RNA–Protein interactions for RNA: ENST00000580508.1

RBFOX3-204, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-204ENST00000580508 HDGFL1Q5TGJ6 251 aa28.12■■■□□ 2.09
RBFOX3-204ENST00000580508 DPP8Q6V1X1 898 aaPredicted RBP28.12■■■□□ 2.09
RBFOX3-204ENST00000580508 DDX46Q7L014 1031 aaKnown RBP28.12■■■□□ 2.09
RBFOX3-204ENST00000580508 MPNDQ8N594 471 aa28.12■■■□□ 2.09
RBFOX3-204ENST00000580508 WBP1LQ9NX94 342 aa28.12■■■□□ 2.09
RBFOX3-204ENST00000580508 GPRC5DQ9NZD1 345 aa28.12■■■□□ 2.09
RBFOX3-204ENST00000580508 CAPN15O75808 1086 aa28.11■■■□□ 2.09
RBFOX3-204ENST00000580508 ISCA1Q9BUE6 129 aa28.11■■■□□ 2.09
RBFOX3-204ENST00000580508 ANKRD13DQ6ZTN6 518 aa28.1■■■□□ 2.09
RBFOX3-204ENST00000580508 CFAP44Q96MT7 982 aa28.1■■■□□ 2.09
RBFOX3-204ENST00000580508 PRDM10Q9NQV6 1147 aa28.1■■■□□ 2.09
RBFOX3-204ENST00000580508 DBF4Q9UBU7 674 aaPredicted RBP28.1■■■□□ 2.09
RBFOX3-204ENST00000580508 FMR1Q06787 632 aaKnown RBP eCLIP28.09■■■□□ 2.09
RBFOX3-204ENST00000580508 ADARB2Q9NS39 739 aaKnown RBP28.09■■■□□ 2.09
RBFOX3-204ENST00000580508 THSD7BQ9C0I4 1608 aa28.09■■■□□ 2.09
RBFOX3-204ENST00000580508 TMC4Q7Z404 712 aa28.08■■■□□ 2.09
RBFOX3-204ENST00000580508 CTCFP49711 727 aaPredicted RBP28.07■■■□□ 2.08
RBFOX3-204ENST00000580508 ZNF853P0CG23 659 aa28.06■■■□□ 2.08
RBFOX3-204ENST00000580508 SF3B3Q15393 1217 aaKnown RBP28.06■■■□□ 2.08
RBFOX3-204ENST00000580508 DUSP27Q5VZP5 1158 aa28.06■■■□□ 2.08
RBFOX3-204ENST00000580508 CST9Q5W186 159 aa28.06■■■□□ 2.08
RBFOX3-204ENST00000580508 HYPKQ9NX55 129 aa28.06■■■□□ 2.08
RBFOX3-204ENST00000580508 ABT1Q9ULW3 272 aaKnown RBP28.06■■■□□ 2.08
RBFOX3-204ENST00000580508 CDHR2Q9BYE9 1310 aa28.06■■■□□ 2.08
RBFOX3-204ENST00000580508 WDR33Q9C0J8 1336 aaKnown RBP28.06■■■□□ 2.08
RBFOX3-204ENST00000580508 COL4A1P02462 1669 aa28.05■■■□□ 2.08
RBFOX3-204ENST00000580508 GMPSP49915 693 aaPredicted RBP28.05■■■□□ 2.08
RBFOX3-204ENST00000580508 TRIM28Q13263 835 aaKnown RBP28.05■■■□□ 2.08
RBFOX3-204ENST00000580508 CIAPIN1Q6FI81 312 aa28.05■■■□□ 2.08
RBFOX3-204ENST00000580508 ZNF428Q96B54 188 aa28.05■■■□□ 2.08
RBFOX3-204ENST00000580508 AIDAQ96BJ3 306 aa28.05■■■□□ 2.08
RBFOX3-204ENST00000580508 FAM89AQ96GI7 184 aa28.05■■■□□ 2.08
RBFOX3-204ENST00000580508 PRKRIP1Q9H875 184 aaPredicted RBP28.05■■■□□ 2.08
RBFOX3-204ENST00000580508 MBIPQ9NS73 344 aa28.05■■■□□ 2.08
RBFOX3-204ENST00000580508 TRAF5O00463 557 aa28.04■■■□□ 2.08
RBFOX3-204ENST00000580508 PGAP2Q9UHJ9 254 aa28.04■■■□□ 2.08
RBFOX3-204ENST00000580508 YDJCA8MPS7 323 aa28.03■■■□□ 2.08
RBFOX3-204ENST00000580508 ATP5J2-PTCD1G3V325 749 aa28.03■■■□□ 2.08
RBFOX3-204ENST00000580508 TNIP1Q15025 636 aa28.02■■■□□ 2.08
RBFOX3-204ENST00000580508 CELF1Q92879 486 aaKnown RBP28.02■■■□□ 2.08
RBFOX3-204ENST00000580508 RAD17O75943 681 aa28.01■■■□□ 2.07
RBFOX3-204ENST00000580508 MAP2K1Q02750 393 aaPredicted RBP28■■■□□ 2.07
RBFOX3-204ENST00000580508 TLL2Q9Y6L7 1015 aa28■■■□□ 2.07
RBFOX3-204ENST00000580508 LBX1P52954 281 aa27.99■■■□□ 2.07
RBFOX3-204ENST00000580508 HIRAP54198 1017 aaPredicted RBP27.99■■■□□ 2.07
RBFOX3-204ENST00000580508 ZC3H15Q8WU90 426 aaKnown RBP27.99■■■□□ 2.07
RBFOX3-204ENST00000580508 CAPNS2Q96L46 248 aa27.99■■■□□ 2.07
RBFOX3-204ENST00000580508 HSPA8P11142 646 aaKnown RBP27.98■■■□□ 2.07
RBFOX3-204ENST00000580508 IFT57Q9NWB7 429 aa27.98■■■□□ 2.07
RBFOX3-204ENST00000580508 IRS4O14654 1257 aaPredicted RBP27.97■■■□□ 2.07
RBFOX3-204ENST00000580508 APAF1O14727 1248 aa27.97■■■□□ 2.07
RBFOX3-204ENST00000580508 ECE1P42892 770 aa27.97■■■□□ 2.07
RBFOX3-204ENST00000580508 BCL2L13Q9BXK5 485 aa27.97■■■□□ 2.07
RBFOX3-204ENST00000580508 WASHC4Q2M389 1173 aa27.96■■■□□ 2.07
RBFOX3-204ENST00000580508 CYP4F22Q6NT55 531 aa27.96■■■□□ 2.07
RBFOX3-204ENST00000580508 TRPM4Q8TD43 1214 aa27.96■■■□□ 2.07
RBFOX3-204ENST00000580508 CNOT7Q9UIV1 285 aaKnown RBP27.96■■■□□ 2.07
RBFOX3-204ENST00000580508 NSFL1CQ9UNZ2 370 aaKnown RBP27.96■■■□□ 2.07
RBFOX3-204ENST00000580508 SHTN1A0MZ66 631 aa27.95■■■□□ 2.06
RBFOX3-204ENST00000580508 GNAI1P63096 354 aa27.95■■■□□ 2.06
RBFOX3-204ENST00000580508 RTL5Q5HYW3 569 aaPredicted RBP27.95■■■□□ 2.06
RBFOX3-204ENST00000580508 GLIS2Q9BZE0 524 aaPredicted RBP27.95■■■□□ 2.06
RBFOX3-204ENST00000580508 PHAXQ9H814 394 aaKnown RBP27.95■■■□□ 2.06
RBFOX3-204ENST00000580508 POLLQ9UGP5 575 aa27.95■■■□□ 2.06
RBFOX3-204ENST00000580508 GPSM2P81274 684 aa27.94■■■□□ 2.06
RBFOX3-204ENST00000580508 ZBTB38Q8NAP3 1195 aaPredicted RBP27.94■■■□□ 2.06
RBFOX3-204ENST00000580508 DPF2Q92785 391 aa27.94■■■□□ 2.06
RBFOX3-204ENST00000580508 RPS8P62241 208 aaKnown RBP27.93■■■□□ 2.06
RBFOX3-204ENST00000580508 CALD1Q05682 793 aaKnown RBP27.93■■■□□ 2.06
RBFOX3-204ENST00000580508 GOLGA2Q08379 1002 aa27.93■■■□□ 2.06
RBFOX3-204ENST00000580508 RIC3Q7Z5B4 369 aa27.93■■■□□ 2.06
RBFOX3-204ENST00000580508 SAPCD2Q86UD0 394 aa27.93■■■□□ 2.06
RBFOX3-204ENST00000580508 GPR101Q96P66 508 aaPredicted RBP27.93■■■□□ 2.06
RBFOX3-204ENST00000580508 CELF2O95319 508 aaKnown RBP27.92■■■□□ 2.06
RBFOX3-204ENST00000580508 MICALL2Q8IY33 904 aa27.92■■■□□ 2.06
RBFOX3-204ENST00000580508 HHIPL1Q96JK4 782 aa27.92■■■□□ 2.06
RBFOX3-204ENST00000580508 DBNDD1Q9H9R9 158 aa27.92■■■□□ 2.06
RBFOX3-204ENST00000580508 ZBTB12Q9Y330 459 aaPredicted RBP27.92■■■□□ 2.06
RBFOX3-204ENST00000580508 POLR2AP24928 1970 aaKnown RBP27.91■■■□□ 2.06
RBFOX3-204ENST00000580508 SCN9AQ15858 1988 aa27.91■■■□□ 2.06
RBFOX3-204ENST00000580508 H7C1D1 291 aa27.91■■■□□ 2.06
RBFOX3-204ENST00000580508 PSMD14O00487 310 aa27.91■■■□□ 2.06
RBFOX3-204ENST00000580508 PAXIP1Q6ZW49 1069 aaPredicted RBP27.91■■■□□ 2.06
RBFOX3-204ENST00000580508 CDC37L1Q7L3B6 337 aa27.91■■■□□ 2.06
RBFOX3-204ENST00000580508 C6orf229H3BNL8 230 aa27.9■■■□□ 2.06
RBFOX3-204ENST00000580508 ELL2O00472 640 aaPredicted RBP27.9■■■□□ 2.06
RBFOX3-204ENST00000580508 MAP2K2P36507 400 aa27.9■■■□□ 2.06
RBFOX3-204ENST00000580508 C8orf58Q8NAV2 365 aa27.9■■■□□ 2.06
RBFOX3-204ENST00000580508 TBC1D16Q8TBP0 767 aa27.9■■■□□ 2.06
RBFOX3-204ENST00000580508 RIMBP2O15034 1052 aa27.89■■■□□ 2.06
RBFOX3-204ENST00000580508 CCDC191Q8NCU4 936 aa27.89■■■□□ 2.06
RBFOX3-204ENST00000580508 EYA3Q99504 573 aa27.89■■■□□ 2.06
RBFOX3-204ENST00000580508 PODXL2Q9NZ53 605 aa27.89■■■□□ 2.06
RBFOX3-204ENST00000580508 RTL9Q8NET4 1388 aa27.88■■■□□ 2.05
RBFOX3-204ENST00000580508 ECE2O60344 883 aa27.88■■■□□ 2.05
RBFOX3-204ENST00000580508 PCCAP05165 728 aaPredicted RBP27.88■■■□□ 2.05
RBFOX3-204ENST00000580508 MYD88Q99836 296 aa27.88■■■□□ 2.05
RBFOX3-204ENST00000580508 SEC31BQ9NQW1 1179 aa27.88■■■□□ 2.05
RBFOX3-204ENST00000580508 HSP90B1P14625 803 aaKnown RBP27.87■■■□□ 2.05
RBFOX3-204ENST00000580508 RPS12P25398 132 aaKnown RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms