RNA–Protein interactions for RNA: ENST00000580182.5

PPP4R1-215, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-215ENST00000580182 ATP6V0A2Q9Y487 856 aa23.78■■□□□ 1.4
PPP4R1-215ENST00000580182 TIAM2Q8IVF5 1701 aa23.78■■□□□ 1.4
PPP4R1-215ENST00000580182 CDHR2Q9BYE9 1310 aa23.78■■□□□ 1.4
PPP4R1-215ENST00000580182 H7C1W4 665 aa23.77■■□□□ 1.4
PPP4R1-215ENST00000580182 BBOX1O75936 387 aa23.77■■□□□ 1.4
PPP4R1-215ENST00000580182 BEND3Q5T5X7 828 aa23.77■■□□□ 1.4
PPP4R1-215ENST00000580182 CC2D2BQ6DHV5 1058 aa23.76■■□□□ 1.39
PPP4R1-215ENST00000580182 UBE3BQ7Z3V4 1068 aa23.76■■□□□ 1.39
PPP4R1-215ENST00000580182 SEC31BQ9NQW1 1179 aa23.76■■□□□ 1.39
PPP4R1-215ENST00000580182 DICER1Q9UPY3 1922 aaKnown RBP23.75■■□□□ 1.39
PPP4R1-215ENST00000580182 SLC4A10Q6U841 1118 aa23.75■■□□□ 1.39
PPP4R1-215ENST00000580182 HSP90B1P14625 803 aaKnown RBP23.74■■□□□ 1.39
PPP4R1-215ENST00000580182 CASP7P55210 303 aa23.74■■□□□ 1.39
PPP4R1-215ENST00000580182 SP8Q8IXZ3 490 aa23.74■■□□□ 1.39
PPP4R1-215ENST00000580182 PSMD1Q99460 953 aa23.74■■□□□ 1.39
PPP4R1-215ENST00000580182 NMRK2Q9NPI5 230 aa23.74■■□□□ 1.39
PPP4R1-215ENST00000580182 ALDH1L2Q3SY69 923 aa23.73■■□□□ 1.39
PPP4R1-215ENST00000580182 SMC4Q9NTJ3 1288 aa23.73■■□□□ 1.39
PPP4R1-215ENST00000580182 ZC3H4Q9UPT8 1303 aaKnown RBP23.73■■□□□ 1.39
PPP4R1-215ENST00000580182 IARSP41252 1262 aaKnown RBP23.72■■□□□ 1.39
PPP4R1-215ENST00000580182 CTSWP56202 376 aa23.72■■□□□ 1.39
PPP4R1-215ENST00000580182 CCDC152Q4G0S7 254 aa23.72■■□□□ 1.39
PPP4R1-215ENST00000580182 KIF3CO14782 793 aa23.71■■□□□ 1.39
PPP4R1-215ENST00000580182 CT47B1P0C2W7 299 aaPredicted RBP23.71■■□□□ 1.39
PPP4R1-215ENST00000580182 TTLL11Q8NHH1 800 aa23.71■■□□□ 1.39
PPP4R1-215ENST00000580182 TMX4Q9H1E5 349 aaPredicted RBP23.71■■□□□ 1.39
PPP4R1-215ENST00000580182 PTPRCP08575 1304 aa23.7■■□□□ 1.38
PPP4R1-215ENST00000580182 GLTPD2A6NH11 291 aa23.7■■□□□ 1.38
PPP4R1-215ENST00000580182 RPS8P62241 208 aaKnown RBP23.7■■□□□ 1.38
PPP4R1-215ENST00000580182 GRIPAP1Q4V328 841 aa23.7■■□□□ 1.38
PPP4R1-215ENST00000580182 KDM2BQ8NHM5 1336 aa23.69■■□□□ 1.38
PPP4R1-215ENST00000580182 MPNDQ8N594 471 aa23.69■■□□□ 1.38
PPP4R1-215ENST00000580182 SRCIN1Q9C0H9 1055 aa23.69■■□□□ 1.38
PPP4R1-215ENST00000580182 GREM2Q9H772 168 aa23.69■■□□□ 1.38
PPP4R1-215ENST00000580182 RRAGCQ9HB90 399 aa23.69■■□□□ 1.38
PPP4R1-215ENST00000580182 COL4A5P29400 1685 aa23.69■■□□□ 1.38
PPP4R1-215ENST00000580182 LRRC37AA6NMS7 1700 aa23.68■■□□□ 1.38
PPP4R1-215ENST00000580182 RARSP54136 660 aaKnown RBP23.68■■□□□ 1.38
PPP4R1-215ENST00000580182 DPP8Q6V1X1 898 aaPredicted RBP23.68■■□□□ 1.38
PPP4R1-215ENST00000580182 TMC4Q7Z404 712 aa23.68■■□□□ 1.38
PPP4R1-215ENST00000580182 PLA2G12BQ9BX93 195 aa23.68■■□□□ 1.38
PPP4R1-215ENST00000580182 MYH3P11055 1940 aa23.68■■□□□ 1.38
PPP4R1-215ENST00000580182 ALDH1L1O75891 902 aa23.67■■□□□ 1.38
PPP4R1-215ENST00000580182 RTFDC1Q9BY42 306 aaPredicted RBP23.67■■□□□ 1.38
PPP4R1-215ENST00000580182 ZBED9Q6R2W3 1325 aa23.66■■□□□ 1.38
PPP4R1-215ENST00000580182 GRM8O00222 908 aa23.66■■□□□ 1.38
PPP4R1-215ENST00000580182 DDNO94850 711 aaPredicted RBP23.66■■□□□ 1.38
PPP4R1-215ENST00000580182 GPSM2P81274 684 aa23.66■■□□□ 1.38
PPP4R1-215ENST00000580182 AOC3Q16853 763 aa23.66■■□□□ 1.38
PPP4R1-215ENST00000580182 NOB1Q9ULX3 412 aaKnown RBP23.66■■□□□ 1.38
PPP4R1-215ENST00000580182 ZNF541Q9H0D2 1346 aa23.65■■□□□ 1.38
PPP4R1-215ENST00000580182 C1QTNF8P60827 252 aa23.65■■□□□ 1.38
PPP4R1-215ENST00000580182 DPY19L2Q6NUT2 758 aa23.65■■□□□ 1.38
PPP4R1-215ENST00000580182 LARGE2Q8N3Y3 721 aa23.65■■□□□ 1.38
PPP4R1-215ENST00000580182 NSFL1CQ9UNZ2 370 aaKnown RBP23.65■■□□□ 1.38
PPP4R1-215ENST00000580182 DUOX1Q9NRD9 1551 aa23.65■■□□□ 1.38
PPP4R1-215ENST00000580182 FZD9O00144 591 aa23.64■■□□□ 1.37
PPP4R1-215ENST00000580182 PPIP5K2O43314 1243 aa23.64■■□□□ 1.37
PPP4R1-215ENST00000580182 CSF1RP07333 972 aa23.64■■□□□ 1.37
PPP4R1-215ENST00000580182 FOXO4P98177 505 aa23.64■■□□□ 1.37
PPP4R1-215ENST00000580182 EPHA10Q5JZY3 1008 aa23.64■■□□□ 1.37
PPP4R1-215ENST00000580182 ANKRD18AQ8IVF6 992 aa23.64■■□□□ 1.37
PPP4R1-215ENST00000580182 C9orf78Q9NZ63 289 aaPredicted RBP23.64■■□□□ 1.37
PPP4R1-215ENST00000580182 POTECB2RU33 542 aa23.63■■□□□ 1.37
PPP4R1-215ENST00000580182 FAM161AQ3B820 660 aa23.63■■□□□ 1.37
PPP4R1-215ENST00000580182 SUPT20HQ8NEM7 779 aa23.63■■□□□ 1.37
PPP4R1-215ENST00000580182 JDP2Q8WYK2 163 aa23.63■■□□□ 1.37
PPP4R1-215ENST00000580182 RTL9Q8NET4 1388 aa23.63■■□□□ 1.37
PPP4R1-215ENST00000580182 NBPF7P0C2Y1 421 aaPredicted RBP23.62■■□□□ 1.37
PPP4R1-215ENST00000580182 BRPF1P55201 1214 aaPredicted RBP23.62■■□□□ 1.37
PPP4R1-215ENST00000580182 CDC5LQ99459 802 aaKnown RBP23.62■■□□□ 1.37
PPP4R1-215ENST00000580182 POLLQ9UGP5 575 aa23.62■■□□□ 1.37
PPP4R1-215ENST00000580182 ITGA6P23229 1130 aa23.61■■□□□ 1.37
PPP4R1-215ENST00000580182 GPR101Q96P66 508 aaPredicted RBP23.61■■□□□ 1.37
PPP4R1-215ENST00000580182 SPEF2Q9C093 1822 aa23.61■■□□□ 1.37
PPP4R1-215ENST00000580182 LTBP1Q14766 1721 aa23.6■■□□□ 1.37
PPP4R1-215ENST00000580182 WDR90Q96KV7 1748 aa23.6■■□□□ 1.37
PPP4R1-215ENST00000580182 BCAR3O75815 825 aa23.6■■□□□ 1.37
PPP4R1-215ENST00000580182 SUCLG2Q96I99 432 aa23.6■■□□□ 1.37
PPP4R1-215ENST00000580182 VPS33BQ9H267 617 aa23.6■■□□□ 1.37
PPP4R1-215ENST00000580182 C6orf229H3BNL8 230 aa23.59■■□□□ 1.37
PPP4R1-215ENST00000580182 KIAA2012Q0VF49 1180 aa23.59■■□□□ 1.37
PPP4R1-215ENST00000580182 LMBR1LQ6UX01 489 aa23.59■■□□□ 1.37
PPP4R1-215ENST00000580182 NIM1KQ8IY84 436 aa23.59■■□□□ 1.37
PPP4R1-215ENST00000580182 TBC1D16Q8TBP0 767 aa23.59■■□□□ 1.37
PPP4R1-215ENST00000580182 KAZALD1Q96I82 304 aa23.59■■□□□ 1.37
PPP4R1-215ENST00000580182 UTYO14607 1347 aa23.59■■□□□ 1.37
PPP4R1-215ENST00000580182 RIMBP2O15034 1052 aa23.58■■□□□ 1.37
PPP4R1-215ENST00000580182 VEGFAP15692 232 aaPredicted RBP23.58■■□□□ 1.37
PPP4R1-215ENST00000580182 BSDC1Q9NW68 430 aaPredicted RBP23.58■■□□□ 1.37
PPP4R1-215ENST00000580182 PODXL2Q9NZ53 605 aa23.58■■□□□ 1.37
PPP4R1-215ENST00000580182 ANKIB1Q9P2G1 1089 aa23.58■■□□□ 1.37
PPP4R1-215ENST00000580182 CHMP3Q9Y3E7 222 aa23.58■■□□□ 1.37
PPP4R1-215ENST00000580182 WTIPA6NIX2 430 aaPredicted RBP23.57■■□□□ 1.36
PPP4R1-215ENST00000580182 EIF6P56537 245 aaKnown RBP23.57■■□□□ 1.36
PPP4R1-215ENST00000580182 USP44Q9H0E7 712 aa23.57■■□□□ 1.36
PPP4R1-215ENST00000580182 MINPP1Q9UNW1 487 aa23.57■■□□□ 1.36
PPP4R1-215ENST00000580182 TOMM70O94826 608 aa23.56■■□□□ 1.36
PPP4R1-215ENST00000580182 IGHMBP2P38935 993 aaKnown RBP23.56■■□□□ 1.36
PPP4R1-215ENST00000580182 WASHC4Q2M389 1173 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms