RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 OGFRQ9NZT2 677 aa16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 ABCC5O15440 1437 aa16.62■□□□□ 0.25
CSNK1D-217ENST00000581241 MRC2Q9UBG0 1479 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 NBPF11Q86T75 865 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 TBC1D5Q92609 795 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 ARHGAP45Q92619 1136 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 KAT14Q9H8E8 782 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 BMP15O95972 392 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 PRIM1P49642 420 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 MICALL1Q8N3F8 863 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 RTL1A6NKG5 1358 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 MCM6Q14566 821 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 SPTY2D1Q68D10 685 aaPredicted RBP16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 PPP1R42Q7Z4L9 355 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 SLF2Q8IX21 1173 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 ANKS4BQ8N8V4 417 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 EMILIN1Q9Y6C2 1016 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 TTC21BQ7Z4L5 1316 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 UBA7P41226 1012 aa16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 RBM25P49756 843 aaKnown RBP16.61■□□□□ 0.25
CSNK1D-217ENST00000581241 DISP3Q9P2K9 1392 aa16.6■□□□□ 0.25
CSNK1D-217ENST00000581241 MICU3Q86XE3 530 aa16.6■□□□□ 0.25
CSNK1D-217ENST00000581241 USHBP1Q8N6Y0 703 aa16.6■□□□□ 0.25
CSNK1D-217ENST00000581241 TTC21AQ8NDW8 1320 aa16.6■□□□□ 0.25
CSNK1D-217ENST00000581241 RPRD2Q5VT52 1461 aaKnown RBP16.6■□□□□ 0.25
CSNK1D-217ENST00000581241 AKR1B10O60218 316 aa16.6■□□□□ 0.25
CSNK1D-217ENST00000581241 TACC1O75410 805 aa16.6■□□□□ 0.25
CSNK1D-217ENST00000581241 SPAG1Q07617 926 aa16.6■□□□□ 0.25
CSNK1D-217ENST00000581241 CCDC121Q6ZUS5 278 aa16.6■□□□□ 0.25
CSNK1D-217ENST00000581241 PRDM11Q9NQV5 511 aa16.6■□□□□ 0.25
CSNK1D-217ENST00000581241 SNAPC4Q5SXM2 1469 aa16.6■□□□□ 0.25
CSNK1D-217ENST00000581241 CCDC97Q96F63 343 aaPredicted RBP16.6■□□□□ 0.25
CSNK1D-217ENST00000581241 CAPN2P17655 700 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 TSNARE1Q96NA8 513 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 IDEP14735 1019 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 TYRO3Q06418 890 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 VPS18Q9P253 973 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 IKBKGQ9Y6K9 419 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 ANKRD36BQ8N2N9 1353 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 STAT6P42226 847 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 CUL7Q14999 1698 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 FBF1Q8TES7 1133 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 ARHGEF11O15085 1522 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 FERP16591 822 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 HAND2P61296 217 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 KRT83P78385 493 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 RAB11FIP4Q86YS3 637 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 DACT1Q9NYF0 836 aa16.59■□□□□ 0.25
CSNK1D-217ENST00000581241 KLF18A0A0U1RQI7 1052 aa16.58■□□□□ 0.25
CSNK1D-217ENST00000581241 CCDC6Q16204 474 aa16.58■□□□□ 0.25
CSNK1D-217ENST00000581241 SMC5Q8IY18 1101 aa16.58■□□□□ 0.25
CSNK1D-217ENST00000581241 TTC12Q9H892 705 aaPredicted RBP16.58■□□□□ 0.25
CSNK1D-217ENST00000581241 RNF216Q9NWF9 866 aaPredicted RBP16.58■□□□□ 0.25
CSNK1D-217ENST00000581241 ANKIB1Q9P2G1 1089 aa16.58■□□□□ 0.25
CSNK1D-217ENST00000581241 ASXL1Q8IXJ9 1541 aa16.58■□□□□ 0.25
CSNK1D-217ENST00000581241 AFMP43652 599 aa16.58■□□□□ 0.25
CSNK1D-217ENST00000581241 PDE4BQ07343 736 aa16.58■□□□□ 0.25
CSNK1D-217ENST00000581241 SYCP3Q8IZU3 236 aa16.58■□□□□ 0.25
CSNK1D-217ENST00000581241 SCLT1Q96NL6 688 aa16.58■□□□□ 0.25
CSNK1D-217ENST00000581241 ALG1Q9BT22 464 aa16.58■□□□□ 0.25
CSNK1D-217ENST00000581241 TRMT112Q9UI30 125 aaKnown RBP16.58■□□□□ 0.24
CSNK1D-217ENST00000581241 DNM1Q05193 864 aaKnown RBP16.58■□□□□ 0.24
CSNK1D-217ENST00000581241 KRT23Q9C075 422 aa16.58■□□□□ 0.24
CSNK1D-217ENST00000581241 TOPBP1Q92547 1522 aa16.58■□□□□ 0.24
CSNK1D-217ENST00000581241 PRPHP41219 470 aa16.58■□□□□ 0.24
CSNK1D-217ENST00000581241 PLVAPQ9BX97 442 aa16.58■□□□□ 0.24
CSNK1D-217ENST00000581241 IQGAP2Q13576 1575 aa16.58■□□□□ 0.24
CSNK1D-217ENST00000581241 PPP1R14CQ8TAE6 165 aa16.57■□□□□ 0.24
CSNK1D-217ENST00000581241 RHPN1Q8TCX5 695 aa16.57■□□□□ 0.24
CSNK1D-217ENST00000581241 MPRIPQ6WCQ1 1025 aa16.57■□□□□ 0.24
CSNK1D-217ENST00000581241 Q6ZUG5 572 aa16.57■□□□□ 0.24
CSNK1D-217ENST00000581241 ATRIPQ8WXE1 791 aa16.57■□□□□ 0.24
CSNK1D-217ENST00000581241 BRF1Q92994 677 aa16.57■□□□□ 0.24
CSNK1D-217ENST00000581241 WAPLQ7Z5K2 1190 aa16.57■□□□□ 0.24
CSNK1D-217ENST00000581241 SMAP1Q8IYB5 467 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-217ENST00000581241 RBM8AQ9Y5S9 174 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-217ENST00000581241 MAGI1Q96QZ7 1491 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-217ENST00000581241 SREK1Q8WXA9 508 aaKnown RBP16.57■□□□□ 0.24
CSNK1D-217ENST00000581241 FEZ1Q99689 392 aa16.57■□□□□ 0.24
CSNK1D-217ENST00000581241 CWC25Q9NXE8 425 aaPredicted RBP16.57■□□□□ 0.24
CSNK1D-217ENST00000581241 PTGS1P23219 599 aa16.56■□□□□ 0.24
CSNK1D-217ENST00000581241 PDE1AP54750 535 aa16.56■□□□□ 0.24
CSNK1D-217ENST00000581241 ANKLE2Q86XL3 938 aa16.56■□□□□ 0.24
CSNK1D-217ENST00000581241 ANKRD24Q8TF21 1146 aa16.56■□□□□ 0.24
CSNK1D-217ENST00000581241 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.56■□□□□ 0.24
CSNK1D-217ENST00000581241 DNMBPQ6XZF7 1577 aa16.56■□□□□ 0.24
CSNK1D-217ENST00000581241 WTAPQ15007 396 aa16.56■□□□□ 0.24
CSNK1D-217ENST00000581241 FERMT1Q9BQL6 677 aa16.56■□□□□ 0.24
CSNK1D-217ENST00000581241 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.56■□□□□ 0.241e-7■■□□□ 12.2
CSNK1D-217ENST00000581241 V9GYY5 206 aaPredicted RBP16.56■□□□□ 0.24
CSNK1D-217ENST00000581241 ZC3H6P61129 1189 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-217ENST00000581241 PAIP2Q9BPZ3 127 aaKnown RBP16.56■□□□□ 0.24
CSNK1D-217ENST00000581241 TBCAO75347 108 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-217ENST00000581241 LMBR1Q8WVP7 490 aa16.55■□□□□ 0.24
CSNK1D-217ENST00000581241 DRC1Q96MC2 740 aa16.55■□□□□ 0.24
CSNK1D-217ENST00000581241 TTC14Q96N46 770 aa16.55■□□□□ 0.24
CSNK1D-217ENST00000581241 TSPY2A6NKD2 308 aa16.55■□□□□ 0.24
CSNK1D-217ENST00000581241 ZBTB43O43298 467 aa16.55■□□□□ 0.24
CSNK1D-217ENST00000581241 PTCD1O75127 700 aaKnown RBP16.55■□□□□ 0.24
CSNK1D-217ENST00000581241 SELENOSQ9BQE4 189 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms