST00000582788 ZNF594Q96JF6 807 aaPredicted RBP20.74■□□□□ 0.91
ERBB2-212ENST00000582788 CDHR2Q9BYE9 1310 aa20.74■□□□□ 0.91
ERBB2-212ENST00000582788 ZNF831Q5JPB2 1677 aa20.74■□□□□ 0.91
ERBB2-212ENST00000582788 FAM182BQ5T319 152 aa20.73■□□□□ 0.91
ERBB2-212ENST00000582788 ZNF34Q8IZ26 560 aa20.73■□□□□ 0.91
ERBB2-212ENST00000582788 UBN2Q6ZU65 1347 aa20.73■□□□□ 0.91
ERBB2-212ENST00000582788 SYCE3A1L190 88 aa20.73■□□□□ 0.91
ERBB2-212ENST00000582788 DBNLQ9UJU6 430 aaKnown RBP20.73■□□□□ 0.91
ERBB2-212ENST00000582788 OFD1O75665 1012 aa20.72■□□□□ 0.91
ERBB2-212ENST00000582788 CSF1RP07333 972 aa20.72■□□□□ 0.91
ERBB2-212ENST00000582788 HSPA4P34932 840 aa20.72■□□□□ 0.91
ERBB2-212ENST00000582788 LRRC24Q50LG9 513 aa20.72■□□□□ 0.91
ERBB2-212ENST00000582788 MSNP26038 577 aaKnown RBP20.71■□□□□ 0.91
ERBB2-212ENST00000582788 EYA2O00167 538 aa20.71■□□□□ 0.91
ERBB2-212ENST00000582788 NOL8Q76FK4 1167 aaKnown RBP20.71■□□□□ 0.91
ERBB2-212ENST00000582788 LINC00116Q8NCU8 138 aa20.71■□□□□ 0.91
ERBB2-212ENST00000582788 CCDC85AQ96PX6 553 aaPredicted RBP20.71■□□□□ 0.91
ERBB2-212ENST00000582788 UPF3BQ9BZI7 483 aaKnown RBP20.71■□□□□ 0.91
ERBB2-212ENST00000582788 TRMT112Q9UI30 125 aaKnown RBP20.71■□□□□ 0.91
ERBB2-212ENST00000582788 NOL7Q9UMY1 257 aaKnown RBP20.71■□□□□ 0.91
ERBB2-212ENST00000582788 CAMTA2O94983 1202 aa20.7■□□□□ 0.9
ERBB2-212ENST00000582788 IL15P40933 162 aaPredicted RBP20.7■□□□□ 0.9
ERBB2-212ENST00000582788 KCNQ4P56696 695 aa20.7■□□□□ 0.9
ERBB2-212ENST00000582788 CCDC57Q2TAC2 916 aa20.7■□□□□ 0.9
ERBB2-212ENST00000582788 EVI5LQ96CN4 794 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms