RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 ANKRD13DQ6ZTN6 518 aa18.81■□□□□ 0.6
ITGB4-208ENST00000582629 TMC4Q7Z404 712 aa18.81■□□□□ 0.6
ITGB4-208ENST00000582629 ISCA1Q9BUE6 129 aa18.81■□□□□ 0.6
ITGB4-208ENST00000582629 ZNRF3Q9ULT6 936 aa18.81■□□□□ 0.6
ITGB4-208ENST00000582629 TRPM7Q96QT4 1865 aa18.8■□□□□ 0.6
ITGB4-208ENST00000582629 DUSP27Q5VZP5 1158 aa18.8■□□□□ 0.6
ITGB4-208ENST00000582629 HYPKQ9NX55 129 aa18.8■□□□□ 0.6
ITGB4-208ENST00000582629 KIAA2012Q0VF49 1180 aa18.79■□□□□ 0.6
ITGB4-208ENST00000582629 ADARB2Q9NS39 739 aaKnown RBP18.79■□□□□ 0.6
ITGB4-208ENST00000582629 MBIPQ9NS73 344 aa18.79■□□□□ 0.6
ITGB4-208ENST00000582629 GPRC5DQ9NZD1 345 aa18.79■□□□□ 0.6
ITGB4-208ENST00000582629 CXCL9Q07325 125 aa18.78■□□□□ 0.6
ITGB4-208ENST00000582629 DEFB115Q30KQ5 88 aa18.78■□□□□ 0.6
ITGB4-208ENST00000582629 AIDAQ96BJ3 306 aa18.78■□□□□ 0.6
ITGB4-208ENST00000582629 IFT57Q9NWB7 429 aa18.78■□□□□ 0.6
ITGB4-208ENST00000582629 CDHR2Q9BYE9 1310 aa18.77■□□□□ 0.6
ITGB4-208ENST00000582629 DUOX1Q9NRD9 1551 aa18.77■□□□□ 0.6
ITGB4-208ENST00000582629 ATP5J2-PTCD1G3V325 749 aa18.77■□□□□ 0.6
ITGB4-208ENST00000582629 FOXN1O15353 648 aa18.77■□□□□ 0.6
ITGB4-208ENST00000582629 ZNF853P0CG23 659 aa18.77■□□□□ 0.6
ITGB4-208ENST00000582629 CALD1Q05682 793 aaKnown RBP18.77■□□□□ 0.6
ITGB4-208ENST00000582629 SF3B3Q15393 1217 aaKnown RBP18.77■□□□□ 0.6
ITGB4-208ENST00000582629 CIAPIN1Q6FI81 312 aa18.77■□□□□ 0.6
ITGB4-208ENST00000582629 ZNF428Q96B54 188 aa18.77■□□□□ 0.6
ITGB4-208ENST00000582629 FAM89AQ96GI7 184 aa18.77■□□□□ 0.6
ITGB4-208ENST00000582629 ABT1Q9ULW3 272 aaKnown RBP18.77■□□□□ 0.6
ITGB4-208ENST00000582629 APAF1O14727 1248 aa18.76■□□□□ 0.59
ITGB4-208ENST00000582629 CAPN15O75808 1086 aa18.76■□□□□ 0.59
ITGB4-208ENST00000582629 GMPSP49915 693 aaPredicted RBP18.76■□□□□ 0.59
ITGB4-208ENST00000582629 GNAI1P63096 354 aa18.76■□□□□ 0.59
ITGB4-208ENST00000582629 TRIM28Q13263 835 aaKnown RBP18.76■□□□□ 0.59
ITGB4-208ENST00000582629 CTCFP49711 727 aaPredicted RBP18.75■□□□□ 0.59
ITGB4-208ENST00000582629 TNIP1Q15025 636 aa18.75■□□□□ 0.59
ITGB4-208ENST00000582629 PRDM10Q9NQV6 1147 aa18.75■□□□□ 0.59
ITGB4-208ENST00000582629 WDR33Q9C0J8 1336 aaKnown RBP18.74■□□□□ 0.59
ITGB4-208ENST00000582629 GOLGA2Q08379 1002 aa18.74■□□□□ 0.59
ITGB4-208ENST00000582629 RIC3Q7Z5B4 369 aa18.74■□□□□ 0.59
ITGB4-208ENST00000582629 CELF1Q92879 486 aaKnown RBP18.74■□□□□ 0.59
ITGB4-208ENST00000582629 BCL2L13Q9BXK5 485 aa18.74■□□□□ 0.59
ITGB4-208ENST00000582629 WBP1LQ9NX94 342 aa18.74■□□□□ 0.59
ITGB4-208ENST00000582629 IRS4O14654 1257 aaPredicted RBP18.73■□□□□ 0.59
ITGB4-208ENST00000582629 RAD17O75943 681 aa18.73■□□□□ 0.59
ITGB4-208ENST00000582629 FMR1Q06787 632 aaKnown RBP eCLIP18.73■□□□□ 0.59
ITGB4-208ENST00000582629 THSD7BQ9C0I4 1608 aa18.73■□□□□ 0.59
ITGB4-208ENST00000582629 YDJCA8MPS7 323 aa18.72■□□□□ 0.59
ITGB4-208ENST00000582629 TRAF5O00463 557 aa18.72■□□□□ 0.59
ITGB4-208ENST00000582629 NSFL1CQ9UNZ2 370 aaKnown RBP18.72■□□□□ 0.59
ITGB4-208ENST00000582629 COL4A1P02462 1669 aa18.71■□□□□ 0.59
ITGB4-208ENST00000582629 HSP90B1P14625 803 aaKnown RBP18.71■□□□□ 0.59
ITGB4-208ENST00000582629 ECE1P42892 770 aa18.71■□□□□ 0.59
ITGB4-208ENST00000582629 MAP2K1Q02750 393 aaPredicted RBP18.71■□□□□ 0.59
ITGB4-208ENST00000582629 WASHC4Q2M389 1173 aa18.71■□□□□ 0.59
ITGB4-208ENST00000582629 RTL5Q5HYW3 569 aaPredicted RBP18.71■□□□□ 0.59
ITGB4-208ENST00000582629 ZBTB38Q8NAP3 1195 aaPredicted RBP18.71■□□□□ 0.59
ITGB4-208ENST00000582629 ZC3H15Q8WU90 426 aaKnown RBP18.71■□□□□ 0.59
ITGB4-208ENST00000582629 PHAXQ9H814 394 aaKnown RBP18.71■□□□□ 0.59
ITGB4-208ENST00000582629 ELL2O00472 640 aaPredicted RBP18.7■□□□□ 0.58
ITGB4-208ENST00000582629 CST9Q5W186 159 aa18.7■□□□□ 0.58
ITGB4-208ENST00000582629 PAXIP1Q6ZW49 1069 aaPredicted RBP18.7■□□□□ 0.58
ITGB4-208ENST00000582629 CHMP4AQ9BY43 222 aa18.7■□□□□ 0.58
ITGB4-208ENST00000582629 PGAP2Q9UHJ9 254 aa18.7■□□□□ 0.58
ITGB4-208ENST00000582629 TLL2Q9Y6L7 1015 aa18.7■□□□□ 0.58
ITGB4-208ENST00000582629 C6orf229H3BNL8 230 aa18.69■□□□□ 0.58
ITGB4-208ENST00000582629 H7C1D1 291 aa18.69■□□□□ 0.58
ITGB4-208ENST00000582629 RPS8P62241 208 aaKnown RBP18.69■□□□□ 0.58
ITGB4-208ENST00000582629 GPSM2P81274 684 aa18.69■□□□□ 0.58
ITGB4-208ENST00000582629 CAPNS2Q96L46 248 aa18.69■□□□□ 0.58
ITGB4-208ENST00000582629 EYA3Q99504 573 aa18.69■□□□□ 0.58
ITGB4-208ENST00000582629 MYD88Q99836 296 aa18.69■□□□□ 0.58
ITGB4-208ENST00000582629 CNOT7Q9UIV1 285 aaKnown RBP18.69■□□□□ 0.58
ITGB4-208ENST00000582629 RIMBP2O15034 1052 aa18.68■□□□□ 0.58
ITGB4-208ENST00000582629 C8orf58Q8NAV2 365 aa18.68■□□□□ 0.58
ITGB4-208ENST00000582629 CCDC191Q8NCU4 936 aa18.68■□□□□ 0.58
ITGB4-208ENST00000582629 TRPM4Q8TD43 1214 aa18.68■□□□□ 0.58
ITGB4-208ENST00000582629 DPF2Q92785 391 aa18.68■□□□□ 0.58
ITGB4-208ENST00000582629 GLIS2Q9BZE0 524 aaPredicted RBP18.68■□□□□ 0.58
ITGB4-208ENST00000582629 DBNDD1Q9H9R9 158 aa18.68■□□□□ 0.58
ITGB4-208ENST00000582629 POLLQ9UGP5 575 aa18.68■□□□□ 0.58
ITGB4-208ENST00000582629 PSMD14O00487 310 aa18.67■□□□□ 0.58
ITGB4-208ENST00000582629 CELF2O95319 508 aaKnown RBP18.67■□□□□ 0.58
ITGB4-208ENST00000582629 DDX58O95786 925 aaKnown RBP18.67■□□□□ 0.58
ITGB4-208ENST00000582629 PCCAP05165 728 aaPredicted RBP18.67■□□□□ 0.58
ITGB4-208ENST00000582629 HSPA8P11142 646 aaKnown RBP18.67■□□□□ 0.58
ITGB4-208ENST00000582629 LBX1P52954 281 aa18.67■□□□□ 0.58
ITGB4-208ENST00000582629 HIRAP54198 1017 aaPredicted RBP18.67■□□□□ 0.58
ITGB4-208ENST00000582629 CCDC30Q5VVM6 783 aa18.67■□□□□ 0.58
ITGB4-208ENST00000582629 CYP4F22Q6NT55 531 aa18.67■□□□□ 0.58
ITGB4-208ENST00000582629 MICALL2Q8IY33 904 aa18.67■□□□□ 0.58
ITGB4-208ENST00000582629 CWC25Q9NXE8 425 aaPredicted RBP18.67■□□□□ 0.58
ITGB4-208ENST00000582629 ECE2O60344 883 aa18.66■□□□□ 0.58
ITGB4-208ENST00000582629 CCDC152Q4G0S7 254 aa18.66■□□□□ 0.58
ITGB4-208ENST00000582629 CDC37L1Q7L3B6 337 aa18.66■□□□□ 0.58
ITGB4-208ENST00000582629 TBC1D16Q8TBP0 767 aa18.66■□□□□ 0.58
ITGB4-208ENST00000582629 GPR101Q96P66 508 aaPredicted RBP18.66■□□□□ 0.58
ITGB4-208ENST00000582629 METTL22Q9BUU2 404 aaPredicted RBP18.66■□□□□ 0.58
ITGB4-208ENST00000582629 ZBTB12Q9Y330 459 aaPredicted RBP18.66■□□□□ 0.58
ITGB4-208ENST00000582629 SHTN1A0MZ66 631 aa18.65■□□□□ 0.58
ITGB4-208ENST00000582629 RPS12P25398 132 aaKnown RBP18.65■□□□□ 0.58
ITGB4-208ENST00000582629 GRM1Q13255 1194 aa18.65■□□□□ 0.58
ITGB4-208ENST00000582629 SAPCD2Q86UD0 394 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms